Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.43□□□□□ -2.48
USF1P22415 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.43□□□□□ -2.48
USF1P22415 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.43□□□□□ -2.48
USF1P22415 MIR3666-201ENST00000607845 111 ntBASIC-0.43□□□□□ -2.48
USF1P22415 MIR148A-201ENST00000362215 68 ntBASIC-0.44□□□□□ -2.48
USF1P22415 SNORD41.1-201ENST00000391000 69 ntBASIC-0.44□□□□□ -2.48
USF1P22415 SNORA75.1-201ENST00000391130 148 ntBASIC-0.44□□□□□ -2.48
USF1P22415 MIR876-201ENST00000401147 81 ntBASIC-0.44□□□□□ -2.48
USF1P22415 RNU4-43P-201ENST00000410628 137 ntBASIC-0.44□□□□□ -2.48
USF1P22415 AC113618.1-201ENST00000416747 285 ntBASIC-0.44□□□□□ -2.48
USF1P22415 AC109327.2-201ENST00000448339 378 ntBASIC-0.44□□□□□ -2.48
USF1P22415 SNORD2.1-201ENST00000458762 69 ntBASIC-0.44□□□□□ -2.48
USF1P22415 RNU6-561P-201ENST00000516222 102 ntBASIC-0.44□□□□□ -2.48
USF1P22415 SCARNA15-202ENST00000516881 127 ntBASIC-0.44□□□□□ -2.48
USF1P22415 RNU6-988P-201ENST00000519081 107 ntBASIC-0.44□□□□□ -2.48
USF1P22415 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.45□□□□□ -2.48
USF1P22415 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.45□□□□□ -2.48
USF1P22415 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.45□□□□□ -2.48
USF1P22415 RNA5SP403-201ENST00000363598 108 ntBASIC-0.45□□□□□ -2.48
USF1P22415 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.45□□□□□ -2.48
USF1P22415 SNORD95.1-201ENST00000364099 68 ntBASIC-0.45□□□□□ -2.48
USF1P22415 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.45□□□□□ -2.48
USF1P22415 MT-TD-201ENST00000387419 68 ntBASIC-0.45□□□□□ -2.48
USF1P22415 RNU7-104P-201ENST00000459398 79 ntBASIC-0.45□□□□□ -2.48
USF1P22415 SNORD126-201ENST00000459475 77 ntBASIC-0.45□□□□□ -2.48
USF1P22415 SNORD116-25-201ENST00000516517 92 ntBASIC-0.45□□□□□ -2.48
USF1P22415 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.45□□□□□ -2.48
USF1P22415 MIR548H5-201ENST00000580314 60 ntBASIC-0.45□□□□□ -2.48
USF1P22415 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.46□□□□□ -2.48
USF1P22415 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.46□□□□□ -2.48
USF1P22415 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.46□□□□□ -2.48
USF1P22415 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.46□□□□□ -2.48
USF1P22415 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.46□□□□□ -2.48
USF1P22415 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.46□□□□□ -2.48
USF1P22415 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.46□□□□□ -2.48
USF1P22415 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.46□□□□□ -2.48
USF1P22415 SNORD49B-201ENST00000365172 72 ntBASIC-0.46□□□□□ -2.48
USF1P22415 SNORD14C-201ENST00000365382 88 ntBASIC-0.46□□□□□ -2.48
USF1P22415 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.46□□□□□ -2.48
USF1P22415 RNU6-30P-201ENST00000384561 107 ntBASIC-0.46□□□□□ -2.48
USF1P22415 RNU6-381P-201ENST00000391259 108 ntBASIC-0.46□□□□□ -2.48
USF1P22415 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.46□□□□□ -2.48
USF1P22415 AC082651.2-201ENST00000496833 166 ntBASIC-0.46□□□□□ -2.48
USF1P22415 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.46□□□□□ -2.48
USF1P22415 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.46□□□□□ -2.48
USF1P22415 AC098479.1-201ENST00000609225 154 ntBASIC-0.46□□□□□ -2.48
USF1P22415 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.46□□□□□ -2.48
USF1P22415 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.47□□□□□ -2.48
USF1P22415 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.47□□□□□ -2.48
USF1P22415 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.47□□□□□ -2.48
USF1P22415 MIR224-201ENST00000384889 81 ntBASIC-0.47□□□□□ -2.48
USF1P22415 RNU7-113P-201ENST00000459273 62 ntBASIC-0.47□□□□□ -2.48
USF1P22415 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.47□□□□□ -2.48
USF1P22415 RNU7-10P-201ENST00000607194 63 ntBASIC-0.47□□□□□ -2.48
USF1P22415 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.47□□□□□ -2.48
USF1P22415 MIR655-201ENST00000362159 97 ntBASIC-0.48□□□□□ -2.49
USF1P22415 RNY1P6-201ENST00000384193 109 ntBASIC-0.48□□□□□ -2.49
USF1P22415 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.48□□□□□ -2.49
USF1P22415 MIR624-201ENST00000385217 97 ntBASIC-0.48□□□□□ -2.49
USF1P22415 RNA5SP144-201ENST00000410846 116 ntBASIC-0.48□□□□□ -2.49
USF1P22415 RPS29P8-201ENST00000445109 171 ntBASIC-0.48□□□□□ -2.49
USF1P22415 RNA5SP33-201ENST00000516687 98 ntBASIC-0.48□□□□□ -2.49
USF1P22415 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.48□□□□□ -2.49
USF1P22415 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.48□□□□□ -2.49
USF1P22415 MIR548AZ-201ENST00000616567 95 ntBASIC-0.48□□□□□ -2.49
USF1P22415 AL365265.1-201ENST00000621045 234 ntBASIC-0.48□□□□□ -2.49
USF1P22415 SNORD115-2-201ENST00000362842 82 ntBASIC-0.49□□□□□ -2.49
USF1P22415 RNU6-978P-201ENST00000364371 103 ntBASIC-0.49□□□□□ -2.49
USF1P22415 SNORD115-20-201ENST00000365099 82 ntBASIC-0.49□□□□□ -2.49
USF1P22415 AC244250.2-201ENST00000418731 148 ntBASIC-0.49□□□□□ -2.49
USF1P22415 MTND5P22-201ENST00000458380 195 ntBASIC-0.49□□□□□ -2.49
USF1P22415 RNU7-137P-201ENST00000516788 62 ntBASIC-0.49□□□□□ -2.49
USF1P22415 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.49□□□□□ -2.49
USF1P22415 SNORD114-10-201ENST00000363409 72 ntBASIC-0.5□□□□□ -2.49
USF1P22415 RNU6-103P-201ENST00000363686 107 ntBASIC-0.5□□□□□ -2.49
USF1P22415 RNU4-17P-201ENST00000365598 141 ntBASIC-0.5□□□□□ -2.49
USF1P22415 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.5□□□□□ -2.49
USF1P22415 RNU6-811P-201ENST00000384069 107 ntBASIC-0.5□□□□□ -2.49
USF1P22415 RNU6-429P-201ENST00000384582 108 ntBASIC-0.5□□□□□ -2.49
USF1P22415 AC113195.1-201ENST00000579952 141 ntBASIC-0.5□□□□□ -2.49
USF1P22415 MIR6507-201ENST00000613630 70 ntBASIC-0.5□□□□□ -2.49
USF1P22415 RN7SL660P-201ENST00000614852 299 ntBASIC-0.5□□□□□ -2.49
USF1P22415 FTX_2.1-201ENST00000618816 94 ntBASIC-0.5□□□□□ -2.49
USF1P22415 uc_338.36-201ENST00000622331 158 ntBASIC-0.5□□□□□ -2.49
USF1P22415 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.51□□□□□ -2.49
USF1P22415 SNORD114-11-201ENST00000363738 75 ntBASIC-0.51□□□□□ -2.49
USF1P22415 RNY1P2-201ENST00000364820 117 ntBASIC-0.51□□□□□ -2.49
USF1P22415 SNORA32-201ENST00000384072 121 ntBASIC-0.51□□□□□ -2.49
USF1P22415 SNORA32.3-201ENST00000384772 121 ntBASIC-0.51□□□□□ -2.49
USF1P22415 SNORD110-201ENST00000408189 75 ntBASIC-0.51□□□□□ -2.49
USF1P22415 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.51□□□□□ -2.49
USF1P22415 RNU6-651P-201ENST00000411040 105 ntBASIC-0.51□□□□□ -2.49
USF1P22415 RNU6-284P-201ENST00000411105 106 ntBASIC-0.51□□□□□ -2.49
USF1P22415 AC006210.1-201ENST00000424882 111 ntBASIC-0.51□□□□□ -2.49
USF1P22415 BX276092.1-201ENST00000427368 251 ntBASIC-0.51□□□□□ -2.49
USF1P22415 RNA5SP484-201ENST00000458857 111 ntBASIC-0.51□□□□□ -2.49
USF1P22415 SNORD67.1-201ENST00000516618 108 ntBASIC-0.51□□□□□ -2.49
USF1P22415 AL356055.1-201ENST00000602528 446 ntBASIC-0.51□□□□□ -2.49
USF1P22415 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.51□□□□□ -2.49
USF1P22415 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms