Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 RNU6-561P-201ENST00000516222 102 ntBASIC-0.28□□□□□ -2.45
BRCA1P38398 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.28□□□□□ -2.45
BRCA1P38398 MIR4500-201ENST00000579472 76 ntBASIC-0.28□□□□□ -2.45
BRCA1P38398 MIR4677-201ENST00000584153 80 ntBASIC-0.28□□□□□ -2.45
BRCA1P38398 uc_338.28-201ENST00000612082 187 ntBASIC-0.28□□□□□ -2.45
BRCA1P38398 AC021613.1-201ENST00000623880 111 ntBASIC-0.28□□□□□ -2.45
BRCA1P38398 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.29□□□□□ -2.46
BRCA1P38398 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.29□□□□□ -2.46
BRCA1P38398 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.29□□□□□ -2.46
BRCA1P38398 MIR516B1-201ENST00000385211 90 ntBASIC-0.29□□□□□ -2.46
BRCA1P38398 MIR616-201ENST00000385293 97 ntBASIC-0.29□□□□□ -2.46
BRCA1P38398 MT-TD-201ENST00000387419 68 ntBASIC-0.29□□□□□ -2.46
BRCA1P38398 SNORD67.1-201ENST00000516618 108 ntBASIC-0.29□□□□□ -2.46
BRCA1P38398 MIR4744-201ENST00000581563 82 ntBASIC-0.29□□□□□ -2.46
BRCA1P38398 MIR8066-201ENST00000617280 78 ntBASIC-0.29□□□□□ -2.46
BRCA1P38398 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.29□□□□□ -2.46
BRCA1P38398 SNORD114-10-201ENST00000363409 72 ntBASIC-0.29□□□□□ -2.46
BRCA1P38398 SNORA63.5-201ENST00000363548 123 ntBASIC-0.29□□□□□ -2.46
BRCA1P38398 CR383656.4-201ENST00000546909 122 ntBASIC-0.29□□□□□ -2.46
BRCA1P38398 U6.109-201ENST00000636749 87 ntBASIC-0.29□□□□□ -2.46
BRCA1P38398 SNORA75.1-201ENST00000391130 148 ntBASIC-0.3□□□□□ -2.46
BRCA1P38398 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.3□□□□□ -2.46
BRCA1P38398 SNORD4A-201ENST00000459174 72 ntBASIC-0.3□□□□□ -2.46
BRCA1P38398 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.31□□□□□ -2.46
BRCA1P38398 RNU6-474P-201ENST00000384243 107 ntBASIC-0.31□□□□□ -2.46
BRCA1P38398 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.31□□□□□ -2.46
BRCA1P38398 RNU4-16P-201ENST00000364737 141 ntBASIC-0.31□□□□□ -2.46
BRCA1P38398 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.31□□□□□ -2.46
BRCA1P38398 RNU6-30P-201ENST00000384561 107 ntBASIC-0.31□□□□□ -2.46
BRCA1P38398 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.31□□□□□ -2.46
BRCA1P38398 TRAJ51-201ENST00000504127 63 ntBASIC-0.31□□□□□ -2.46
BRCA1P38398 AC006504.6-201ENST00000590142 199 ntBASIC-0.31□□□□□ -2.46
BRCA1P38398 uc_338.10-201ENST00000621872 182 ntBASIC-0.31□□□□□ -2.46
BRCA1P38398 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.32□□□□□ -2.46
BRCA1P38398 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.32□□□□□ -2.46
BRCA1P38398 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.32□□□□□ -2.46
BRCA1P38398 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.32□□□□□ -2.46
BRCA1P38398 SNORD110-201ENST00000408189 75 ntBASIC-0.32□□□□□ -2.46
BRCA1P38398 AC108059.2-201ENST00000434626 151 ntBASIC-0.32□□□□□ -2.46
BRCA1P38398 SUMO1P3-201ENST00000439961 304 ntBASIC-0.32□□□□□ -2.46
BRCA1P38398 SNORD116-25-201ENST00000516517 92 ntBASIC-0.32□□□□□ -2.46
BRCA1P38398 MIR548H5-201ENST00000580314 60 ntBASIC-0.32□□□□□ -2.46
BRCA1P38398 SNORD114-28-201ENST00000363610 72 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 RNU6-103P-201ENST00000363686 107 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 SNORA32.1-201ENST00000364514 115 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 AC244505.6-201ENST00000452829 130 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 SNORA70.25-201ENST00000612741 95 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 AL160413.1-201ENST00000622780 310 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 SNORA22.1-201ENST00000362701 134 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 SNORD41.1-201ENST00000391000 69 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 RNA5SP266-201ENST00000410273 108 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 MIR3171-201ENST00000584270 74 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 AL162726.3-218ENST00000636401 95 ntBASIC-0.33□□□□□ -2.46
BRCA1P38398 RNU4-43P-201ENST00000410628 137 ntBASIC-0.34□□□□□ -2.46
BRCA1P38398 SCARNA15-202ENST00000516881 127 ntBASIC-0.34□□□□□ -2.46
BRCA1P38398 MIR378D2-201ENST00000580636 98 ntBASIC-0.34□□□□□ -2.46
BRCA1P38398 AC009779.6-201ENST00000603972 165 ntBASIC-0.34□□□□□ -2.46
BRCA1P38398 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.35□□□□□ -2.46
BRCA1P38398 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.35□□□□□ -2.46
BRCA1P38398 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.35□□□□□ -2.46
BRCA1P38398 RNU6-291P-201ENST00000384720 107 ntBASIC-0.35□□□□□ -2.46
BRCA1P38398 AC105081.1-201ENST00000617727 106 ntBASIC-0.35□□□□□ -2.46
BRCA1P38398 RNU6-161P-201ENST00000363051 106 ntBASIC-0.35□□□□□ -2.47
BRCA1P38398 NAMPTP3-201ENST00000569273 224 ntBASIC-0.35□□□□□ -2.47
BRCA1P38398 MIR4801-201ENST00000582704 82 ntBASIC-0.35□□□□□ -2.47
BRCA1P38398 RNU7-10P-201ENST00000607194 63 ntBASIC-0.35□□□□□ -2.47
BRCA1P38398 AC011603.4-201ENST00000611325 277 ntBASIC-0.35□□□□□ -2.47
BRCA1P38398 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.35□□□□□ -2.47
BRCA1P38398 SNORD115-2-201ENST00000362842 82 ntBASIC-0.36□□□□□ -2.47
BRCA1P38398 RNU6-818P-201ENST00000364837 108 ntBASIC-0.36□□□□□ -2.47
BRCA1P38398 SNORD115-20-201ENST00000365099 82 ntBASIC-0.36□□□□□ -2.47
BRCA1P38398 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.36□□□□□ -2.47
BRCA1P38398 AC022028.1-201ENST00000412054 408 ntBASIC-0.36□□□□□ -2.47
BRCA1P38398 snoU13.11-201ENST00000459219 104 ntBASIC-0.36□□□□□ -2.47
BRCA1P38398 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.36□□□□□ -2.47
BRCA1P38398 MIR6841-201ENST00000637129 72 ntBASIC-0.36□□□□□ -2.47
BRCA1P38398 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 RNU6-381P-201ENST00000391259 108 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 RNU6-985P-201ENST00000410182 104 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 RNU7-48P-201ENST00000458875 63 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 RNU6-320P-201ENST00000516511 106 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 RNU6-988P-201ENST00000519081 107 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 MIR4643-201ENST00000577473 78 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 MIR4752-201ENST00000579672 72 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 MIR4282-201ENST00000583613 67 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 AC084368.1-201ENST00000620935 65 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 MIR376A2-201ENST00000636782 80 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 SNORD115-24-201ENST00000363528 82 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 RNA5SP236-201ENST00000516169 116 ntBASIC-0.37□□□□□ -2.47
BRCA1P38398 MIR548S-201ENST00000581352 82 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 229 ms