Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 Y_RNA.120-201ENST00000363304 110 ntBASIC0.51□□□□□ -2.33
NEDD4P46934 SNORA36.2-201ENST00000384004 127 ntBASIC0.51□□□□□ -2.33
NEDD4P46934 U8.15-201ENST00000390947 134 ntBASIC0.51□□□□□ -2.33
NEDD4P46934 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
NEDD4P46934 AC002350.1-201ENST00000490759 375 ntBASIC0.51□□□□□ -2.33
NEDD4P46934 RNU6-1258P-201ENST00000516911 111 ntBASIC0.51□□□□□ -2.33
NEDD4P46934 RNU6-448P-201ENST00000517052 107 ntBASIC0.51□□□□□ -2.33
NEDD4P46934 AC008608.1-201ENST00000603910 127 ntBASIC0.51□□□□□ -2.33
NEDD4P46934 MIR330-201ENST00000362196 94 ntBASIC0.5□□□□□ -2.33
NEDD4P46934 Y_RNA.171-201ENST00000363760 102 ntBASIC0.5□□□□□ -2.33
NEDD4P46934 Y_RNA.272-201ENST00000364696 102 ntBASIC0.5□□□□□ -2.33
NEDD4P46934 MIR140-201ENST00000385282 100 ntBASIC0.5□□□□□ -2.33
NEDD4P46934 AL603914.1-201ENST00000401964 204 ntBASIC0.5□□□□□ -2.33
NEDD4P46934 RNU7-79P-201ENST00000516082 62 ntBASIC0.5□□□□□ -2.33
NEDD4P46934 RNA5SP121-201ENST00000516537 101 ntBASIC0.5□□□□□ -2.33
NEDD4P46934 MIR4305-201ENST00000583252 102 ntBASIC0.5□□□□□ -2.33
NEDD4P46934 MIR8066-201ENST00000617280 78 ntBASIC0.5□□□□□ -2.33
NEDD4P46934 MIR924-201ENST00000638017 53 ntBASIC0.5□□□□□ -2.33
NEDD4P46934 RNA5SP117-201ENST00000365294 118 ntBASIC0.49□□□□□ -2.33
NEDD4P46934 Y_RNA.580-201ENST00000391004 95 ntBASIC0.49□□□□□ -2.33
NEDD4P46934 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.49□□□□□ -2.33
NEDD4P46934 RNU4-54P-201ENST00000516428 129 ntBASIC0.49□□□□□ -2.33
NEDD4P46934 RNA5SP33-201ENST00000516687 98 ntBASIC0.49□□□□□ -2.33
NEDD4P46934 RNU6-765P-201ENST00000516916 99 ntBASIC0.49□□□□□ -2.33
NEDD4P46934 AP003327.1-201ENST00000529684 127 ntBASIC0.49□□□□□ -2.33
NEDD4P46934 AC133485.4-201ENST00000561835 220 ntBASIC0.49□□□□□ -2.33
NEDD4P46934 AC138907.4-201ENST00000570107 226 ntBASIC0.49□□□□□ -2.33
NEDD4P46934 Y_RNA.42-201ENST00000362660 108 ntBASIC0.48□□□□□ -2.33
NEDD4P46934 Y_RNA.251-201ENST00000364551 99 ntBASIC0.48□□□□□ -2.33
NEDD4P46934 Y_RNA.258-201ENST00000364613 105 ntBASIC0.48□□□□□ -2.33
NEDD4P46934 RNY1P13-201ENST00000365030 105 ntBASIC0.48□□□□□ -2.33
NEDD4P46934 Y_RNA.531-201ENST00000384589 121 ntBASIC0.48□□□□□ -2.33
NEDD4P46934 RN7SKP12-201ENST00000516275 143 ntBASIC0.48□□□□□ -2.33
NEDD4P46934 RNA5SP330-201ENST00000517096 96 ntBASIC0.48□□□□□ -2.33
NEDD4P46934 RNU7-35P-201ENST00000517174 62 ntBASIC0.48□□□□□ -2.33
NEDD4P46934 RNU2-60P-201ENST00000517290 128 ntBASIC0.48□□□□□ -2.33
NEDD4P46934 AC112693.2-201ENST00000556538 232 ntBASIC0.48□□□□□ -2.33
NEDD4P46934 MIR6082-201ENST00000613604 109 ntBASIC0.48□□□□□ -2.33
NEDD4P46934 MIR3658-201ENST00000636291 56 ntBASIC0.48□□□□□ -2.33
NEDD4P46934 RNU6-449P-201ENST00000383914 107 ntBASIC0.47□□□□□ -2.33
NEDD4P46934 Y_RNA.588-201ENST00000391254 102 ntBASIC0.47□□□□□ -2.33
NEDD4P46934 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.47□□□□□ -2.33
NEDD4P46934 MIR4491-201ENST00000581087 68 ntBASIC0.47□□□□□ -2.33
NEDD4P46934 AC021443.1-201ENST00000604478 211 ntBASIC0.47□□□□□ -2.33
NEDD4P46934 RNU6-403P-201ENST00000363163 104 ntBASIC0.46□□□□□ -2.34
NEDD4P46934 Y_RNA.299-201ENST00000364973 94 ntBASIC0.46□□□□□ -2.34
NEDD4P46934 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
NEDD4P46934 Y_RNA.470-201ENST00000384307 117 ntBASIC0.46□□□□□ -2.34
NEDD4P46934 RNU6-240P-201ENST00000516098 97 ntBASIC0.46□□□□□ -2.34
NEDD4P46934 Y_RNA.690-201ENST00000516603 95 ntBASIC0.46□□□□□ -2.34
NEDD4P46934 Y_RNA.778-201ENST00000620203 90 ntBASIC0.46□□□□□ -2.34
NEDD4P46934 Y_RNA.13-201ENST00000362403 112 ntBASIC0.45□□□□□ -2.34
NEDD4P46934 VTRNA1-3-201ENST00000365645 89 ntBASIC0.45□□□□□ -2.34
NEDD4P46934 RNU6-945P-201ENST00000383947 107 ntBASIC0.45□□□□□ -2.34
NEDD4P46934 RNU6-394P-201ENST00000410735 107 ntBASIC0.45□□□□□ -2.34
NEDD4P46934 AL512326.2-201ENST00000426359 151 ntBASIC0.45□□□□□ -2.34
NEDD4P46934 RNU2-35P-201ENST00000516446 142 ntBASIC0.45□□□□□ -2.34
NEDD4P46934 AC243829.6-201ENST00000612652 106 ntBASIC0.45□□□□□ -2.34
NEDD4P46934 MIR8087-201ENST00000612745 78 ntBASIC0.45□□□□□ -2.34
NEDD4P46934 RNU4-11P-201ENST00000365287 132 ntBASIC0.44□□□□□ -2.34
NEDD4P46934 AC096949.1-201ENST00000412047 152 ntBASIC0.44□□□□□ -2.34
NEDD4P46934 RNU7-164P-201ENST00000459221 62 ntBASIC0.44□□□□□ -2.34
NEDD4P46934 Y_RNA.651-201ENST00000459380 103 ntBASIC0.44□□□□□ -2.34
NEDD4P46934 RNU6-794P-201ENST00000517261 64 ntBASIC0.44□□□□□ -2.34
NEDD4P46934 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.44□□□□□ -2.34
NEDD4P46934 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
NEDD4P46934 Y_RNA.115-201ENST00000363272 98 ntBASIC0.43□□□□□ -2.34
NEDD4P46934 Y_RNA.174-201ENST00000363781 105 ntBASIC0.43□□□□□ -2.34
NEDD4P46934 RNU6-151P-201ENST00000364158 107 ntBASIC0.43□□□□□ -2.34
NEDD4P46934 RNU6-309P-201ENST00000364573 106 ntBASIC0.43□□□□□ -2.34
NEDD4P46934 AC074198.2-201ENST00000508153 258 ntBASIC0.43□□□□□ -2.34
NEDD4P46934 RNU6-1194P-201ENST00000516208 104 ntBASIC0.43□□□□□ -2.34
NEDD4P46934 FTX_2.1-201ENST00000618816 94 ntBASIC0.43□□□□□ -2.34
NEDD4P46934 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
NEDD4P46934 uc_338.16-201ENST00000621804 95 ntBASIC0.43□□□□□ -2.34
NEDD4P46934 SNORD114-10-201ENST00000363409 72 ntBASIC0.42□□□□□ -2.34
NEDD4P46934 Y_RNA.270-201ENST00000364693 104 ntBASIC0.42□□□□□ -2.34
NEDD4P46934 RNY1P8-201ENST00000383970 114 ntBASIC0.42□□□□□ -2.34
NEDD4P46934 SNORA72.6-201ENST00000384520 129 ntBASIC0.42□□□□□ -2.34
NEDD4P46934 RNU6-469P-201ENST00000516253 101 ntBASIC0.42□□□□□ -2.34
NEDD4P46934 MIR3678-201ENST00000578455 94 ntBASIC0.42□□□□□ -2.34
NEDD4P46934 MIR548AE2-201ENST00000583456 67 ntBASIC0.42□□□□□ -2.34
NEDD4P46934 AC092634.7-201ENST00000621022 103 ntBASIC0.42□□□□□ -2.34
NEDD4P46934 RNY1P11-201ENST00000363759 113 ntBASIC0.41□□□□□ -2.34
NEDD4P46934 Y_RNA.298-201ENST00000364960 107 ntBASIC0.41□□□□□ -2.34
NEDD4P46934 Y_RNA.374-201ENST00000365606 101 ntBASIC0.41□□□□□ -2.34
NEDD4P46934 SNORA32-201ENST00000384072 121 ntBASIC0.41□□□□□ -2.34
NEDD4P46934 RNU6-679P-201ENST00000391003 106 ntBASIC0.41□□□□□ -2.34
NEDD4P46934 MIR513C-201ENST00000401352 84 ntBASIC0.41□□□□□ -2.34
NEDD4P46934 RNU4-69P-201ENST00000410677 143 ntBASIC0.41□□□□□ -2.34
NEDD4P46934 RNU7-197P-201ENST00000458836 62 ntBASIC0.41□□□□□ -2.34
NEDD4P46934 Y_RNA.686-201ENST00000516548 134 ntBASIC0.41□□□□□ -2.34
NEDD4P46934 RNU6-135P-201ENST00000516769 101 ntBASIC0.41□□□□□ -2.34
NEDD4P46934 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.41□□□□□ -2.34
NEDD4P46934 RNU4-58P-201ENST00000363192 141 ntBASIC0.4□□□□□ -2.34
NEDD4P46934 RNU6-886P-201ENST00000384319 105 ntBASIC0.4□□□□□ -2.34
NEDD4P46934 Y_RNA.692-201ENST00000516627 105 ntBASIC0.4□□□□□ -2.34
NEDD4P46934 AL137067.1-201ENST00000615933 120 ntBASIC0.4□□□□□ -2.34
NEDD4P46934 AL109933.3-201ENST00000619095 188 ntBASIC0.4□□□□□ -2.34
NEDD4P46934 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.4□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 234.9 ms