Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 RNU11-2P-201ENST00000516898 142 ntBASIC1.09□□□□□ -2.23
KRT9P35527 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.09□□□□□ -2.23
KRT9P35527 AC004812.1-201ENST00000540773 146 ntBASIC1.09□□□□□ -2.23
KRT9P35527 AC023827.1-201ENST00000569247 97 ntBASIC1.09□□□□□ -2.23
KRT9P35527 AL020996.3-201ENST00000606617 222 ntBASIC1.09□□□□□ -2.23
KRT9P35527 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.09□□□□□ -2.23
KRT9P35527 Y_RNA.299-201ENST00000364973 94 ntBASIC1.08□□□□□ -2.24
KRT9P35527 RNU6-147P-201ENST00000383983 107 ntBASIC1.08□□□□□ -2.24
KRT9P35527 MIR1302-7-201ENST00000408841 72 ntBASIC1.08□□□□□ -2.24
KRT9P35527 snoU13.16-201ENST00000459350 104 ntBASIC1.08□□□□□ -2.24
KRT9P35527 AC022523.2-201ENST00000561045 150 ntBASIC1.08□□□□□ -2.24
KRT9P35527 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.08□□□□□ -2.24
KRT9P35527 AC022709.1-201ENST00000615967 87 ntBASIC1.08□□□□□ -2.24
KRT9P35527 PVT1_3.1-201ENST00000620853 95 ntBASIC1.08□□□□□ -2.24
KRT9P35527 SNORA22.1-201ENST00000362701 134 ntBASIC1.07□□□□□ -2.24
KRT9P35527 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
KRT9P35527 SNORA1.1-201ENST00000364671 133 ntBASIC1.07□□□□□ -2.24
KRT9P35527 Y_RNA.309-201ENST00000365046 111 ntBASIC1.07□□□□□ -2.24
KRT9P35527 Y_RNA.354-201ENST00000365448 111 ntBASIC1.07□□□□□ -2.24
KRT9P35527 Y_RNA.362-201ENST00000365518 110 ntBASIC1.07□□□□□ -2.24
KRT9P35527 RNU6-1014P-201ENST00000383940 103 ntBASIC1.07□□□□□ -2.24
KRT9P35527 MIR548D2-201ENST00000384955 97 ntBASIC1.07□□□□□ -2.24
KRT9P35527 MT-TI-201ENST00000387365 69 ntBASIC1.07□□□□□ -2.24
KRT9P35527 RNU6-913P-201ENST00000390913 95 ntBASIC1.07□□□□□ -2.24
KRT9P35527 RPS3AP1-201ENST00000413190 320 ntBASIC1.07□□□□□ -2.24
KRT9P35527 POLR2J4-204ENST00000418424 324 ntBASIC1.07□□□□□ -2.24
KRT9P35527 RPL39P34-201ENST00000477141 156 ntBASIC1.07□□□□□ -2.24
KRT9P35527 RNA5SP33-201ENST00000516687 98 ntBASIC1.07□□□□□ -2.24
KRT9P35527 MIR3613-201ENST00000579844 87 ntBASIC1.07□□□□□ -2.24
KRT9P35527 MIR6717-201ENST00000622747 73 ntBASIC1.07□□□□□ -2.24
KRT9P35527 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
KRT9P35527 Y_RNA.171-201ENST00000363760 102 ntBASIC1.06□□□□□ -2.24
KRT9P35527 Y_RNA.430-201ENST00000384081 110 ntBASIC1.06□□□□□ -2.24
KRT9P35527 RNU6-1113P-201ENST00000384348 107 ntBASIC1.06□□□□□ -2.24
KRT9P35527 RNU6-106P-201ENST00000384405 107 ntBASIC1.06□□□□□ -2.24
KRT9P35527 Y_RNA.540-201ENST00000384638 111 ntBASIC1.06□□□□□ -2.24
KRT9P35527 RNU4-69P-201ENST00000410677 143 ntBASIC1.06□□□□□ -2.24
KRT9P35527 AC068339.1-201ENST00000526965 141 ntBASIC1.06□□□□□ -2.24
KRT9P35527 uc_338.28-201ENST00000612082 187 ntBASIC1.06□□□□□ -2.24
KRT9P35527 AL035470.1-201ENST00000622571 220 ntBASIC1.06□□□□□ -2.24
KRT9P35527 MIR6767-201ENST00000637302 66 ntBASIC1.06□□□□□ -2.24
KRT9P35527 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRT9P35527 MIR450A1-201ENST00000362262 91 ntBASIC1.05□□□□□ -2.24
KRT9P35527 SNORD115-2-201ENST00000362842 82 ntBASIC1.05□□□□□ -2.24
KRT9P35527 Y_RNA.163-201ENST00000363702 113 ntBASIC1.05□□□□□ -2.24
KRT9P35527 SNORD115-20-201ENST00000365099 82 ntBASIC1.05□□□□□ -2.24
KRT9P35527 Y_RNA.323-201ENST00000365157 109 ntBASIC1.05□□□□□ -2.24
KRT9P35527 Y_RNA.344-201ENST00000365381 112 ntBASIC1.05□□□□□ -2.24
KRT9P35527 RNU6-32P-201ENST00000383948 107 ntBASIC1.05□□□□□ -2.24
KRT9P35527 RNU6-13P-201ENST00000384248 107 ntBASIC1.05□□□□□ -2.24
KRT9P35527 RNU6-12P-201ENST00000384604 107 ntBASIC1.05□□□□□ -2.24
KRT9P35527 RNU6-41P-201ENST00000384741 107 ntBASIC1.05□□□□□ -2.24
KRT9P35527 SNORD77B-201ENST00000391112 67 ntBASIC1.05□□□□□ -2.24
KRT9P35527 SNORA26.6-201ENST00000391256 115 ntBASIC1.05□□□□□ -2.24
KRT9P35527 FABP5P4-201ENST00000437203 171 ntBASIC1.05□□□□□ -2.24
KRT9P35527 RPL39P25-201ENST00000449384 154 ntBASIC1.05□□□□□ -2.24
KRT9P35527 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.05□□□□□ -2.24
KRT9P35527 AC113410.1-201ENST00000505029 247 ntBASIC1.05□□□□□ -2.24
KRT9P35527 MIR5009-201ENST00000578736 100 ntBASIC1.05□□□□□ -2.24
KRT9P35527 MIR8055-201ENST00000610739 97 ntBASIC1.05□□□□□ -2.24
KRT9P35527 MIR6516-201ENST00000630554 81 ntBASIC1.05□□□□□ -2.24
KRT9P35527 RNU1-93P-201ENST00000364704 169 ntBASIC1.04□□□□□ -2.24
KRT9P35527 U8.6-201ENST00000364939 135 ntBASIC1.04□□□□□ -2.24
KRT9P35527 RNU6-756P-201ENST00000383997 107 ntBASIC1.04□□□□□ -2.24
KRT9P35527 SNORA51.5-201ENST00000384126 131 ntBASIC1.04□□□□□ -2.24
KRT9P35527 Y_RNA.495-201ENST00000384435 112 ntBASIC1.04□□□□□ -2.24
KRT9P35527 Y_RNA.507-201ENST00000384500 99 ntBASIC1.04□□□□□ -2.24
KRT9P35527 MIR548J-201ENST00000408833 112 ntBASIC1.04□□□□□ -2.24
KRT9P35527 MIR1912-201ENST00000410389 80 ntBASIC1.04□□□□□ -2.24
KRT9P35527 RNU6-554P-201ENST00000410466 106 ntBASIC1.04□□□□□ -2.24
KRT9P35527 RNU6-1190P-201ENST00000410811 104 ntBASIC1.04□□□□□ -2.24
KRT9P35527 HMGN1P33-201ENST00000432945 451 ntBASIC1.04□□□□□ -2.24
KRT9P35527 RNU6-168P-201ENST00000516189 101 ntBASIC1.04□□□□□ -2.24
KRT9P35527 RNU6-1258P-201ENST00000516911 111 ntBASIC1.04□□□□□ -2.24
KRT9P35527 RNU6-94P-201ENST00000607728 107 ntBASIC1.04□□□□□ -2.24
KRT9P35527 Y_RNA.205-201ENST00000364128 113 ntBASIC1.03□□□□□ -2.24
KRT9P35527 RNU6-654P-201ENST00000364373 107 ntBASIC1.03□□□□□ -2.24
KRT9P35527 RNU1-36P-201ENST00000365130 165 ntBASIC1.03□□□□□ -2.24
KRT9P35527 RNU6-816P-201ENST00000390914 107 ntBASIC1.03□□□□□ -2.24
KRT9P35527 RNU6-1268P-201ENST00000391214 107 ntBASIC1.03□□□□□ -2.24
KRT9P35527 RNU6-1239P-201ENST00000391310 107 ntBASIC1.03□□□□□ -2.24
KRT9P35527 RNA5SP89-201ENST00000410300 108 ntBASIC1.03□□□□□ -2.24
KRT9P35527 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.03□□□□□ -2.24
KRT9P35527 AC036111.3-201ENST00000526389 112 ntBASIC1.03□□□□□ -2.24
KRT9P35527 AC106800.4-201ENST00000614905 153 ntBASIC1.03□□□□□ -2.24
KRT9P35527 AC087741.2-201ENST00000619415 172 ntBASIC1.03□□□□□ -2.24
KRT9P35527 AL162726.3-218ENST00000636401 95 ntBASIC1.03□□□□□ -2.24
KRT9P35527 MIR6841-201ENST00000637129 72 ntBASIC1.03□□□□□ -2.24
KRT9P35527 RNU6-766P-201ENST00000362478 107 ntBASIC1.02□□□□□ -2.25
KRT9P35527 Y_RNA.470-201ENST00000384307 117 ntBASIC1.02□□□□□ -2.25
KRT9P35527 SNORD38B-201ENST00000384690 67 ntBASIC1.02□□□□□ -2.25
KRT9P35527 ACA64.5-201ENST00000516207 127 ntBASIC1.02□□□□□ -2.25
KRT9P35527 RNA5SP255-201ENST00000516370 107 ntBASIC1.02□□□□□ -2.25
KRT9P35527 MIR2115-201ENST00000516657 100 ntBASIC1.02□□□□□ -2.25
KRT9P35527 RNU6-537P-201ENST00000517277 103 ntBASIC1.02□□□□□ -2.25
KRT9P35527 MIR548AO-201ENST00000579992 96 ntBASIC1.02□□□□□ -2.25
KRT9P35527 MIR548AE2-201ENST00000583456 67 ntBASIC1.02□□□□□ -2.25
KRT9P35527 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.02□□□□□ -2.25
KRT9P35527 FAM71BP1-201ENST00000604431 523 ntBASIC1.02□□□□□ -2.25
KRT9P35527 SNORD38B-202ENST00000625943 69 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 251.3 ms