Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RNU6-1307P-201ENST00000391012 103 ntBASIC1.65□□□□□ -2.15
HOXC12P31275 AP1B1P2-201ENST00000416196 106 ntBASIC1.65□□□□□ -2.15
HOXC12P31275 TRMT112P2-201ENST00000512910 132 ntBASIC1.65□□□□□ -2.15
HOXC12P31275 Y_RNA.677-201ENST00000516401 85 ntBASIC1.65□□□□□ -2.15
HOXC12P31275 SNORA25.15-201ENST00000516487 89 ntBASIC1.65□□□□□ -2.15
HOXC12P31275 SNORA4-201ENST00000584302 138 ntBASIC1.65□□□□□ -2.15
HOXC12P31275 MIR30D-201ENST00000362283 70 ntBASIC1.64□□□□□ -2.15
HOXC12P31275 RNU6-580P-201ENST00000365159 107 ntBASIC1.64□□□□□ -2.15
HOXC12P31275 Y_RNA.544-201ENST00000384650 113 ntBASIC1.64□□□□□ -2.15
HOXC12P31275 SNORD13-201ENST00000459299 104 ntBASIC1.64□□□□□ -2.15
HOXC12P31275 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.64□□□□□ -2.15
HOXC12P31275 uc_338.6-201ENST00000613544 171 ntBASIC1.64□□□□□ -2.15
HOXC12P31275 Y_RNA.10-201ENST00000362371 110 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 SNORA25.9-201ENST00000365087 128 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 Y_RNA.363-201ENST00000365529 113 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 MIR518E-201ENST00000385252 88 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 RNU6-910P-201ENST00000390844 107 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 SNORA75.2-201ENST00000391138 150 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 SNORA75.3-201ENST00000391231 150 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 RNU6-447P-201ENST00000410293 104 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 RNU6-1118P-201ENST00000410382 104 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 RNU6-1076P-201ENST00000410397 104 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 RNU6-355P-201ENST00000410427 104 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 RNU6-791P-201ENST00000410467 104 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 Y_RNA.601-201ENST00000410500 113 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 RNU6-705P-201ENST00000410601 104 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 RNU6-1100P-201ENST00000410691 104 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 RNU6-860P-201ENST00000410860 104 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 RNU6-1217P-201ENST00000411276 104 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 RNU6-785P-201ENST00000411324 104 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 RNU1-98P-201ENST00000458992 160 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 AC133485.1-201ENST00000567176 124 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXC12P31275 MIR4255-201ENST00000579351 72 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 U6.90-201ENST00000614007 104 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 AP001318.4-201ENST00000616637 121 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 U6.70-201ENST00000620287 104 ntBASIC1.63□□□□□ -2.15
HOXC12P31275 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
HOXC12P31275 RNU6-1313P-201ENST00000362622 102 ntBASIC1.62□□□□□ -2.15
HOXC12P31275 Y_RNA.98-201ENST00000363109 102 ntBASIC1.62□□□□□ -2.15
HOXC12P31275 Y_RNA.168-201ENST00000363740 102 ntBASIC1.62□□□□□ -2.15
HOXC12P31275 RNU6-1201P-201ENST00000384227 107 ntBASIC1.62□□□□□ -2.15
HOXC12P31275 MRPL35P3-201ENST00000421557 364 ntBASIC1.62□□□□□ -2.15
HOXC12P31275 AL591704.2-201ENST00000421658 181 ntBASIC1.62□□□□□ -2.15
HOXC12P31275 RNU7-48P-201ENST00000458875 63 ntBASIC1.62□□□□□ -2.15
HOXC12P31275 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.62□□□□□ -2.15
HOXC12P31275 UBL5P1-201ENST00000507979 193 ntBASIC1.62□□□□□ -2.15
HOXC12P31275 AL442128.1-201ENST00000615151 90 ntBASIC1.62□□□□□ -2.15
HOXC12P31275 SNORA16.1-201ENST00000364597 132 ntBASIC1.61□□□□□ -2.15
HOXC12P31275 SNORD113.3-201ENST00000364630 78 ntBASIC1.61□□□□□ -2.15
HOXC12P31275 MIR34C-201ENST00000384831 77 ntBASIC1.61□□□□□ -2.15
HOXC12P31275 MT-TF-201ENST00000387314 71 ntBASIC1.61□□□□□ -2.15
HOXC12P31275 SNORA67.5-201ENST00000391036 107 ntBASIC1.61□□□□□ -2.15
HOXC12P31275 RNU4-62P-201ENST00000410125 130 ntBASIC1.61□□□□□ -2.15
HOXC12P31275 RPS29P28-201ENST00000446439 141 ntBASIC1.61□□□□□ -2.15
HOXC12P31275 SCARNA23-201ENST00000516060 130 ntBASIC1.61□□□□□ -2.15
HOXC12P31275 SNORA40.13-201ENST00000516379 120 ntBASIC1.61□□□□□ -2.15
HOXC12P31275 Y_RNA.818-201ENST00000618813 71 ntBASIC1.61□□□□□ -2.15
HOXC12P31275 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
HOXC12P31275 SNORA80D-201ENST00000384488 135 ntBASIC1.6□□□□□ -2.15
HOXC12P31275 MIR489-201ENST00000384923 84 ntBASIC1.6□□□□□ -2.15
HOXC12P31275 U8.15-201ENST00000390947 134 ntBASIC1.6□□□□□ -2.15
HOXC12P31275 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.6□□□□□ -2.15
HOXC12P31275 MIR18B-201ENST00000454574 71 ntBASIC1.6□□□□□ -2.15
HOXC12P31275 AC036111.3-201ENST00000526389 112 ntBASIC1.6□□□□□ -2.15
HOXC12P31275 AC096720.1-201ENST00000604441 183 ntBASIC1.6□□□□□ -2.15
HOXC12P31275 MIR376B-201ENST00000614515 100 ntBASIC1.6□□□□□ -2.15
HOXC12P31275 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.6□□□□□ -2.15
HOXC12P31275 Y_RNA.348-201ENST00000365403 103 ntBASIC1.59□□□□□ -2.15
HOXC12P31275 Y_RNA.377-201ENST00000365644 108 ntBASIC1.59□□□□□ -2.15
HOXC12P31275 Y_RNA.466-201ENST00000384294 113 ntBASIC1.59□□□□□ -2.15
HOXC12P31275 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.59□□□□□ -2.15
HOXC12P31275 RPS29P23-201ENST00000458635 123 ntBASIC1.59□□□□□ -2.15
HOXC12P31275 Y_RNA.659-201ENST00000515994 113 ntBASIC1.59□□□□□ -2.15
HOXC12P31275 AC023827.1-201ENST00000569247 97 ntBASIC1.59□□□□□ -2.15
HOXC12P31275 AC012676.2-201ENST00000619258 186 ntBASIC1.59□□□□□ -2.15
HOXC12P31275 AC084768.2-201ENST00000622736 221 ntBASIC1.59□□□□□ -2.15
HOXC12P31275 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.16
HOXC12P31275 AC003989.2-201ENST00000440224 169 ntBASIC1.58□□□□□ -2.16
HOXC12P31275 snoU13.21-201ENST00000459368 105 ntBASIC1.58□□□□□ -2.16
HOXC12P31275 RNU7-21P-201ENST00000459430 62 ntBASIC1.58□□□□□ -2.16
HOXC12P31275 SNORA70.22-201ENST00000517160 124 ntBASIC1.58□□□□□ -2.16
HOXC12P31275 MIR502-201ENST00000606349 86 ntBASIC1.58□□□□□ -2.16
HOXC12P31275 Y_RNA.247-201ENST00000364500 92 ntBASIC1.57□□□□□ -2.16
HOXC12P31275 SUMO2P12-201ENST00000405924 140 ntBASIC1.57□□□□□ -2.16
HOXC12P31275 SNORD93-201ENST00000408813 74 ntBASIC1.57□□□□□ -2.16
HOXC12P31275 SNORD79.1-201ENST00000516069 84 ntBASIC1.57□□□□□ -2.16
HOXC12P31275 RNU6-795P-201ENST00000516323 103 ntBASIC1.57□□□□□ -2.16
HOXC12P31275 Y_RNA.93-201ENST00000363066 109 ntBASIC1.56□□□□□ -2.16
HOXC12P31275 Y_RNA.107-201ENST00000363190 121 ntBASIC1.56□□□□□ -2.16
HOXC12P31275 SNORD38.1-201ENST00000363863 68 ntBASIC1.56□□□□□ -2.16
HOXC12P31275 SNORD45B-201ENST00000364617 72 ntBASIC1.56□□□□□ -2.16
HOXC12P31275 RNU6-934P-201ENST00000365154 107 ntBASIC1.56□□□□□ -2.16
HOXC12P31275 RNU6-905P-201ENST00000384434 107 ntBASIC1.56□□□□□ -2.16
HOXC12P31275 MIR9-3-201ENST00000385084 90 ntBASIC1.56□□□□□ -2.16
HOXC12P31275 SNORD111-201ENST00000408139 94 ntBASIC1.56□□□□□ -2.16
HOXC12P31275 RNY4P30-201ENST00000410216 95 ntBASIC1.56□□□□□ -2.16
HOXC12P31275 SNORD83.1-201ENST00000411362 77 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 206.8 ms