Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SNORD93-201ENST00000408813 74 ntBASIC1.36□□□□□ -2.19
CD40P25942 RNU4-62P-201ENST00000410125 130 ntBASIC1.36□□□□□ -2.19
CD40P25942 RNU6-733P-201ENST00000410759 104 ntBASIC1.36□□□□□ -2.19
CD40P25942 AC133485.1-201ENST00000567176 124 ntBASIC1.36□□□□□ -2.19
CD40P25942 BX248123.2-201ENST00000606318 124 ntBASIC1.36□□□□□ -2.19
CD40P25942 uc_338.28-201ENST00000612082 187 ntBASIC1.36□□□□□ -2.19
CD40P25942 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CD40P25942 Y_RNA.116-201ENST00000363292 103 ntBASIC1.35□□□□□ -2.19
CD40P25942 RNU6-997P-201ENST00000384725 107 ntBASIC1.35□□□□□ -2.19
CD40P25942 MIR517C-201ENST00000385103 95 ntBASIC1.35□□□□□ -2.19
CD40P25942 SNORA67.6-201ENST00000391093 99 ntBASIC1.35□□□□□ -2.19
CD40P25942 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.35□□□□□ -2.19
CD40P25942 Y_RNA.81-201ENST00000362997 102 ntBASIC1.34□□□□□ -2.19
CD40P25942 RNU1-42P-201ENST00000364033 160 ntBASIC1.34□□□□□ -2.19
CD40P25942 RNU6-60P-201ENST00000364792 103 ntBASIC1.34□□□□□ -2.19
CD40P25942 MIR605-201ENST00000385078 83 ntBASIC1.34□□□□□ -2.19
CD40P25942 RNU6-679P-201ENST00000391003 106 ntBASIC1.34□□□□□ -2.19
CD40P25942 MIR1257-201ENST00000408490 117 ntBASIC1.34□□□□□ -2.19
CD40P25942 BTF3P4-201ENST00000418852 495 ntBASIC1.34□□□□□ -2.19
CD40P25942 RNU7-185P-201ENST00000459215 60 ntBASIC1.34□□□□□ -2.19
CD40P25942 AL645939.4-201ENST00000604495 135 ntBASIC1.34□□□□□ -2.19
CD40P25942 AL512598.1-201ENST00000610158 273 ntBASIC1.34□□□□□ -2.19
CD40P25942 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.34□□□□□ -2.19
CD40P25942 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
CD40P25942 Y_RNA.163-201ENST00000363702 113 ntBASIC1.33□□□□□ -2.2
CD40P25942 RNU6-865P-201ENST00000364772 107 ntBASIC1.33□□□□□ -2.2
CD40P25942 SNORA25.8-201ENST00000364831 128 ntBASIC1.33□□□□□ -2.2
CD40P25942 Y_RNA.338-201ENST00000365320 114 ntBASIC1.33□□□□□ -2.2
CD40P25942 RNU6-447P-201ENST00000410293 104 ntBASIC1.33□□□□□ -2.2
CD40P25942 RNU6-1118P-201ENST00000410382 104 ntBASIC1.33□□□□□ -2.2
CD40P25942 RNU6-1076P-201ENST00000410397 104 ntBASIC1.33□□□□□ -2.2
CD40P25942 RNU6-355P-201ENST00000410427 104 ntBASIC1.33□□□□□ -2.2
CD40P25942 RNU6-791P-201ENST00000410467 104 ntBASIC1.33□□□□□ -2.2
CD40P25942 RNU6-705P-201ENST00000410601 104 ntBASIC1.33□□□□□ -2.2
CD40P25942 RNU6-1100P-201ENST00000410691 104 ntBASIC1.33□□□□□ -2.2
CD40P25942 RNU6-860P-201ENST00000410860 104 ntBASIC1.33□□□□□ -2.2
CD40P25942 RNU6-1217P-201ENST00000411276 104 ntBASIC1.33□□□□□ -2.2
CD40P25942 RNU6-785P-201ENST00000411324 104 ntBASIC1.33□□□□□ -2.2
CD40P25942 AC096949.1-201ENST00000412047 152 ntBASIC1.33□□□□□ -2.2
CD40P25942 AL353813.1-201ENST00000440700 253 ntBASIC1.33□□□□□ -2.2
CD40P25942 RPS29P28-201ENST00000446439 141 ntBASIC1.33□□□□□ -2.2
CD40P25942 RNU7-48P-201ENST00000458875 63 ntBASIC1.33□□□□□ -2.2
CD40P25942 U6.90-201ENST00000614007 104 ntBASIC1.33□□□□□ -2.2
CD40P25942 U6.70-201ENST00000620287 104 ntBASIC1.33□□□□□ -2.2
CD40P25942 AL512310.12-203ENST00000640543 90 ntBASIC1.33□□□□□ -2.2
CD40P25942 RNU1-36P-201ENST00000365130 165 ntBASIC1.32□□□□□ -2.2
CD40P25942 Y_RNA.360-201ENST00000365512 102 ntBASIC1.32□□□□□ -2.2
CD40P25942 RNU6-106P-201ENST00000384405 107 ntBASIC1.32□□□□□ -2.2
CD40P25942 RNU6-554P-201ENST00000410466 106 ntBASIC1.32□□□□□ -2.2
CD40P25942 AP1B1P2-201ENST00000416196 106 ntBASIC1.32□□□□□ -2.2
CD40P25942 RPS26P5-201ENST00000418544 335 ntBASIC1.32□□□□□ -2.2
CD40P25942 PDCD5P2-201ENST00000507570 312 ntBASIC1.32□□□□□ -2.2
CD40P25942 SNORA31.24-201ENST00000517232 57 ntBASIC1.32□□□□□ -2.2
CD40P25942 MIR4498-201ENST00000577599 66 ntBASIC1.32□□□□□ -2.2
CD40P25942 AC020891.4-201ENST00000605745 93 ntBASIC1.32□□□□□ -2.2
CD40P25942 snoU13.31-201ENST00000607291 104 ntBASIC1.32□□□□□ -2.2
CD40P25942 U6.109-201ENST00000636749 87 ntBASIC1.32□□□□□ -2.2
CD40P25942 RNU6-755P-201ENST00000364400 103 ntBASIC1.31□□□□□ -2.2
CD40P25942 Y_RNA.328-201ENST00000365208 113 ntBASIC1.31□□□□□ -2.2
CD40P25942 MIR1323-201ENST00000408090 73 ntBASIC1.31□□□□□ -2.2
CD40P25942 MIR1302-5-201ENST00000408164 150 ntBASIC1.31□□□□□ -2.2
CD40P25942 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
CD40P25942 AC067940.1-201ENST00000458411 300 ntBASIC1.31□□□□□ -2.2
CD40P25942 AC108729.3-201ENST00000513484 108 ntBASIC1.31□□□□□ -2.2
CD40P25942 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.31□□□□□ -2.2
CD40P25942 MIR376B-201ENST00000614515 100 ntBASIC1.31□□□□□ -2.2
CD40P25942 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
CD40P25942 Y_RNA.98-201ENST00000363109 102 ntBASIC1.3□□□□□ -2.2
CD40P25942 RNU6-403P-201ENST00000363163 104 ntBASIC1.3□□□□□ -2.2
CD40P25942 RNA5SP133-201ENST00000363368 119 ntBASIC1.3□□□□□ -2.2
CD40P25942 MIR19B1-201ENST00000384829 87 ntBASIC1.3□□□□□ -2.2
CD40P25942 MIR34C-201ENST00000384831 77 ntBASIC1.3□□□□□ -2.2
CD40P25942 MIR100-201ENST00000385259 80 ntBASIC1.3□□□□□ -2.2
CD40P25942 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.3□□□□□ -2.2
CD40P25942 RNU4-83P-201ENST00000410863 133 ntBASIC1.3□□□□□ -2.2
CD40P25942 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.3□□□□□ -2.2
CD40P25942 RNU7-95P-201ENST00000459222 64 ntBASIC1.3□□□□□ -2.2
CD40P25942 RNA5SP404-201ENST00000517118 132 ntBASIC1.3□□□□□ -2.2
CD40P25942 AC138749.4-201ENST00000563970 127 ntBASIC1.3□□□□□ -2.2
CD40P25942 MIR4491-201ENST00000581087 68 ntBASIC1.3□□□□□ -2.2
CD40P25942 MIR4676-201ENST00000583078 72 ntBASIC1.3□□□□□ -2.2
CD40P25942 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.3□□□□□ -2.2
CD40P25942 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
CD40P25942 SNORA72.6-201ENST00000384520 129 ntBASIC1.29□□□□□ -2.2
CD40P25942 MIR577-201ENST00000385196 96 ntBASIC1.29□□□□□ -2.2
CD40P25942 Y_RNA.588-201ENST00000391254 102 ntBASIC1.29□□□□□ -2.2
CD40P25942 MIR1304-201ENST00000408243 91 ntBASIC1.29□□□□□ -2.2
CD40P25942 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.29□□□□□ -2.2
CD40P25942 SNORD124-201ENST00000459577 104 ntBASIC1.29□□□□□ -2.2
CD40P25942 RNU6-1018P-201ENST00000516577 106 ntBASIC1.29□□□□□ -2.2
CD40P25942 AC141557.1-201ENST00000540982 400 ntBASIC1.29□□□□□ -2.2
CD40P25942 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CD40P25942 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.29□□□□□ -2.2
CD40P25942 MIR1-1-201ENST00000362147 71 ntBASIC1.28□□□□□ -2.2
CD40P25942 RNU6-1313P-201ENST00000362622 102 ntBASIC1.28□□□□□ -2.2
CD40P25942 RNY1P2-201ENST00000364820 117 ntBASIC1.28□□□□□ -2.2
CD40P25942 RNA5SP363-201ENST00000365072 115 ntBASIC1.28□□□□□ -2.2
CD40P25942 MIR125B2-201ENST00000385128 89 ntBASIC1.28□□□□□ -2.2
CD40P25942 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CD40P25942 AL354695.1-201ENST00000427935 228 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms