Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 MIR548A3-201ENST00000385297 97 ntBASIC1.02□□□□□ -2.25
RXRAP19793 AC113410.1-201ENST00000505029 247 ntBASIC1.02□□□□□ -2.25
RXRAP19793 RNU6-1110P-201ENST00000516462 101 ntBASIC1.02□□□□□ -2.25
RXRAP19793 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.02□□□□□ -2.25
RXRAP19793 MTND5P34-201ENST00000568888 325 ntBASIC1.02□□□□□ -2.25
RXRAP19793 RNU6-94P-201ENST00000607728 107 ntBASIC1.02□□□□□ -2.25
RXRAP19793 Y_RNA.470-201ENST00000384307 117 ntBASIC1.01□□□□□ -2.25
RXRAP19793 RNU6-476P-201ENST00000384726 107 ntBASIC1.01□□□□□ -2.25
RXRAP19793 RNU6-205P-201ENST00000390858 107 ntBASIC1.01□□□□□ -2.25
RXRAP19793 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.01□□□□□ -2.25
RXRAP19793 MIR1827-201ENST00000408549 66 ntBASIC1.01□□□□□ -2.25
RXRAP19793 RNU6-1064P-201ENST00000410626 104 ntBASIC1.01□□□□□ -2.25
RXRAP19793 Y_RNA.629-201ENST00000411368 105 ntBASIC1.01□□□□□ -2.25
RXRAP19793 Y_RNA.649-201ENST00000459077 103 ntBASIC1.01□□□□□ -2.25
RXRAP19793 FAM71BP1-201ENST00000604431 523 ntBASIC1.01□□□□□ -2.25
RXRAP19793 AL670379.3-201ENST00000605040 251 ntBASIC1.01□□□□□ -2.25
RXRAP19793 RNU6-834P-201ENST00000362367 110 ntBASIC1□□□□□ -2.25
RXRAP19793 SNORD115-2-201ENST00000362842 82 ntBASIC1□□□□□ -2.25
RXRAP19793 SNORD115-20-201ENST00000365099 82 ntBASIC1□□□□□ -2.25
RXRAP19793 RNU6-1056P-201ENST00000383996 107 ntBASIC1□□□□□ -2.25
RXRAP19793 RNU6-1144P-201ENST00000384247 104 ntBASIC1□□□□□ -2.25
RXRAP19793 SNORD12C-201ENST00000386307 89 ntBASIC1□□□□□ -2.25
RXRAP19793 MT-TI-201ENST00000387365 69 ntBASIC1□□□□□ -2.25
RXRAP19793 MIR759-201ENST00000390224 91 ntBASIC1□□□□□ -2.25
RXRAP19793 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1□□□□□ -2.25
RXRAP19793 AC067940.1-201ENST00000458411 300 ntBASIC1□□□□□ -2.25
RXRAP19793 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1□□□□□ -2.25
RXRAP19793 RNA5SP33-201ENST00000516687 98 ntBASIC1□□□□□ -2.25
RXRAP19793 MIR3163-201ENST00000581592 73 ntBASIC1□□□□□ -2.25
RXRAP19793 MIR548AE2-201ENST00000583456 67 ntBASIC1□□□□□ -2.25
RXRAP19793 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
RXRAP19793 MIR520E-201ENST00000384867 87 ntBASIC0.99□□□□□ -2.25
RXRAP19793 MIR548A1-201ENST00000385041 97 ntBASIC0.99□□□□□ -2.25
RXRAP19793 RNU6-994P-201ENST00000410507 111 ntBASIC0.99□□□□□ -2.25
RXRAP19793 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.99□□□□□ -2.25
RXRAP19793 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.99□□□□□ -2.25
RXRAP19793 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.99□□□□□ -2.25
RXRAP19793 AL136317.1-201ENST00000612653 226 ntBASIC0.99□□□□□ -2.25
RXRAP19793 RMST_2.1-201ENST00000617263 136 ntBASIC0.99□□□□□ -2.25
RXRAP19793 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.99□□□□□ -2.25
RXRAP19793 Y_RNA.299-201ENST00000364973 94 ntBASIC0.98□□□□□ -2.25
RXRAP19793 SNORA32-201ENST00000384072 121 ntBASIC0.98□□□□□ -2.25
RXRAP19793 SNORA18-201ENST00000384416 132 ntBASIC0.98□□□□□ -2.25
RXRAP19793 RNU6-342P-201ENST00000384521 104 ntBASIC0.98□□□□□ -2.25
RXRAP19793 MIR563-201ENST00000385080 79 ntBASIC0.98□□□□□ -2.25
RXRAP19793 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.98□□□□□ -2.25
RXRAP19793 RNU4-69P-201ENST00000410677 143 ntBASIC0.98□□□□□ -2.25
RXRAP19793 RNU7-62P-201ENST00000458856 62 ntBASIC0.98□□□□□ -2.25
RXRAP19793 snoU13.2-201ENST00000459201 104 ntBASIC0.98□□□□□ -2.25
RXRAP19793 RNU7-6P-201ENST00000516845 62 ntBASIC0.98□□□□□ -2.25
RXRAP19793 AC025627.3-201ENST00000582078 182 ntBASIC0.98□□□□□ -2.25
RXRAP19793 MIR6129-201ENST00000616087 109 ntBASIC0.98□□□□□ -2.25
RXRAP19793 MIR6740-201ENST00000618268 113 ntBASIC0.98□□□□□ -2.25
RXRAP19793 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
RXRAP19793 SNORD116-21-201ENST00000384507 92 ntBASIC0.97□□□□□ -2.25
RXRAP19793 RNU6-429P-201ENST00000384582 108 ntBASIC0.97□□□□□ -2.25
RXRAP19793 MIR588-201ENST00000384900 83 ntBASIC0.97□□□□□ -2.25
RXRAP19793 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.97□□□□□ -2.25
RXRAP19793 RNU6-1223P-201ENST00000517124 104 ntBASIC0.97□□□□□ -2.25
RXRAP19793 MIR6515-201ENST00000619843 57 ntBASIC0.97□□□□□ -2.25
RXRAP19793 RNU6-369P-201ENST00000362515 102 ntBASIC0.96□□□□□ -2.26
RXRAP19793 Y_RNA.35-201ENST00000362601 101 ntBASIC0.96□□□□□ -2.26
RXRAP19793 RNY4P6-201ENST00000363667 96 ntBASIC0.96□□□□□ -2.26
RXRAP19793 RNU6-880P-201ENST00000384526 107 ntBASIC0.96□□□□□ -2.26
RXRAP19793 RNU6-1237P-201ENST00000384777 107 ntBASIC0.96□□□□□ -2.26
RXRAP19793 MIR548D2-201ENST00000384955 97 ntBASIC0.96□□□□□ -2.26
RXRAP19793 RPS29P1-201ENST00000465274 159 ntBASIC0.96□□□□□ -2.26
RXRAP19793 AC007012.1-201ENST00000567192 175 ntBASIC0.96□□□□□ -2.26
RXRAP19793 MIR1-1-201ENST00000362147 71 ntBASIC0.95□□□□□ -2.26
RXRAP19793 RNU6-1325P-201ENST00000364905 105 ntBASIC0.95□□□□□ -2.26
RXRAP19793 RNU6-934P-201ENST00000365154 107 ntBASIC0.95□□□□□ -2.26
RXRAP19793 Y_RNA.362-201ENST00000365518 110 ntBASIC0.95□□□□□ -2.26
RXRAP19793 MIR608-201ENST00000384820 100 ntBASIC0.95□□□□□ -2.26
RXRAP19793 SNORD89-201ENST00000390981 114 ntBASIC0.95□□□□□ -2.26
RXRAP19793 SNORD77B-201ENST00000391112 67 ntBASIC0.95□□□□□ -2.26
RXRAP19793 RNA5SP237-201ENST00000410414 113 ntBASIC0.95□□□□□ -2.26
RXRAP19793 RPS26P5-201ENST00000418544 335 ntBASIC0.95□□□□□ -2.26
RXRAP19793 MIR18B-201ENST00000454574 71 ntBASIC0.95□□□□□ -2.26
RXRAP19793 MIR1270-201ENST00000459320 83 ntBASIC0.95□□□□□ -2.26
RXRAP19793 snoU13.21-201ENST00000459368 105 ntBASIC0.95□□□□□ -2.26
RXRAP19793 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.95□□□□□ -2.26
RXRAP19793 MIR151B-201ENST00000584249 96 ntBASIC0.95□□□□□ -2.26
RXRAP19793 AC087741.2-201ENST00000619415 172 ntBASIC0.95□□□□□ -2.26
RXRAP19793 AL035470.1-201ENST00000622571 220 ntBASIC0.95□□□□□ -2.26
RXRAP19793 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.95□□□□□ -2.26
RXRAP19793 SNORD114-2-201ENST00000363953 78 ntBASIC0.94□□□□□ -2.26
RXRAP19793 RNU6-215P-201ENST00000365169 102 ntBASIC0.94□□□□□ -2.26
RXRAP19793 Y_RNA.344-201ENST00000365381 112 ntBASIC0.94□□□□□ -2.26
RXRAP19793 SNORD20-201ENST00000384550 80 ntBASIC0.94□□□□□ -2.26
RXRAP19793 Y_RNA.549-201ENST00000384657 102 ntBASIC0.94□□□□□ -2.26
RXRAP19793 RNU6-1165P-201ENST00000410119 107 ntBASIC0.94□□□□□ -2.26
RXRAP19793 RNU6-1086P-201ENST00000410930 100 ntBASIC0.94□□□□□ -2.26
RXRAP19793 RNU7-35P-201ENST00000517174 62 ntBASIC0.94□□□□□ -2.26
RXRAP19793 AC211469.2-201ENST00000605461 205 ntBASIC0.94□□□□□ -2.26
RXRAP19793 MIR6857-201ENST00000613267 93 ntBASIC0.94□□□□□ -2.26
RXRAP19793 uc_338.6-201ENST00000613544 171 ntBASIC0.94□□□□□ -2.26
RXRAP19793 AL662814.1-201ENST00000617364 121 ntBASIC0.94□□□□□ -2.26
RXRAP19793 SNORD115-19-201ENST00000363098 82 ntBASIC0.93□□□□□ -2.26
RXRAP19793 SNORD115-18-201ENST00000363293 82 ntBASIC0.93□□□□□ -2.26
RXRAP19793 SNORD115-17-201ENST00000364612 82 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 212.7 ms