Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MIR4771-1-201ENST00000582617 74 ntBASIC0.77□□□□□ -2.29
HNF4AP41235 MIR6504-201ENST00000613520 61 ntBASIC0.77□□□□□ -2.29
HNF4AP41235 AC023934.1-201ENST00000574529 2389 ntBASIC0.76□□□□□ -2.29
HNF4AP41235 RNU6-1335P-201ENST00000365426 107 ntBASIC0.76□□□□□ -2.29
HNF4AP41235 MIR1827-201ENST00000408549 66 ntBASIC0.76□□□□□ -2.29
HNF4AP41235 RNU6-735P-201ENST00000410612 107 ntBASIC0.76□□□□□ -2.29
HNF4AP41235 RNA5SP136-201ENST00000410906 107 ntBASIC0.76□□□□□ -2.29
HNF4AP41235 AC096949.1-201ENST00000412047 152 ntBASIC0.76□□□□□ -2.29
HNF4AP41235 AC067940.1-201ENST00000458411 300 ntBASIC0.76□□□□□ -2.29
HNF4AP41235 RNU7-185P-201ENST00000459215 60 ntBASIC0.76□□□□□ -2.29
HNF4AP41235 U7.7-201ENST00000459276 60 ntBASIC0.76□□□□□ -2.29
HNF4AP41235 RPS29P1-201ENST00000465274 159 ntBASIC0.76□□□□□ -2.29
HNF4AP41235 RNU6-772P-201ENST00000516042 105 ntBASIC0.76□□□□□ -2.29
HNF4AP41235 RNU6-659P-201ENST00000516454 104 ntBASIC0.76□□□□□ -2.29
HNF4AP41235 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.76□□□□□ -2.29
HNF4AP41235 SNORA4-201ENST00000584302 138 ntBASIC0.76□□□□□ -2.29
HNF4AP41235 MIR1-1-201ENST00000362147 71 ntBASIC0.75□□□□□ -2.29
HNF4AP41235 Y_RNA.191-201ENST00000363972 113 ntBASIC0.75□□□□□ -2.29
HNF4AP41235 Y_RNA.198-201ENST00000364013 98 ntBASIC0.75□□□□□ -2.29
HNF4AP41235 RNU6-949P-201ENST00000384040 107 ntBASIC0.75□□□□□ -2.29
HNF4AP41235 MT-TF-201ENST00000387314 71 ntBASIC0.75□□□□□ -2.29
HNF4AP41235 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.75□□□□□ -2.29
HNF4AP41235 MIR4676-201ENST00000583078 72 ntBASIC0.75□□□□□ -2.29
HNF4AP41235 AL359881.1-201ENST00000602916 267 ntBASIC0.75□□□□□ -2.29
HNF4AP41235 AC025166.1-201ENST00000612411 163 ntBASIC0.75□□□□□ -2.29
HNF4AP41235 AC087741.2-201ENST00000619415 172 ntBASIC0.75□□□□□ -2.29
HNF4AP41235 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
HNF4AP41235 MTND5P18-201ENST00000445624 1801 ntBASIC0.75□□□□□ -2.29
HNF4AP41235 Y_RNA.299-201ENST00000364973 94 ntBASIC0.74□□□□□ -2.29
HNF4AP41235 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
HNF4AP41235 COX6CP6-201ENST00000490840 228 ntBASIC0.74□□□□□ -2.29
HNF4AP41235 Y_RNA.676-201ENST00000516393 96 ntBASIC0.74□□□□□ -2.29
HNF4AP41235 SNORD67.1-201ENST00000516618 108 ntBASIC0.74□□□□□ -2.29
HNF4AP41235 RNU7-6P-201ENST00000516845 62 ntBASIC0.74□□□□□ -2.29
HNF4AP41235 MIR4804-201ENST00000581683 73 ntBASIC0.74□□□□□ -2.29
HNF4AP41235 MIR4452-201ENST00000583004 71 ntBASIC0.74□□□□□ -2.29
HNF4AP41235 AL136317.1-201ENST00000612653 226 ntBASIC0.74□□□□□ -2.29
HNF4AP41235 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.73□□□□□ -2.29
HNF4AP41235 AL157777.2-201ENST00000258070 137 ntBASIC0.73□□□□□ -2.29
HNF4AP41235 Y_RNA.261-201ENST00000364631 102 ntBASIC0.73□□□□□ -2.29
HNF4AP41235 MIR125B2-201ENST00000385128 89 ntBASIC0.73□□□□□ -2.29
HNF4AP41235 SNORD93-201ENST00000408813 74 ntBASIC0.73□□□□□ -2.29
HNF4AP41235 AC004941.2-201ENST00000427009 228 ntBASIC0.73□□□□□ -2.29
HNF4AP41235 RNU7-56P-201ENST00000458744 62 ntBASIC0.73□□□□□ -2.29
HNF4AP41235 RNU6-1110P-201ENST00000516462 101 ntBASIC0.73□□□□□ -2.29
HNF4AP41235 Y_RNA.712-201ENST00000517011 92 ntBASIC0.73□□□□□ -2.29
HNF4AP41235 AL365222.1-201ENST00000614661 98 ntBASIC0.73□□□□□ -2.29
HNF4AP41235 AC132825.6-201ENST00000638861 357 ntBASIC0.73□□□□□ -2.29
HNF4AP41235 Y_RNA.127-201ENST00000363386 109 ntBASIC0.72□□□□□ -2.29
HNF4AP41235 SNORD116-14-201ENST00000383894 92 ntBASIC0.72□□□□□ -2.29
HNF4AP41235 SNORD116-17-201ENST00000383929 92 ntBASIC0.72□□□□□ -2.29
HNF4AP41235 SNORD116-15-201ENST00000384445 92 ntBASIC0.72□□□□□ -2.29
HNF4AP41235 SNORD116-19-201ENST00000384729 92 ntBASIC0.72□□□□□ -2.29
HNF4AP41235 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.72□□□□□ -2.29
HNF4AP41235 RNU6-1333P-201ENST00000516162 93 ntBASIC0.72□□□□□ -2.29
HNF4AP41235 RNU6-977P-201ENST00000516411 103 ntBASIC0.72□□□□□ -2.29
HNF4AP41235 RNU7-137P-201ENST00000516788 62 ntBASIC0.72□□□□□ -2.29
HNF4AP41235 MIR4491-201ENST00000581087 68 ntBASIC0.72□□□□□ -2.29
HNF4AP41235 Y_RNA.773-201ENST00000607168 90 ntBASIC0.72□□□□□ -2.29
HNF4AP41235 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.72□□□□□ -2.29
HNF4AP41235 AC105081.1-201ENST00000617727 106 ntBASIC0.72□□□□□ -2.29
HNF4AP41235 MIR3914-2-201ENST00000637339 95 ntBASIC0.72□□□□□ -2.29
HNF4AP41235 RNU6-616P-201ENST00000384353 107 ntBASIC0.71□□□□□ -2.3
HNF4AP41235 MIR499A-201ENST00000384903 122 ntBASIC0.71□□□□□ -2.3
HNF4AP41235 Y_RNA.588-201ENST00000391254 102 ntBASIC0.71□□□□□ -2.3
HNF4AP41235 MIR1257-201ENST00000408490 117 ntBASIC0.71□□□□□ -2.3
HNF4AP41235 RNU4-61P-201ENST00000411243 107 ntBASIC0.71□□□□□ -2.3
HNF4AP41235 RNU7-156P-201ENST00000517214 74 ntBASIC0.71□□□□□ -2.3
HNF4AP41235 AC008608.1-201ENST00000603910 127 ntBASIC0.71□□□□□ -2.3
HNF4AP41235 RMST_2.1-201ENST00000617263 136 ntBASIC0.71□□□□□ -2.3
HNF4AP41235 SNORD114-10-201ENST00000363409 72 ntBASIC0.7□□□□□ -2.3
HNF4AP41235 Y_RNA.213-201ENST00000364178 111 ntBASIC0.7□□□□□ -2.3
HNF4AP41235 Y_RNA.224-201ENST00000364308 111 ntBASIC0.7□□□□□ -2.3
HNF4AP41235 Y_RNA.346-201ENST00000365385 112 ntBASIC0.7□□□□□ -2.3
HNF4AP41235 MIR520F-201ENST00000384824 87 ntBASIC0.7□□□□□ -2.3
HNF4AP41235 RNU6-1307P-201ENST00000391012 103 ntBASIC0.7□□□□□ -2.3
HNF4AP41235 MIR938-201ENST00000401216 83 ntBASIC0.7□□□□□ -2.3
HNF4AP41235 SNORD99-201ENST00000408612 74 ntBASIC0.7□□□□□ -2.3
HNF4AP41235 RPL39P25-201ENST00000449384 154 ntBASIC0.7□□□□□ -2.3
HNF4AP41235 MIR3163-201ENST00000581592 73 ntBASIC0.7□□□□□ -2.3
HNF4AP41235 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
HNF4AP41235 RNU6-403P-201ENST00000363163 104 ntBASIC0.69□□□□□ -2.3
HNF4AP41235 MIR206-201ENST00000384872 86 ntBASIC0.69□□□□□ -2.3
HNF4AP41235 MIR520H-201ENST00000385126 88 ntBASIC0.69□□□□□ -2.3
HNF4AP41235 SNORD105-201ENST00000386910 85 ntBASIC0.69□□□□□ -2.3
HNF4AP41235 MIR759-201ENST00000390224 91 ntBASIC0.69□□□□□ -2.3
HNF4AP41235 SNORD77B-201ENST00000391112 67 ntBASIC0.69□□□□□ -2.3
HNF4AP41235 RNU4-83P-201ENST00000410863 133 ntBASIC0.69□□□□□ -2.3
HNF4AP41235 RNU7-102P-201ENST00000458948 62 ntBASIC0.69□□□□□ -2.3
HNF4AP41235 RNU6-406P-201ENST00000516470 107 ntBASIC0.69□□□□□ -2.3
HNF4AP41235 SNORD92-201ENST00000585078 85 ntBASIC0.69□□□□□ -2.3
HNF4AP41235 MIR8066-201ENST00000617280 78 ntBASIC0.69□□□□□ -2.3
HNF4AP41235 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.69□□□□□ -2.3
HNF4AP41235 MIR1255B1-201ENST00000636325 63 ntBASIC0.69□□□□□ -2.3
HNF4AP41235 SNORD113-1-201ENST00000365321 69 ntBASIC0.68□□□□□ -2.3
HNF4AP41235 Y_RNA.344-201ENST00000365381 112 ntBASIC0.68□□□□□ -2.3
HNF4AP41235 RNU6-22P-201ENST00000384355 107 ntBASIC0.68□□□□□ -2.3
HNF4AP41235 RNU6-364P-201ENST00000384387 107 ntBASIC0.68□□□□□ -2.3
HNF4AP41235 RNU6-1117P-201ENST00000384525 104 ntBASIC0.68□□□□□ -2.3
HNF4AP41235 MIR548D2-201ENST00000384955 97 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms