Protein–RNA interactions for Protein: P35625

TIMP3, Metalloproteinase inhibitor 3, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3P35625 AC141846.1-201ENST00000568348 142 ntBASIC0.99□□□□□ -2.25
TIMP3P35625 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.99□□□□□ -2.25
TIMP3P35625 FAM71BP1-201ENST00000604431 523 ntBASIC0.99□□□□□ -2.25
TIMP3P35625 AL662814.1-201ENST00000617364 121 ntBASIC0.99□□□□□ -2.25
TIMP3P35625 SNORD115-19-201ENST00000363098 82 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 SNORD115-18-201ENST00000363293 82 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 Y_RNA.168-201ENST00000363740 102 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 SNORD115-17-201ENST00000364612 82 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 SNORD113.3-201ENST00000364630 78 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 Y_RNA.281-201ENST00000364774 94 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 RNU6-580P-201ENST00000365159 107 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 RNU6-616P-201ENST00000384353 107 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 MIR563-201ENST00000385080 79 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 RNU6-1165P-201ENST00000410119 107 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 MIR1270-201ENST00000459320 83 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 RNU7-21P-201ENST00000459430 62 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 RPL39P34-201ENST00000477141 156 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 SNORD79.1-201ENST00000516069 84 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 Y_RNA.773-201ENST00000607168 90 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 MIR7111-201ENST00000619751 72 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 AL035470.1-201ENST00000622571 220 ntBASIC0.98□□□□□ -2.25
TIMP3P35625 RNA5SP327-201ENST00000362494 101 ntBASIC0.97□□□□□ -2.25
TIMP3P35625 RNY1P13-201ENST00000365030 105 ntBASIC0.97□□□□□ -2.25
TIMP3P35625 MIR1285-1-201ENST00000408593 84 ntBASIC0.97□□□□□ -2.25
TIMP3P35625 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.97□□□□□ -2.25
TIMP3P35625 AL035461.1-201ENST00000421490 332 ntBASIC0.97□□□□□ -2.25
TIMP3P35625 RNU7-90P-201ENST00000459216 62 ntBASIC0.97□□□□□ -2.25
TIMP3P35625 AC036111.3-201ENST00000526389 112 ntBASIC0.97□□□□□ -2.25
TIMP3P35625 AC023827.1-201ENST00000569247 97 ntBASIC0.97□□□□□ -2.25
TIMP3P35625 MIR1255B1-201ENST00000636325 63 ntBASIC0.97□□□□□ -2.25
TIMP3P35625 AC008163.1-202ENST00000636004 2889 ntBASIC0.97□□□□□ -2.25
TIMP3P35625 MIR30D-201ENST00000362283 70 ntBASIC0.96□□□□□ -2.26
TIMP3P35625 Y_RNA.49-201ENST00000362714 112 ntBASIC0.96□□□□□ -2.26
TIMP3P35625 Y_RNA.85-201ENST00000363014 111 ntBASIC0.96□□□□□ -2.26
TIMP3P35625 Y_RNA.118-201ENST00000363300 101 ntBASIC0.96□□□□□ -2.26
TIMP3P35625 Y_RNA.309-201ENST00000365046 111 ntBASIC0.96□□□□□ -2.26
TIMP3P35625 Y_RNA.507-201ENST00000384500 99 ntBASIC0.96□□□□□ -2.26
TIMP3P35625 RNY4P18-201ENST00000391107 89 ntBASIC0.96□□□□□ -2.26
TIMP3P35625 SNORD111-201ENST00000408139 94 ntBASIC0.96□□□□□ -2.26
TIMP3P35625 AC063976.4-201ENST00000421971 163 ntBASIC0.96□□□□□ -2.26
TIMP3P35625 RPL39P25-201ENST00000449384 154 ntBASIC0.96□□□□□ -2.26
TIMP3P35625 SNORD67.1-201ENST00000516618 108 ntBASIC0.96□□□□□ -2.26
TIMP3P35625 SNORA4-201ENST00000584302 138 ntBASIC0.96□□□□□ -2.26
TIMP3P35625 AC012676.2-201ENST00000619258 186 ntBASIC0.96□□□□□ -2.26
TIMP3P35625 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
TIMP3P35625 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
TIMP3P35625 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
TIMP3P35625 SNORD114-10-201ENST00000363409 72 ntBASIC0.95□□□□□ -2.26
