Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 Y_RNA.60-201ENST00000362831 98 ntBASIC0.07□□□□□ -2.4
TNFSF9P41273 RNA5SP133-201ENST00000363368 119 ntBASIC0.07□□□□□ -2.4
TNFSF9P41273 RNU6-643P-201ENST00000384018 107 ntBASIC0.07□□□□□ -2.4
TNFSF9P41273 MIR624-201ENST00000385217 97 ntBASIC0.07□□□□□ -2.4
TNFSF9P41273 RNU6-1307P-201ENST00000391012 103 ntBASIC0.07□□□□□ -2.4
TNFSF9P41273 RPL39P25-201ENST00000449384 154 ntBASIC0.07□□□□□ -2.4
TNFSF9P41273 SNORD67.1-201ENST00000516618 108 ntBASIC0.07□□□□□ -2.4
TNFSF9P41273 RNU7-35P-201ENST00000517174 62 ntBASIC0.07□□□□□ -2.4
TNFSF9P41273 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
TNFSF9P41273 AC138749.4-201ENST00000563970 127 ntBASIC0.07□□□□□ -2.4
TNFSF9P41273 MIR548AE2-201ENST00000583456 67 ntBASIC0.07□□□□□ -2.4
TNFSF9P41273 U6.109-201ENST00000636749 87 ntBASIC0.07□□□□□ -2.4
TNFSF9P41273 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.07□□□□□ -2.4
TNFSF9P41273 Y_RNA.120-201ENST00000363304 110 ntBASIC0.06□□□□□ -2.4
TNFSF9P41273 RNU6-103P-201ENST00000363686 107 ntBASIC0.06□□□□□ -2.4
TNFSF9P41273 RNY1P2-201ENST00000364820 117 ntBASIC0.06□□□□□ -2.4
TNFSF9P41273 RNU6-702P-201ENST00000364982 107 ntBASIC0.06□□□□□ -2.4
TNFSF9P41273 MIR643-201ENST00000385267 97 ntBASIC0.06□□□□□ -2.4
TNFSF9P41273 RNU6-918P-201ENST00000391219 106 ntBASIC0.06□□□□□ -2.4
TNFSF9P41273 MIR548H2-201ENST00000408874 88 ntBASIC0.06□□□□□ -2.4
TNFSF9P41273 Y_RNA.668-201ENST00000516233 93 ntBASIC0.06□□□□□ -2.4
TNFSF9P41273 RNU6-111P-201ENST00000517179 105 ntBASIC0.06□□□□□ -2.4
TNFSF9P41273 MIR3152-201ENST00000579801 74 ntBASIC0.06□□□□□ -2.4
TNFSF9P41273 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.06□□□□□ -2.4
TNFSF9P41273 TUG1_4.1-201ENST00000619464 181 ntBASIC0.06□□□□□ -2.4
TNFSF9P41273 MIR499B-201ENST00000636498 73 ntBASIC0.06□□□□□ -2.4
TNFSF9P41273 Y_RNA.145-201ENST00000363527 102 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 RNU6-818P-201ENST00000364837 108 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 RNY1P6-201ENST00000384193 109 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 Y_RNA.454-201ENST00000384224 113 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 SNORA20-201ENST00000384662 132 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 SNORA79-201ENST00000408376 140 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 RNU2-59P-201ENST00000410482 191 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 RNA5SP227-201ENST00000516184 113 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 SCARNA16.5-201ENST00000517114 183 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 AC112693.2-201ENST00000556538 232 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 AC104408.1-201ENST00000605241 170 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 Y_RNA.812-201ENST00000610788 101 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 Y_RNA.784-201ENST00000613803 101 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 Y_RNA.787-201ENST00000616522 101 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 Y_RNA.780-201ENST00000617336 101 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 Y_RNA.801-201ENST00000619005 101 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 MIR3658-201ENST00000636291 56 ntBASIC0.05□□□□□ -2.4
TNFSF9P41273 Y_RNA.49-201ENST00000362714 112 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 SNORD114-5-201ENST00000362928 70 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 RNU6-275P-201ENST00000364910 107 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 RNU6-127P-201ENST00000390897 107 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 SNORD58.1-201ENST00000391313 66 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 MTCYBP9-201ENST00000431021 303 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 RNU6-240P-201ENST00000516098 97 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 RNU6-1194P-201ENST00000516208 104 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 RNA5SP33-201ENST00000516687 98 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 RNU7-137P-201ENST00000516788 62 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 RNU6-765P-201ENST00000516916 99 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 RNU7-70P-201ENST00000516941 66 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 SNORA70.25-201ENST00000612741 95 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 AC141273.2-201ENST00000618989 130 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 MIR4315-1-201ENST00000636800 73 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 MIR4315-2-201ENST00000640925 73 ntBASIC0.04□□□□□ -2.4
TNFSF9P41273 Y_RNA.11-201ENST00000362375 109 ntBASIC0.03□□□□□ -2.4
TNFSF9P41273 Y_RNA.288-201ENST00000364854 92 ntBASIC0.03□□□□□ -2.4
TNFSF9P41273 RNA5SP261-201ENST00000410536 106 ntBASIC0.03□□□□□ -2.4
TNFSF9P41273 Y_RNA.793-201ENST00000411222 111 ntBASIC0.03□□□□□ -2.4
TNFSF9P41273 RNU7-113P-201ENST00000459273 62 ntBASIC0.03□□□□□ -2.4
TNFSF9P41273 RNU7-129P-201ENST00000516128 62 ntBASIC0.03□□□□□ -2.4
TNFSF9P41273 RNU6-1219P-201ENST00000516143 112 ntBASIC0.03□□□□□ -2.4
TNFSF9P41273 RNU6-469P-201ENST00000516253 101 ntBASIC0.03□□□□□ -2.4
TNFSF9P41273 SCARNA15.1-201ENST00000516384 125 ntBASIC0.03□□□□□ -2.4
TNFSF9P41273 RNA5SP285-201ENST00000516619 119 ntBASIC0.03□□□□□ -2.4
TNFSF9P41273 RNU7-161P-201ENST00000517289 62 ntBASIC0.03□□□□□ -2.4
TNFSF9P41273 DEFB131E-201ENST00000532329 154 ntBASIC0.03□□□□□ -2.4
TNFSF9P41273 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
TNFSF9P41273 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.02□□□□□ -2.41
TNFSF9P41273 Y_RNA.20-201ENST00000362479 113 ntBASIC0.02□□□□□ -2.41
TNFSF9P41273 Y_RNA.119-201ENST00000363301 96 ntBASIC0.02□□□□□ -2.41
TNFSF9P41273 Y_RNA.422-201ENST00000384054 114 ntBASIC0.02□□□□□ -2.41
TNFSF9P41273 RNU6-1104P-201ENST00000384723 104 ntBASIC0.02□□□□□ -2.41
TNFSF9P41273 MIR760-201ENST00000390220 80 ntBASIC0.02□□□□□ -2.41
TNFSF9P41273 RNU6-588P-201ENST00000410281 105 ntBASIC0.02□□□□□ -2.41
TNFSF9P41273 RNU5E-9P-201ENST00000411164 104 ntBASIC0.02□□□□□ -2.41
TNFSF9P41273 Y_RNA.651-201ENST00000459380 103 ntBASIC0.02□□□□□ -2.41
TNFSF9P41273 Y_RNA.149-201ENST00000363558 117 ntBASIC0.01□□□□□ -2.41
TNFSF9P41273 Y_RNA.178-201ENST00000363832 102 ntBASIC0.01□□□□□ -2.41
TNFSF9P41273 RNU6-309P-201ENST00000364573 106 ntBASIC0.01□□□□□ -2.41
TNFSF9P41273 Y_RNA.307-201ENST00000365022 117 ntBASIC0.01□□□□□ -2.41
TNFSF9P41273 RNU6-1126P-201ENST00000384002 107 ntBASIC0.01□□□□□ -2.41
TNFSF9P41273 Y_RNA.497-201ENST00000384447 98 ntBASIC0.01□□□□□ -2.41
TNFSF9P41273 RNU4-70P-201ENST00000384579 139 ntBASIC0.01□□□□□ -2.41
TNFSF9P41273 RNU6-1321P-201ENST00000390905 107 ntBASIC0.01□□□□□ -2.41
TNFSF9P41273 RNU6-327P-201ENST00000516270 127 ntBASIC0.01□□□□□ -2.41
TNFSF9P41273 Y_RNA.686-201ENST00000516548 134 ntBASIC0.01□□□□□ -2.41
TNFSF9P41273 MIR3149-201ENST00000584629 83 ntBASIC0.01□□□□□ -2.41
TNFSF9P41273 MIR4768-201ENST00000585270 74 ntBASIC0.01□□□□□ -2.41
TNFSF9P41273 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.01□□□□□ -2.41
TNFSF9P41273 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.01□□□□□ -2.41
TNFSF9P41273 SNORD115-2-201ENST00000362842 82 ntBASIC0□□□□□ -2.41
TNFSF9P41273 Y_RNA.75-201ENST00000362927 97 ntBASIC0□□□□□ -2.41
TNFSF9P41273 Y_RNA.121-201ENST00000363309 113 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms