Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 U6.96-201ENST00000636425 70 ntBASIC-1.61□□□□□ -2.67
HTTP42858 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.61□□□□□ -2.67
HTTP42858 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.61□□□□□ -2.67
HTTP42858 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.61□□□□□ -2.67
HTTP42858 MIR517A-201ENST00000385001 87 ntBASIC-1.61□□□□□ -2.67
HTTP42858 RPL35AP4-201ENST00000412007 102 ntBASIC-1.61□□□□□ -2.67
HTTP42858 GPR143P-201ENST00000434155 205 ntBASIC-1.61□□□□□ -2.67
HTTP42858 HSPE1P25-201ENST00000455484 251 ntBASIC-1.61□□□□□ -2.67
HTTP42858 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.61□□□□□ -2.67
HTTP42858 AC024909.2-201ENST00000553035 286 ntBASIC-1.61□□□□□ -2.67
HTTP42858 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.62□□□□□ -2.67
HTTP42858 RNU6-550P-201ENST00000391057 101 ntBASIC-1.62□□□□□ -2.67
HTTP42858 SNORA19.1-201ENST00000410656 129 ntBASIC-1.62□□□□□ -2.67
HTTP42858 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.62□□□□□ -2.67
HTTP42858 RNU6-470P-201ENST00000515954 104 ntBASIC-1.62□□□□□ -2.67
HTTP42858 RNU6-1102P-201ENST00000516149 96 ntBASIC-1.62□□□□□ -2.67
HTTP42858 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.62□□□□□ -2.67
HTTP42858 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.62□□□□□ -2.67
HTTP42858 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.62□□□□□ -2.67
HTTP42858 SNORD50.1-201ENST00000362987 71 ntBASIC-1.62□□□□□ -2.67
HTTP42858 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.62□□□□□ -2.67
HTTP42858 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.62□□□□□ -2.67
HTTP42858 AL603910.2-201ENST00000407268 136 ntBASIC-1.62□□□□□ -2.67
HTTP42858 RNU6-935P-201ENST00000410371 100 ntBASIC-1.62□□□□□ -2.67
HTTP42858 RNU7-115P-201ENST00000516433 55 ntBASIC-1.62□□□□□ -2.67
HTTP42858 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.62□□□□□ -2.67
HTTP42858 MIR3145-201ENST00000580727 82 ntBASIC-1.62□□□□□ -2.67
HTTP42858 MIR5692C1-201ENST00000585309 91 ntBASIC-1.62□□□□□ -2.67
HTTP42858 AC097639.2-201ENST00000603159 172 ntBASIC-1.62□□□□□ -2.67
HTTP42858 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.62□□□□□ -2.67
HTTP42858 RNU6-630P-201ENST00000391258 106 ntBASIC-1.62□□□□□ -2.67
HTTP42858 RNU2-61P-201ENST00000411069 191 ntBASIC-1.62□□□□□ -2.67
HTTP42858 AC097484.2-201ENST00000509147 251 ntBASIC-1.62□□□□□ -2.67
HTTP42858 MIR4696-201ENST00000581431 70 ntBASIC-1.62□□□□□ -2.67
HTTP42858 MIR548W-201ENST00000581970 74 ntBASIC-1.62□□□□□ -2.67
HTTP42858 AL158211.2-201ENST00000607282 395 ntBASIC-1.62□□□□□ -2.67
HTTP42858 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.62□□□□□ -2.67
HTTP42858 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.62□□□□□ -2.67
HTTP42858 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.63□□□□□ -2.67
HTTP42858 MIR5696-201ENST00000578474 85 ntBASIC-1.63□□□□□ -2.67
HTTP42858 MIR6841-201ENST00000637129 72 ntBASIC-1.63□□□□□ -2.67
HTTP42858 RNU6-874P-201ENST00000362390 105 ntBASIC-1.63□□□□□ -2.67
HTTP42858 RNU6-660P-201ENST00000364566 109 ntBASIC-1.63□□□□□ -2.67
HTTP42858 RNU6-260P-201ENST00000384092 107 ntBASIC-1.63□□□□□ -2.67
HTTP42858 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.63□□□□□ -2.67
HTTP42858 SNRPGP8-201ENST00000454064 226 ntBASIC-1.63□□□□□ -2.67
HTTP42858 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.63□□□□□ -2.67
HTTP42858 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.63□□□□□ -2.67
HTTP42858 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-1.63□□□□□ -2.67
HTTP42858 AC092954.2-201ENST00000609103 430 ntBASIC-1.63□□□□□ -2.67
HTTP42858 AC073415.1-201ENST00000449240 153 ntBASIC-1.64□□□□□ -2.67
HTTP42858 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.64□□□□□ -2.67
HTTP42858 RNU7-70P-201ENST00000516941 66 ntBASIC-1.64□□□□□ -2.67
HTTP42858 AL133173.2-201ENST00000614270 90 ntBASIC-1.64□□□□□ -2.67
HTTP42858 AC087741.2-201ENST00000619415 172 ntBASIC-1.64□□□□□ -2.67
HTTP42858 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.64□□□□□ -2.67
HTTP42858 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.64□□□□□ -2.67
HTTP42858 RNU6-74P-201ENST00000384235 107 ntBASIC-1.64□□□□□ -2.67
HTTP42858 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.64□□□□□ -2.67
HTTP42858 RNU6-62P-201ENST00000516526 102 ntBASIC-1.64□□□□□ -2.67
HTTP42858 SCOCP1-201ENST00000554676 349 ntBASIC-1.64□□□□□ -2.67
HTTP42858 MIR548AE2-201ENST00000583456 67 ntBASIC-1.64□□□□□ -2.67
HTTP42858 AP001362.1-201ENST00000625165 124 ntBASIC-1.64□□□□□ -2.67
HTTP42858 AC099654.14-201ENST00000638599 341 ntBASIC-1.64□□□□□ -2.67
HTTP42858 SNORA32-201ENST00000384072 121 ntBASIC-1.64□□□□□ -2.67
HTTP42858 MIR203A-201ENST00000384836 110 ntBASIC-1.64□□□□□ -2.67
HTTP42858 AL033528.1-201ENST00000453780 140 ntBASIC-1.64□□□□□ -2.67
HTTP42858 MIR1270-201ENST00000459320 83 ntBASIC-1.64□□□□□ -2.67
HTTP42858 MIR3129-201ENST00000581095 76 ntBASIC-1.64□□□□□ -2.67
HTTP42858 MIR4775-201ENST00000581168 75 ntBASIC-1.64□□□□□ -2.67
HTTP42858 RNU6-861P-201ENST00000516745 106 ntBASIC-1.65□□□□□ -2.67
HTTP42858 AC060780.3-201ENST00000589464 80 ntBASIC-1.65□□□□□ -2.67
HTTP42858 Z84480.1-201ENST00000605131 311 ntBASIC-1.65□□□□□ -2.67
HTTP42858 MIR8084-201ENST00000614105 89 ntBASIC-1.65□□□□□ -2.67
HTTP42858 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.65□□□□□ -2.67
HTTP42858 RNU6-824P-201ENST00000363724 104 ntBASIC-1.65□□□□□ -2.67
HTTP42858 MIR4662B-201ENST00000579498 81 ntBASIC-1.65□□□□□ -2.67
HTTP42858 RNU6-533P-201ENST00000384144 107 ntBASIC-1.66□□□□□ -2.67
HTTP42858 MIR451A-201ENST00000385059 72 ntBASIC-1.66□□□□□ -2.67
HTTP42858 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.66□□□□□ -2.67
HTTP42858 AP003181.2-201ENST00000528941 181 ntBASIC-1.66□□□□□ -2.67
HTTP42858 MIR4703-201ENST00000577728 79 ntBASIC-1.66□□□□□ -2.67
HTTP42858 U2.17-201ENST00000611454 95 ntBASIC-1.66□□□□□ -2.67
HTTP42858 MIR6509-201ENST00000614603 85 ntBASIC-1.66□□□□□ -2.67
HTTP42858 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.66□□□□□ -2.67
HTTP42858 RNU6-990P-201ENST00000364385 104 ntBASIC-1.66□□□□□ -2.68
HTTP42858 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.66□□□□□ -2.68
HTTP42858 RNY1P6-201ENST00000384193 109 ntBASIC-1.66□□□□□ -2.68
HTTP42858 RNU6-696P-201ENST00000390834 107 ntBASIC-1.66□□□□□ -2.68
HTTP42858 RNU6-101P-201ENST00000410323 104 ntBASIC-1.66□□□□□ -2.68
HTTP42858 RNU2-55P-201ENST00000411146 174 ntBASIC-1.66□□□□□ -2.68
HTTP42858 MTND3P16-201ENST00000452205 344 ntBASIC-1.66□□□□□ -2.68
HTTP42858 RNU7-88P-201ENST00000458752 63 ntBASIC-1.66□□□□□ -2.68
HTTP42858 RNU6-415P-201ENST00000516252 97 ntBASIC-1.66□□□□□ -2.68
HTTP42858 MIR5692C2-201ENST00000577959 77 ntBASIC-1.66□□□□□ -2.68
HTTP42858 MIR379-201ENST00000362218 67 ntBASIC-1.66□□□□□ -2.68
HTTP42858 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.66□□□□□ -2.68
HTTP42858 MIR520D-201ENST00000385002 87 ntBASIC-1.66□□□□□ -2.68
HTTP42858 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.66□□□□□ -2.68
HTTP42858 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.66□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms