Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 RNU6ATAC38P-201ENST00000408119 126 ntBASIC3.07□□□□□ -1.92
HDGFP51858 MIR3935-201ENST00000583472 104 ntBASIC3.07□□□□□ -1.92
HDGFP51858 WWP1P1-201ENST00000466609 2769 ntBASIC3.07□□□□□ -1.92
HDGFP51858 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HDGFP51858 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HDGFP51858 SNORA25.9-201ENST00000365087 128 ntBASIC3.06□□□□□ -1.92
HDGFP51858 SNORA72.6-201ENST00000384520 129 ntBASIC3.06□□□□□ -1.92
HDGFP51858 RNU6-634P-201ENST00000459134 106 ntBASIC3.06□□□□□ -1.92
HDGFP51858 FGF7P7-201ENST00000514120 227 ntBASIC3.06□□□□□ -1.92
HDGFP51858 MIR3064-201ENST00000581130 66 ntBASIC3.06□□□□□ -1.92
HDGFP51858 AC080100.1-201ENST00000624239 5356 ntBASIC3.05□□□□□ -1.92
HDGFP51858 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HDGFP51858 RNU7-26P-201ENST00000458980 63 ntBASIC3.05□□□□□ -1.92
HDGFP51858 snoU13.2-201ENST00000459201 104 ntBASIC3.05□□□□□ -1.92
HDGFP51858 RNA5SP137-201ENST00000516833 135 ntBASIC3.05□□□□□ -1.92
HDGFP51858 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HDGFP51858 RNU6-203P-201ENST00000384038 104 ntBASIC3.04□□□□□ -1.92
HDGFP51858 RNU6-540P-201ENST00000384622 101 ntBASIC3.04□□□□□ -1.92
HDGFP51858 Y_RNA.660-201ENST00000516002 120 ntBASIC3.04□□□□□ -1.92
HDGFP51858 RNA5SP481-201ENST00000516814 122 ntBASIC3.04□□□□□ -1.92
HDGFP51858 AL449363.1-201ENST00000617815 186 ntBASIC3.04□□□□□ -1.92
HDGFP51858 RNU6-571P-201ENST00000384128 107 ntBASIC3.03□□□□□ -1.92
HDGFP51858 MIR583-201ENST00000384846 75 ntBASIC3.03□□□□□ -1.92
HDGFP51858 MIR588-201ENST00000384900 83 ntBASIC3.03□□□□□ -1.92
HDGFP51858 SNORD77.2-201ENST00000391045 68 ntBASIC3.03□□□□□ -1.92
HDGFP51858 RNU7-106P-201ENST00000459514 67 ntBASIC3.03□□□□□ -1.92
HDGFP51858 Y_RNA.681-201ENST00000516445 113 ntBASIC3.03□□□□□ -1.92
HDGFP51858 AC104996.3-201ENST00000590718 94 ntBASIC3.03□□□□□ -1.92
HDGFP51858 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HDGFP51858 RNU1-17P-201ENST00000363022 152 ntBASIC3.02□□□□□ -1.93
HDGFP51858 RNU6-649P-201ENST00000384463 107 ntBASIC3.02□□□□□ -1.93
HDGFP51858 RNA5SP465-201ENST00000391195 109 ntBASIC3.02□□□□□ -1.93
HDGFP51858 MIR6845-201ENST00000613182 61 ntBASIC3.02□□□□□ -1.93
HDGFP51858 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HDGFP51858 MIRLET7F1-201ENST00000362202 87 ntBASIC3.01□□□□□ -1.93
HDGFP51858 Y_RNA.283-201ENST00000364798 112 ntBASIC3.01□□□□□ -1.93
HDGFP51858 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HDGFP51858 HMGN2P39-201ENST00000398005 273 ntBASIC3.01□□□□□ -1.93
HDGFP51858 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.01□□□□□ -1.93
HDGFP51858 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HDGFP51858 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HDGFP51858 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
HDGFP51858 RNU1-138P-201ENST00000384093 164 ntBASIC3□□□□□ -1.93
HDGFP51858 Y_RNA.491-201ENST00000384417 107 ntBASIC3□□□□□ -1.93
HDGFP51858 snoU13.17-201ENST00000458802 104 ntBASIC3□□□□□ -1.93
HDGFP51858 RNU6-807P-201ENST00000516805 107 ntBASIC3□□□□□ -1.93
HDGFP51858 MIR4498-201ENST00000577599 66 ntBASIC3□□□□□ -1.93
HDGFP51858 MIR6740-201ENST00000618268 113 ntBASIC3□□□□□ -1.93
HDGFP51858 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HDGFP51858 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HDGFP51858 RNU6-208P-201ENST00000362431 107 ntBASIC2.99□□□□□ -1.93
HDGFP51858 RNU5F-1-201ENST00000362507 117 ntBASIC2.99□□□□□ -1.93
HDGFP51858 RNU6-1254P-201ENST00000391266 104 ntBASIC2.99□□□□□ -1.93
HDGFP51858 RNU6-587P-201ENST00000391282 106 ntBASIC2.99□□□□□ -1.93
HDGFP51858 RNA5SP100-201ENST00000410903 110 ntBASIC2.99□□□□□ -1.93
HDGFP51858 RNA5SP59-201ENST00000410922 110 ntBASIC2.99□□□□□ -1.93
HDGFP51858 AC074348.1-201ENST00000426503 132 ntBASIC2.99□□□□□ -1.93
HDGFP51858 SNORA31.15-201ENST00000516771 132 ntBASIC2.99□□□□□ -1.93
HDGFP51858 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.99□□□□□ -1.93
HDGFP51858 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.99□□□□□ -1.93
HDGFP51858 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.99□□□□□ -1.93
HDGFP51858 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HDGFP51858 Y_RNA.205-201ENST00000364128 113 ntBASIC2.98□□□□□ -1.93
HDGFP51858 MIR563-201ENST00000385080 79 ntBASIC2.98□□□□□ -1.93
HDGFP51858 SNORD30.1-201ENST00000391309 70 ntBASIC2.98□□□□□ -1.93
HDGFP51858 MIR1302-7-201ENST00000408841 72 ntBASIC2.98□□□□□ -1.93
HDGFP51858 AC015818.7-201ENST00000428754 109 ntBASIC2.98□□□□□ -1.93
HDGFP51858 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.98□□□□□ -1.93
HDGFP51858 MIR1297-201ENST00000637311 77 ntBASIC2.98□□□□□ -1.93
HDGFP51858 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.97□□□□□ -1.93
HDGFP51858 RNU6-330P-201ENST00000363015 107 ntBASIC2.97□□□□□ -1.93
HDGFP51858 MIR653-201ENST00000385279 96 ntBASIC2.97□□□□□ -1.93
HDGFP51858 RNU6-243P-201ENST00000391140 107 ntBASIC2.97□□□□□ -1.93
HDGFP51858 Z96811.1-201ENST00000445880 108 ntBASIC2.97□□□□□ -1.93
HDGFP51858 MIR3192-201ENST00000584920 77 ntBASIC2.97□□□□□ -1.93
HDGFP51858 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.97□□□□□ -1.93
HDGFP51858 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HDGFP51858 MIR30D-201ENST00000362283 70 ntBASIC2.96□□□□□ -1.94
HDGFP51858 RNU6-957P-201ENST00000363652 99 ntBASIC2.96□□□□□ -1.94
HDGFP51858 Y_RNA.164-201ENST00000363709 102 ntBASIC2.96□□□□□ -1.94
HDGFP51858 SNORD115-31-201ENST00000365318 82 ntBASIC2.96□□□□□ -1.94
HDGFP51858 Y_RNA.596-201ENST00000410462 109 ntBASIC2.96□□□□□ -1.94
HDGFP51858 RNU2-59P-201ENST00000410482 191 ntBASIC2.96□□□□□ -1.94
HDGFP51858 SNORA31.17-201ENST00000516953 127 ntBASIC2.96□□□□□ -1.94
HDGFP51858 RNU6-303P-201ENST00000517091 106 ntBASIC2.96□□□□□ -1.94
HDGFP51858 SNORA31.26-201ENST00000517250 137 ntBASIC2.96□□□□□ -1.94
HDGFP51858 Y_RNA.12-201ENST00000362393 112 ntBASIC2.95□□□□□ -1.94
HDGFP51858 RNU1-51P-201ENST00000365345 176 ntBASIC2.95□□□□□ -1.94
HDGFP51858 RNU6-800P-201ENST00000384473 103 ntBASIC2.95□□□□□ -1.94
HDGFP51858 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HDGFP51858 AC245517.4-201ENST00000448601 281 ntBASIC2.95□□□□□ -1.94
HDGFP51858 RNU6-1053P-201ENST00000515930 101 ntBASIC2.95□□□□□ -1.94
HDGFP51858 uc_338.6-201ENST00000613544 171 ntBASIC2.95□□□□□ -1.94
HDGFP51858 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HDGFP51858 Y_RNA.264-201ENST00000364665 102 ntBASIC2.94□□□□□ -1.94
HDGFP51858 RNU6-1241P-201ENST00000384536 107 ntBASIC2.94□□□□□ -1.94
HDGFP51858 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HDGFP51858 SNORA4-201ENST00000584302 138 ntBASIC2.94□□□□□ -1.94
HDGFP51858 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
HDGFP51858 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms