Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AC013791.1-201ENST00000616619 62 ntBASIC-1.75□□□□□ -2.69
PTPRMP28827 RNU6-170P-201ENST00000362832 104 ntBASIC-1.75□□□□□ -2.69
PTPRMP28827 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.75□□□□□ -2.69
PTPRMP28827 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.75□□□□□ -2.69
PTPRMP28827 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.75□□□□□ -2.69
PTPRMP28827 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.75□□□□□ -2.69
PTPRMP28827 AL606845.1-201ENST00000404881 255 ntBASIC-1.75□□□□□ -2.69
PTPRMP28827 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-1.75□□□□□ -2.69
PTPRMP28827 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.76□□□□□ -2.69
PTPRMP28827 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.76□□□□□ -2.69
PTPRMP28827 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.76□□□□□ -2.69
PTPRMP28827 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.76□□□□□ -2.69
PTPRMP28827 MIR216B-201ENST00000390186 82 ntBASIC-1.76□□□□□ -2.69
PTPRMP28827 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.76□□□□□ -2.69
PTPRMP28827 AC022028.1-201ENST00000412054 408 ntBASIC-1.76□□□□□ -2.69
PTPRMP28827 RNU6-911P-201ENST00000516523 104 ntBASIC-1.76□□□□□ -2.69
PTPRMP28827 AC009094.1-201ENST00000564443 426 ntBASIC-1.76□□□□□ -2.69
PTPRMP28827 MIR5692C2-201ENST00000577959 77 ntBASIC-1.76□□□□□ -2.69
PTPRMP28827 PART1_1.1-201ENST00000611761 217 ntBASIC-1.76□□□□□ -2.69
PTPRMP28827 AC073114.1-201ENST00000612027 490 ntBASIC-1.76□□□□□ -2.69
PTPRMP28827 MIR6863-201ENST00000636112 90 ntBASIC-1.76□□□□□ -2.69
PTPRMP28827 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.77□□□□□ -2.69
PTPRMP28827 SNORA51.5-201ENST00000384126 131 ntBASIC-1.77□□□□□ -2.69
PTPRMP28827 MIR548H1-201ENST00000408610 102 ntBASIC-1.77□□□□□ -2.69
PTPRMP28827 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.77□□□□□ -2.69
PTPRMP28827 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.77□□□□□ -2.69
PTPRMP28827 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.77□□□□□ -2.69
PTPRMP28827 MIR4790-201ENST00000577799 79 ntBASIC-1.77□□□□□ -2.69
PTPRMP28827 AL359881.1-201ENST00000602916 267 ntBASIC-1.77□□□□□ -2.69
PTPRMP28827 PISRT1.1-201ENST00000616930 107 ntBASIC-1.77□□□□□ -2.69
PTPRMP28827 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.78□□□□□ -2.69
PTPRMP28827 RNU6-905P-201ENST00000384434 107 ntBASIC-1.78□□□□□ -2.69
PTPRMP28827 RNU7-106P-201ENST00000459514 67 ntBASIC-1.78□□□□□ -2.69
PTPRMP28827 RPS29P25-201ENST00000481709 171 ntBASIC-1.78□□□□□ -2.69
PTPRMP28827 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.78□□□□□ -2.69
PTPRMP28827 RNU7-4P-201ENST00000516961 62 ntBASIC-1.78□□□□□ -2.69
PTPRMP28827 RNU6-264P-201ENST00000517134 104 ntBASIC-1.78□□□□□ -2.69
PTPRMP28827 MIR376A2-201ENST00000636782 80 ntBASIC-1.78□□□□□ -2.69
PTPRMP28827 SNORD114-4-201ENST00000363962 75 ntBASIC-1.79□□□□□ -2.7
PTPRMP28827 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.79□□□□□ -2.7
PTPRMP28827 SNORA32-201ENST00000384072 121 ntBASIC-1.79□□□□□ -2.7
PTPRMP28827 RNU6-763P-201ENST00000390865 106 ntBASIC-1.79□□□□□ -2.7
PTPRMP28827 MIR548K-201ENST00000408406 116 ntBASIC-1.79□□□□□ -2.7
PTPRMP28827 RNU6-588P-201ENST00000410281 105 ntBASIC-1.79□□□□□ -2.7
PTPRMP28827 RNU6-373P-201ENST00000411247 98 ntBASIC-1.79□□□□□ -2.7
PTPRMP28827 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.79□□□□□ -2.7
PTPRMP28827 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.79□□□□□ -2.7