TIMP3P35625 RNU6-1107P-201ENST00000364817 104 ntBASIC0.95□□□□□ -2.26
TIMP3P35625 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
TIMP3P35625 RNU6-949P-201ENST00000384040 107 ntBASIC0.95□□□□□ -2.26
TIMP3P35625 SNORA25-201ENST00000384384 134 ntBASIC0.95□□□□□ -2.26
TIMP3P35625 MT-TF-201ENST00000387314 71 ntBASIC0.95□□□□□ -2.26
TIMP3P35625 RNU6-816P-201ENST00000390914 107 ntBASIC0.95□□□□□ -2.26
TIMP3P35625 SNORD12-201ENST00000391002 90 ntBASIC0.95□□□□□ -2.26
TIMP3P35625 RNU6-1268P-201ENST00000391214 107 ntBASIC0.95□□□□□ -2.26
TIMP3P35625 RNU6-1239P-201ENST00000391310 107 ntBASIC0.95□□□□□ -2.26
TIMP3P35625 MIR1912-201ENST00000410389 80 ntBASIC0.95□□□□□ -2.26
TIMP3P35625 MIR18B-201ENST00000454574 71 ntBASIC0.95□□□□□ -2.26
TIMP3P35625 AC068339.1-201ENST00000526965 141 ntBASIC0.95□□□□□ -2.26
TIMP3P35625 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.95□□□□□ -2.26
TIMP3P35625 uc_338.6-201ENST00000613544 171 ntBASIC0.95□□□□□ -2.26
TIMP3P35625 AC106800.4-201ENST00000614905 153 ntBASIC0.95□□□□□ -2.26
TIMP3P35625 AL162726.3-218ENST00000636401 95 ntBASIC0.95□□□□□ -2.26
TIMP3P35625 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.95□□□□□ -2.26
TIMP3P35625 RNU6-363P-201ENST00000362895 105 ntBASIC0.94□□□□□ -2.26
TIMP3P35625 Y_RNA.155-201ENST00000363632 101 ntBASIC0.94□□□□□ -2.26
TIMP3P35625 RNU4-67P-201ENST00000364569 141 ntBASIC0.94□□□□□ -2.26
TIMP3P35625 SNORD115-35-201ENST00000365122 82 ntBASIC0.94□□□□□ -2.26
TIMP3P35625 RNU6-44P-201ENST00000384045 107 ntBASIC0.94□□□□□ -2.26
TIMP3P35625 MIR206-201ENST00000384872 86 ntBASIC0.94□□□□□ -2.26
TIMP3P35625 snoU13.18-201ENST00000459483 104 ntBASIC0.94□□□□□ -2.26
TIMP3P35625 RNU7-2P-201ENST00000516096 62 ntBASIC0.94□□□□□ -2.26
TIMP3P35625 RNU7-137P-201ENST00000516788 62 ntBASIC0.94□□□□□ -2.26
TIMP3P35625 AC105081.1-201ENST00000617727 106 ntBASIC0.94□□□□□ -2.26
TIMP3P35625 SNORD114-27-201ENST00000363766 70 ntBASIC0.93□□□□□ -2.26
TIMP3P35625 U8.6-201ENST00000364939 135 ntBASIC0.93□□□□□ -2.26
TIMP3P35625 RNU6-934P-201ENST00000365154 107 ntBASIC0.93□□□□□ -2.26
TIMP3P35625 RNU6-1014P-201ENST00000383940 103 ntBASIC0.93□□□□□ -2.26
TIMP3P35625 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
TIMP3P35625 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.93□□□□□ -2.26
TIMP3P35625 SNORA7.5-201ENST00000410672 110 ntBASIC0.93□□□□□ -2.26
TIMP3P35625 SNORD83.1-201ENST00000411362 77 ntBASIC0.93□□□□□ -2.26
TIMP3P35625 AC002429.1-201ENST00000437672 148 ntBASIC0.93□□□□□ -2.26
TIMP3P35625 snoU13.21-201ENST00000459368 105 ntBASIC0.93□□□□□ -2.26
TIMP3P35625 RNA5SP220-201ENST00000516298 104 ntBASIC0.93□□□□□ -2.26
TIMP3P35625 RNU6-521P-201ENST00000516663 105 ntBASIC0.93□□□□□ -2.26
TIMP3P35625 MIR5009-201ENST00000578736 100 ntBASIC0.93□□□□□ -2.26
TIMP3P35625 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
TIMP3P35625 Y_RNA.323-201ENST00000365157 109 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 RNU6-409P-201ENST00000384114 104 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 RNU6-42P-201ENST00000384165 107 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 U8.15-201ENST00000390947 134 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 RNU6-447P-201ENST00000410293 104 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 RNU6-1118P-201ENST00000410382 104 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 RNU6-1076P-201ENST00000410397 104 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 RNU6-355P-201ENST00000410427 104 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 RNU6-791P-201ENST00000410467 104 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 RNU6-994P-201ENST00000410507 111 ntBASIC0.92□□□□□ -2.26
TIMP3P35625 RNU6-705P-201ENST00000410601 104 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms