Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 MT-TR-201ENST00000387439 65 ntBASIC0.72□□□□□ -2.29
APOBEC1P41238 RNU7-102P-201ENST00000458948 62 ntBASIC0.72□□□□□ -2.29
APOBEC1P41238 RNY4P20-201ENST00000516678 93 ntBASIC0.72□□□□□ -2.29
APOBEC1P41238 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
APOBEC1P41238 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
APOBEC1P41238 RNU6-403P-201ENST00000363163 104 ntBASIC0.71□□□□□ -2.3
APOBEC1P41238 RNU6-42P-201ENST00000384165 107 ntBASIC0.71□□□□□ -2.3
APOBEC1P41238 RNU6-110P-201ENST00000384508 104 ntBASIC0.71□□□□□ -2.3
APOBEC1P41238 MIR573-201ENST00000384964 99 ntBASIC0.71□□□□□ -2.3
APOBEC1P41238 MIR518E-201ENST00000385252 88 ntBASIC0.71□□□□□ -2.3
APOBEC1P41238 RNU4-69P-201ENST00000410677 143 ntBASIC0.71□□□□□ -2.3
APOBEC1P41238 AC244098.3-201ENST00000424803 96 ntBASIC0.71□□□□□ -2.3
APOBEC1P41238 RNA5SP272-201ENST00000516095 111 ntBASIC0.71□□□□□ -2.3
APOBEC1P41238 AC013244.2-201ENST00000603396 103 ntBASIC0.71□□□□□ -2.3
APOBEC1P41238 SNORD114-22-201ENST00000365423 72 ntBASIC0.7□□□□□ -2.3
APOBEC1P41238 Y_RNA.568-201ENST00000384742 113 ntBASIC0.7□□□□□ -2.3
APOBEC1P41238 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
APOBEC1P41238 SNORA40-201ENST00000388090 126 ntBASIC0.7□□□□□ -2.3
APOBEC1P41238 SNORD77B-201ENST00000391112 67 ntBASIC0.7□□□□□ -2.3
APOBEC1P41238 AC004941.2-201ENST00000427009 228 ntBASIC0.7□□□□□ -2.3
APOBEC1P41238 RNU6-346P-201ENST00000516288 111 ntBASIC0.7□□□□□ -2.3
APOBEC1P41238 AC090897.1-201ENST00000580909 226 ntBASIC0.7□□□□□ -2.3
APOBEC1P41238 AL589743.1-201ENST00000551932 2712 ntBASIC0.69□□□□□ -2.3
APOBEC1P41238 HSBP1P2-201ENST00000299671 229 ntBASIC0.69□□□□□ -2.3
APOBEC1P41238 Y_RNA.116-201ENST00000363292 103 ntBASIC0.69□□□□□ -2.3
APOBEC1P41238 RNU6-1062P-201ENST00000383908 107 ntBASIC0.69□□□□□ -2.3
APOBEC1P41238 AL158147.1-201ENST00000443970 75 ntBASIC0.69□□□□□ -2.3
APOBEC1P41238 RN7SKP19-201ENST00000516016 252 ntBASIC0.69□□□□□ -2.3
APOBEC1P41238 MIR4491-201ENST00000581087 68 ntBASIC0.69□□□□□ -2.3
APOBEC1P41238 SNORD114-10-201ENST00000363409 72 ntBASIC0.68□□□□□ -2.3
APOBEC1P41238 Y_RNA.294-201ENST00000364916 102 ntBASIC0.68□□□□□ -2.3
APOBEC1P41238 Y_RNA.588-201ENST00000391254 102 ntBASIC0.68□□□□□ -2.3
APOBEC1P41238 RNA5SP136-201ENST00000410906 107 ntBASIC0.68□□□□□ -2.3
APOBEC1P41238 RNA5SP222-201ENST00000411039 105 ntBASIC0.68□□□□□ -2.3
APOBEC1P41238 MTND4LP9-201ENST00000427694 174 ntBASIC0.68□□□□□ -2.3
APOBEC1P41238 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.68□□□□□ -2.3
APOBEC1P41238 AC008608.1-201ENST00000603910 127 ntBASIC0.68□□□□□ -2.3
APOBEC1P41238 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.68□□□□□ -2.3
APOBEC1P41238 Y_RNA.118-201ENST00000363300 101 ntBASIC0.67□□□□□ -2.3
APOBEC1P41238 Y_RNA.280-201ENST00000364765 112 ntBASIC0.67□□□□□ -2.3
APOBEC1P41238 RNU4-45P-201ENST00000365469 141 ntBASIC0.67□□□□□ -2.3
APOBEC1P41238 SNORA72.6-201ENST00000384520 129 ntBASIC0.67□□□□□ -2.3
APOBEC1P41238 MIR759-201ENST00000390224 91 ntBASIC0.67□□□□□ -2.3
APOBEC1P41238 SNORD67.1-201ENST00000516618 108 ntBASIC0.67□□□□□ -2.3
APOBEC1P41238 RNU7-137P-201ENST00000516788 62 ntBASIC0.67□□□□□ -2.3
APOBEC1P41238 RNU6-448P-201ENST00000517052 107 ntBASIC0.67□□□□□ -2.3
APOBEC1P41238 IGKV1-22-201ENST00000524313 326 ntBASIC0.67□□□□□ -2.3
APOBEC1P41238 AC022523.2-201ENST00000561045 150 ntBASIC0.67□□□□□ -2.3
APOBEC1P41238 AC133485.1-201ENST00000567176 124 ntBASIC0.67□□□□□ -2.3
APOBEC1P41238 MIR3612-201ENST00000579753 87 ntBASIC0.67□□□□□ -2.3
APOBEC1P41238 MIR6082-201ENST00000613604 109 ntBASIC0.67□□□□□ -2.3
APOBEC1P41238 MIR8066-201ENST00000617280 78 ntBASIC0.67□□□□□ -2.3
APOBEC1P41238 Y_RNA.13-201ENST00000362403 112 ntBASIC0.66□□□□□ -2.3
APOBEC1P41238 Y_RNA.42-201ENST00000362660 108 ntBASIC0.66□□□□□ -2.3
APOBEC1P41238 Y_RNA.508-201ENST00000384502 114 ntBASIC0.66□□□□□ -2.3
APOBEC1P41238 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.66□□□□□ -2.3
APOBEC1P41238 MIR1263-201ENST00000408324 86 ntBASIC0.66□□□□□ -2.3
APOBEC1P41238 SNORD100-201ENST00000408573 76 ntBASIC0.66□□□□□ -2.3
APOBEC1P41238 AC096949.1-201ENST00000412047 152 ntBASIC0.66□□□□□ -2.3
APOBEC1P41238 Y_RNA.703-201ENST00000516846 111 ntBASIC0.66□□□□□ -2.3
APOBEC1P41238 RNU6-765P-201ENST00000516916 99 ntBASIC0.66□□□□□ -2.3
APOBEC1P41238 AP003327.1-201ENST00000529684 127 ntBASIC0.66□□□□□ -2.3
APOBEC1P41238 RNA5SP117-201ENST00000365294 118 ntBASIC0.65□□□□□ -2.31
APOBEC1P41238 MIR539-201ENST00000365690 78 ntBASIC0.65□□□□□ -2.31
APOBEC1P41238 RNU6-1104P-201ENST00000384723 104 ntBASIC0.65□□□□□ -2.31
APOBEC1P41238 MIR520E-201ENST00000384867 87 ntBASIC0.65□□□□□ -2.31
APOBEC1P41238 RNU6-257P-201ENST00000410238 98 ntBASIC0.65□□□□□ -2.31
APOBEC1P41238 AL606490.4-201ENST00000423117 127 ntBASIC0.65□□□□□ -2.31
APOBEC1P41238 snoU13.18-201ENST00000459483 104 ntBASIC0.65□□□□□ -2.31
APOBEC1P41238 RPS29P1-201ENST00000465274 159 ntBASIC0.65□□□□□ -2.31
APOBEC1P41238 AC002350.1-201ENST00000490759 375 ntBASIC0.65□□□□□ -2.31
APOBEC1P41238 COX6CP6-201ENST00000490840 228 ntBASIC0.65□□□□□ -2.31
APOBEC1P41238 DEFB131E-201ENST00000532329 154 ntBASIC0.65□□□□□ -2.31
APOBEC1P41238 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
APOBEC1P41238 Y_RNA.213-201ENST00000364178 111 ntBASIC0.64□□□□□ -2.31
APOBEC1P41238 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
APOBEC1P41238 Y_RNA.617-201ENST00000410920 90 ntBASIC0.64□□□□□ -2.31
APOBEC1P41238 MIR3163-201ENST00000581592 73 ntBASIC0.64□□□□□ -2.31
APOBEC1P41238 MIR3133-201ENST00000583157 78 ntBASIC0.64□□□□□ -2.31
APOBEC1P41238 AL359881.1-201ENST00000602916 267 ntBASIC0.64□□□□□ -2.31
APOBEC1P41238 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.64□□□□□ -2.31
APOBEC1P41238 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
APOBEC1P41238 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.64□□□□□ -2.31
APOBEC1P41238 MIR18A-201ENST00000362310 71 ntBASIC0.63□□□□□ -2.31
APOBEC1P41238 RNA5SP133-201ENST00000363368 119 ntBASIC0.63□□□□□ -2.31
APOBEC1P41238 Y_RNA.198-201ENST00000364013 98 ntBASIC0.63□□□□□ -2.31
APOBEC1P41238 Y_RNA.355-201ENST00000365462 98 ntBASIC0.63□□□□□ -2.31
APOBEC1P41238 SNORA36.2-201ENST00000384004 127 ntBASIC0.63□□□□□ -2.31
APOBEC1P41238 RNU6-746P-201ENST00000384112 109 ntBASIC0.63□□□□□ -2.31
APOBEC1P41238 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.63□□□□□ -2.31
APOBEC1P41238 MIR1270-201ENST00000459320 83 ntBASIC0.63□□□□□ -2.31
APOBEC1P41238 RNU7-6P-201ENST00000516845 62 ntBASIC0.63□□□□□ -2.31
APOBEC1P41238 RNU6-235P-201ENST00000362644 107 ntBASIC0.62□□□□□ -2.31
APOBEC1P41238 RNU4-58P-201ENST00000363192 141 ntBASIC0.62□□□□□ -2.31
APOBEC1P41238 RNU6-1211P-201ENST00000459179 105 ntBASIC0.62□□□□□ -2.31
APOBEC1P41238 RNU6-1194P-201ENST00000516208 104 ntBASIC0.62□□□□□ -2.31
APOBEC1P41238 SNORA25.16-201ENST00000516741 121 ntBASIC0.62□□□□□ -2.31
APOBEC1P41238 CYP3A137P-201ENST00000562436 69 ntBASIC0.62□□□□□ -2.31
APOBEC1P41238 MIR151B-201ENST00000584249 96 ntBASIC0.62□□□□□ -2.31
APOBEC1P41238 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 298.6 ms