PTPRMP28827 AC006504.6-201ENST00000590142 199 ntBASIC-1.79□□□□□ -2.7
PTPRMP28827 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.79□□□□□ -2.7
PTPRMP28827 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.8□□□□□ -2.7
PTPRMP28827 RNU6-21P-201ENST00000384710 107 ntBASIC-1.8□□□□□ -2.7
PTPRMP28827 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.8□□□□□ -2.7
PTPRMP28827 RNU7-48P-201ENST00000458875 63 ntBASIC-1.8□□□□□ -2.7
PTPRMP28827 MIR3129-201ENST00000581095 76 ntBASIC-1.8□□□□□ -2.7
PTPRMP28827 AL353803.5-201ENST00000599815 141 ntBASIC-1.8□□□□□ -2.7
PTPRMP28827 AC124864.2-201ENST00000624736 186 ntBASIC-1.8□□□□□ -2.7
PTPRMP28827 U6.92-201ENST00000636464 89 ntBASIC-1.8□□□□□ -2.7
PTPRMP28827 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.81□□□□□ -2.7
PTPRMP28827 RNU6-576P-201ENST00000390854 102 ntBASIC-1.81□□□□□ -2.7
PTPRMP28827 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.81□□□□□ -2.7
PTPRMP28827 RNU6-908P-201ENST00000410160 94 ntBASIC-1.81□□□□□ -2.7
PTPRMP28827 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.81□□□□□ -2.7
PTPRMP28827 RNU6-412P-201ENST00000516434 106 ntBASIC-1.81□□□□□ -2.7
PTPRMP28827 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.81□□□□□ -2.7
PTPRMP28827 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 SNORA62.4-201ENST00000365504 151 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 RNU6-483P-201ENST00000384088 108 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.82□□□□□ -2.7
PTPRMP28827 RNU7-169P-201ENST00000459456 61 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 MTND5P5-201ENST00000503764 376 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 AL669831.3-213ENST00000636676 183 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 RNU6-571P-201ENST00000384128 107 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 SNORD63-201ENST00000384262 68 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 MIR496-201ENST00000385226 102 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 MIR526A2-201ENST00000390198 65 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.82□□□□□ -2.7
PTPRMP28827 RNU6-191P-201ENST00000516295 94 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 Y_RNA.682-201ENST00000516457 100 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 AC097639.2-201ENST00000603159 172 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 AL603755.1-201ENST00000619504 163 ntBASIC-1.82□□□□□ -2.7
PTPRMP28827 RNU6-704P-201ENST00000364162 103 ntBASIC-1.83□□□□□ -2.7
PTPRMP28827 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.83□□□□□ -2.7
PTPRMP28827 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.83□□□□□ -2.7
PTPRMP28827 SNORA75-201ENST00000384158 137 ntBASIC-1.83□□□□□ -2.7
PTPRMP28827 MIR29B1-201ENST00000385015 81 ntBASIC-1.83□□□□□ -2.7
PTPRMP28827 MIR124-2-201ENST00000385081 109 ntBASIC-1.83□□□□□ -2.7
PTPRMP28827 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.83□□□□□ -2.7
PTPRMP28827 RNA5SP144-201ENST00000410846 116 ntBASIC-1.83□□□□□ -2.7
PTPRMP28827 SNRPGP8-201ENST00000454064 226 ntBASIC-1.83□□□□□ -2.7
PTPRMP28827 SEPT14P8-201ENST00000508026 178 ntBASIC-1.83□□□□□ -2.7
PTPRMP28827 RNU6-764P-201ENST00000516396 105 ntBASIC-1.83□□□□□ -2.7
PTPRMP28827 RNU6-570P-201ENST00000517051 105 ntBASIC-1.83□□□□□ -2.7
PTPRMP28827 SNORA2.1-201ENST00000363089 137 ntBASIC-1.84□□□□□ -2.7
PTPRMP28827 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.84□□□□□ -2.7
PTPRMP28827 RNY3P3-201ENST00000363816 102 ntBASIC-1.84□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms