Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RNU6-795P-201ENST00000516323 103 ntBASIC2.23□□□□□ -2.05
RFX1P22670 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.23□□□□□ -2.05
RFX1P22670 Y_RNA.98-201ENST00000363109 102 ntBASIC2.22□□□□□ -2.05
RFX1P22670 RNU6-865P-201ENST00000364772 107 ntBASIC2.22□□□□□ -2.05
RFX1P22670 AC004941.2-201ENST00000427009 228 ntBASIC2.22□□□□□ -2.05
RFX1P22670 RNU6-1006P-201ENST00000516998 103 ntBASIC2.22□□□□□ -2.05
RFX1P22670 MIR4781-201ENST00000585250 76 ntBASIC2.22□□□□□ -2.05
RFX1P22670 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
RFX1P22670 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RFX1P22670 ZNF355P-201ENST00000427301 3216 ntBASIC2.21□□□□□ -2.06
RFX1P22670 Y_RNA.342-201ENST00000365352 113 ntBASIC2.21□□□□□ -2.06
RFX1P22670 MIR34C-201ENST00000384831 77 ntBASIC2.21□□□□□ -2.06
RFX1P22670 AL445685.2-201ENST00000422551 342 ntBASIC2.21□□□□□ -2.06
RFX1P22670 RNU7-62P-201ENST00000458856 62 ntBASIC2.21□□□□□ -2.06
RFX1P22670 RNU7-48P-201ENST00000458875 63 ntBASIC2.21□□□□□ -2.06
RFX1P22670 Y_RNA.659-201ENST00000515994 113 ntBASIC2.21□□□□□ -2.06
RFX1P22670 RN7SKP88-201ENST00000516847 250 ntBASIC2.21□□□□□ -2.06
RFX1P22670 MIR4498-201ENST00000577599 66 ntBASIC2.21□□□□□ -2.06
RFX1P22670 7SK.8-201ENST00000612110 250 ntBASIC2.21□□□□□ -2.06
RFX1P22670 MIR376B-201ENST00000614515 100 ntBASIC2.21□□□□□ -2.06
RFX1P22670 7SK.11-201ENST00000615477 250 ntBASIC2.21□□□□□ -2.06
RFX1P22670 7SK.13-201ENST00000622040 250 ntBASIC2.21□□□□□ -2.06
RFX1P22670 MIR30D-201ENST00000362283 70 ntBASIC2.2□□□□□ -2.06
RFX1P22670 RNU6-654P-201ENST00000364373 107 ntBASIC2.2□□□□□ -2.06
RFX1P22670 Y_RNA.247-201ENST00000364500 92 ntBASIC2.2□□□□□ -2.06
RFX1P22670 U8.13-201ENST00000390842 128 ntBASIC2.2□□□□□ -2.06
RFX1P22670 RNU6-1165P-201ENST00000410119 107 ntBASIC2.2□□□□□ -2.06
RFX1P22670 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.2□□□□□ -2.06
RFX1P22670 MIR4777-201ENST00000583710 86 ntBASIC2.2□□□□□ -2.06
RFX1P22670 MIR6845-201ENST00000613182 61 ntBASIC2.2□□□□□ -2.06
RFX1P22670 SEPT14P17-201ENST00000617978 177 ntBASIC2.2□□□□□ -2.06
RFX1P22670 AC091304.10-201ENST00000641554 121 ntBASIC2.2□□□□□ -2.06
RFX1P22670 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RFX1P22670 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RFX1P22670 Y_RNA.95-201ENST00000363079 95 ntBASIC2.19□□□□□ -2.06
RFX1P22670 SNORD38.1-201ENST00000363863 68 ntBASIC2.19□□□□□ -2.06
RFX1P22670 RNA5SP160-201ENST00000364866 120 ntBASIC2.19□□□□□ -2.06
RFX1P22670 MT-TF-201ENST00000387314 71 ntBASIC2.19□□□□□ -2.06
RFX1P22670 MIR548Z-201ENST00000584743 97 ntBASIC2.19□□□□□ -2.06
RFX1P22670 AP000553.5-201ENST00000641933 54 ntBASIC2.19□□□□□ -2.06
RFX1P22670 Y_RNA.168-201ENST00000363740 102 ntBASIC2.18□□□□□ -2.06
RFX1P22670 RNU6-60P-201ENST00000364792 103 ntBASIC2.18□□□□□ -2.06
RFX1P22670 RNA5SP173-201ENST00000364857 136 ntBASIC2.18□□□□□ -2.06
RFX1P22670 RPS29P28-201ENST00000446439 141 ntBASIC2.18□□□□□ -2.06
RFX1P22670 AC133485.1-201ENST00000567176 124 ntBASIC2.18□□□□□ -2.06
RFX1P22670 MIR4439-201ENST00000583746 80 ntBASIC2.18□□□□□ -2.06
RFX1P22670 SNORA4-201ENST00000584302 138 ntBASIC2.18□□□□□ -2.06
RFX1P22670 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.18□□□□□ -2.06
RFX1P22670 RNA5SP138-201ENST00000365098 114 ntBASIC2.17□□□□□ -2.06
RFX1P22670 RNU6-644P-201ENST00000391155 98 ntBASIC2.17□□□□□ -2.06
RFX1P22670 SNORA40.18-201ENST00000391200 128 ntBASIC2.17□□□□□ -2.06
RFX1P22670 AC048334.1-201ENST00000477975 159 ntBASIC2.17□□□□□ -2.06
RFX1P22670 AC079804.2-201ENST00000490376 200 ntBASIC2.17□□□□□ -2.06
RFX1P22670 RN7SKP12-201ENST00000516275 143 ntBASIC2.17□□□□□ -2.06
RFX1P22670 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
RFX1P22670 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.16□□□□□ -2.06
RFX1P22670 RNA5SP95-201ENST00000410319 137 ntBASIC2.16□□□□□ -2.06
RFX1P22670 RNA5SP338-201ENST00000410495 85 ntBASIC2.16□□□□□ -2.06
RFX1P22670 MIR18B-201ENST00000454574 71 ntBASIC2.16□□□□□ -2.06
RFX1P22670 RNU7-61P-201ENST00000515897 61 ntBASIC2.16□□□□□ -2.06
RFX1P22670 AC026421.1-201ENST00000519101 163 ntBASIC2.16□□□□□ -2.06
RFX1P22670 AP001362.1-201ENST00000625165 124 ntBASIC2.16□□□□□ -2.06
RFX1P22670 MIR378A-201ENST00000362177 66 ntBASIC2.15□□□□□ -2.07
RFX1P22670 MIR450A2-201ENST00000385022 100 ntBASIC2.15□□□□□ -2.07
RFX1P22670 U8.15-201ENST00000390947 134 ntBASIC2.15□□□□□ -2.07
RFX1P22670 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.15□□□□□ -2.07
RFX1P22670 AC108667.1-201ENST00000428618 249 ntBASIC2.15□□□□□ -2.07
RFX1P22670 AC109327.2-201ENST00000448339 378 ntBASIC2.15□□□□□ -2.07
RFX1P22670 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.15□□□□□ -2.07
RFX1P22670 uc_338.6-201ENST00000613544 171 ntBASIC2.15□□□□□ -2.07
RFX1P22670 Y_RNA.96-201ENST00000363092 109 ntBASIC2.14□□□□□ -2.07
RFX1P22670 RNY1P2-201ENST00000364820 117 ntBASIC2.14□□□□□ -2.07
RFX1P22670 Y_RNA.290-201ENST00000364879 114 ntBASIC2.14□□□□□ -2.07
RFX1P22670 RNU6-1134P-201ENST00000365156 101 ntBASIC2.14□□□□□ -2.07
RFX1P22670 RNU6-573P-201ENST00000383938 106 ntBASIC2.14□□□□□ -2.07
RFX1P22670 RNU6-592P-201ENST00000411333 103 ntBASIC2.14□□□□□ -2.07
RFX1P22670 snoU13.31-201ENST00000607291 104 ntBASIC2.14□□□□□ -2.07
RFX1P22670 MIR1245B-201ENST00000636115 69 ntBASIC2.14□□□□□ -2.07
RFX1P22670 MIR494-201ENST00000349529 81 ntBASIC2.13□□□□□ -2.07
RFX1P22670 RNU6-820P-201ENST00000384273 107 ntBASIC2.13□□□□□ -2.07
RFX1P22670 MRPL35P3-201ENST00000421557 364 ntBASIC2.13□□□□□ -2.07
RFX1P22670 SNORA31.2-201ENST00000516019 134 ntBASIC2.13□□□□□ -2.07
RFX1P22670 AP003327.1-201ENST00000529684 127 ntBASIC2.13□□□□□ -2.07
RFX1P22670 Y_RNA.783-201ENST00000613546 102 ntBASIC2.13□□□□□ -2.07
RFX1P22670 AL161722.3-201ENST00000605789 2983 ntBASIC2.13□□□□□ -2.07
RFX1P22670 RNY1P10-201ENST00000363268 113 ntBASIC2.12□□□□□ -2.07
RFX1P22670 RNU6-1163P-201ENST00000364516 107 ntBASIC2.12□□□□□ -2.07
RFX1P22670 Y_RNA.467-201ENST00000384297 102 ntBASIC2.12□□□□□ -2.07
RFX1P22670 SNORD38.2-201ENST00000384470 69 ntBASIC2.12□□□□□ -2.07
RFX1P22670 RNU6-90P-201ENST00000606352 106 ntBASIC2.12□□□□□ -2.07
RFX1P22670 MIR548G-201ENST00000408442 89 ntBASIC2.11□□□□□ -2.07
RFX1P22670 RNU2-40P-201ENST00000410833 196 ntBASIC2.11□□□□□ -2.07
RFX1P22670 Y_RNA.705-201ENST00000516862 110 ntBASIC2.11□□□□□ -2.07
RFX1P22670 MIR5089-201ENST00000580047 84 ntBASIC2.11□□□□□ -2.07
RFX1P22670 AC012676.2-201ENST00000619258 186 ntBASIC2.11□□□□□ -2.07
RFX1P22670 SNORD113.3-201ENST00000364630 78 ntBASIC2.1□□□□□ -2.07
RFX1P22670 RNU6-1152P-201ENST00000384576 107 ntBASIC2.1□□□□□ -2.07
RFX1P22670 RNU6-1275P-201ENST00000391087 107 ntBASIC2.1□□□□□ -2.07
RFX1P22670 RNU6-972P-201ENST00000391208 107 ntBASIC2.1□□□□□ -2.07
RFX1P22670 Y_RNA.593-201ENST00000410292 98 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms