Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
PDGFRAP16234 MIR7-2-201ENST00000384970 110 ntBASIC0.36□□□□□ -2.35
PDGFRAP16234 RNU6-239P-201ENST00000390990 99 ntBASIC0.36□□□□□ -2.35
PDGFRAP16234 RNU6-588P-201ENST00000410281 105 ntBASIC0.36□□□□□ -2.35
PDGFRAP16234 RNU6-1086P-201ENST00000410930 100 ntBASIC0.36□□□□□ -2.35
PDGFRAP16234 Y_RNA.793-201ENST00000411222 111 ntBASIC0.36□□□□□ -2.35
PDGFRAP16234 RNU6-138P-201ENST00000515952 107 ntBASIC0.36□□□□□ -2.35
PDGFRAP16234 RNU7-35P-201ENST00000517174 62 ntBASIC0.36□□□□□ -2.35
PDGFRAP16234 MIR3678-201ENST00000578455 94 ntBASIC0.36□□□□□ -2.35
PDGFRAP16234 uc_338.16-201ENST00000621804 95 ntBASIC0.36□□□□□ -2.35
PDGFRAP16234 MIR6844-201ENST00000637122 62 ntBASIC0.36□□□□□ -2.35
PDGFRAP16234 Y_RNA.240-201ENST00000364469 95 ntBASIC0.35□□□□□ -2.35
PDGFRAP16234 RNU6-690P-201ENST00000365242 106 ntBASIC0.35□□□□□ -2.35
PDGFRAP16234 SNORA72.6-201ENST00000384520 129 ntBASIC0.35□□□□□ -2.35
PDGFRAP16234 MIR518A1-201ENST00000385068 85 ntBASIC0.35□□□□□ -2.35
PDGFRAP16234 SNORA40.8-201ENST00000411034 126 ntBASIC0.35□□□□□ -2.35
PDGFRAP16234 AL022718.1-201ENST00000412004 84 ntBASIC0.35□□□□□ -2.35
PDGFRAP16234 AL512326.2-201ENST00000426359 151 ntBASIC0.35□□□□□ -2.35
PDGFRAP16234 RNU7-113P-201ENST00000459273 62 ntBASIC0.35□□□□□ -2.35
PDGFRAP16234 SNORA25.12-201ENST00000516202 82 ntBASIC0.35□□□□□ -2.35
PDGFRAP16234 RNU7-121P-201ENST00000516604 62 ntBASIC0.35□□□□□ -2.35
PDGFRAP16234 AC133485.4-201ENST00000561835 220 ntBASIC0.35□□□□□ -2.35
PDGFRAP16234 MIR3646-201ENST00000578301 84 ntBASIC0.35□□□□□ -2.35
PDGFRAP16234 MIR6779-201ENST00000617283 64 ntBASIC0.35□□□□□ -2.35
PDGFRAP16234 Y_RNA.32-201ENST00000362589 110 ntBASIC0.34□□□□□ -2.36
PDGFRAP16234 SNORD115-2-201ENST00000362842 82 ntBASIC0.34□□□□□ -2.36
PDGFRAP16234 Y_RNA.120-201ENST00000363304 110 ntBASIC0.34□□□□□ -2.36
PDGFRAP16234 RNU6-682P-201ENST00000363843 106 ntBASIC0.34□□□□□ -2.36
PDGFRAP16234 RNU6-200P-201ENST00000364743 107 ntBASIC0.34□□□□□ -2.36
PDGFRAP16234 SNORD115-20-201ENST00000365099 82 ntBASIC0.34□□□□□ -2.36
PDGFRAP16234 Y_RNA.357-201ENST00000365487 109 ntBASIC0.34□□□□□ -2.36
PDGFRAP16234 Y_RNA.552-201ENST00000384665 112 ntBASIC0.34□□□□□ -2.36
PDGFRAP16234 MIR193B-201ENST00000384907 83 ntBASIC0.34□□□□□ -2.36
PDGFRAP16234 RNU7-79P-201ENST00000516082 62 ntBASIC0.34□□□□□ -2.36
PDGFRAP16234 RNU6-240P-201ENST00000516098 97 ntBASIC0.34□□□□□ -2.36
PDGFRAP16234 RNU2-35P-201ENST00000516446 142 ntBASIC0.34□□□□□ -2.36
PDGFRAP16234 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
PDGFRAP16234 SNORA25.16-201ENST00000516741 121 ntBASIC0.34□□□□□ -2.36
PDGFRAP16234 RNU6-861P-201ENST00000516745 106 ntBASIC0.34□□□□□ -2.36
PDGFRAP16234 RNU6-765P-201ENST00000516916 99 ntBASIC0.34□□□□□ -2.36
PDGFRAP16234 RNU6-508P-201ENST00000363231 103 ntBASIC0.33□□□□□ -2.36
PDGFRAP16234 SNORA32-201ENST00000384072 121 ntBASIC0.33□□□□□ -2.36
PDGFRAP16234 Y_RNA.567-201ENST00000384736 106 ntBASIC0.33□□□□□ -2.36
PDGFRAP16234 MIR644A-201ENST00000385262 94 ntBASIC0.33□□□□□ -2.36
PDGFRAP16234 SNORD71-201ENST00000411292 86 ntBASIC0.33□□□□□ -2.36
PDGFRAP16234 RNU7-120P-201ENST00000459334 63 ntBASIC0.33□□□□□ -2.36
PDGFRAP16234 RNA5SP33-201ENST00000516687 98 ntBASIC0.33□□□□□ -2.36
PDGFRAP16234 MIR4305-201ENST00000583252 102 ntBASIC0.33□□□□□ -2.36
PDGFRAP16234 SNORA25.18-201ENST00000607153 114 ntBASIC0.33□□□□□ -2.36
PDGFRAP16234 AC011603.4-201ENST00000611325 277 ntBASIC0.33□□□□□ -2.36
PDGFRAP16234 SNORD44.1-201ENST00000363202 61 ntBASIC0.32□□□□□ -2.36
PDGFRAP16234 Y_RNA.476-201ENST00000384347 108 ntBASIC0.32□□□□□ -2.36
PDGFRAP16234 RNU6-291P-201ENST00000384720 107 ntBASIC0.32□□□□□ -2.36
PDGFRAP16234 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
PDGFRAP16234 snosnR66.1-201ENST00000391095 99 ntBASIC0.32□□□□□ -2.36
PDGFRAP16234 Y_RNA.651-201ENST00000459380 103 ntBASIC0.32□□□□□ -2.36
PDGFRAP16234 MTND5P34-201ENST00000568888 325 ntBASIC0.32□□□□□ -2.36
PDGFRAP16234 MIR1273G-201ENST00000577677 100 ntBASIC0.32□□□□□ -2.36
PDGFRAP16234 MIR548AE2-201ENST00000583456 67 ntBASIC0.32□□□□□ -2.36
PDGFRAP16234 DNAJC19P2-201ENST00000593340 302 ntBASIC0.32□□□□□ -2.36
PDGFRAP16234 SNORA36.1-201ENST00000363424 132 ntBASIC0.31□□□□□ -2.36
PDGFRAP16234 SNORD118-201ENST00000363593 134 ntBASIC0.31□□□□□ -2.36
PDGFRAP16234 RNU6-1327P-201ENST00000365302 105 ntBASIC0.31□□□□□ -2.36
PDGFRAP16234 SNORA8.2-201ENST00000384372 139 ntBASIC0.31□□□□□ -2.36
PDGFRAP16234 Y_RNA.531-201ENST00000384589 121 ntBASIC0.31□□□□□ -2.36
PDGFRAP16234 MTATP6P21-201ENST00000440681 189 ntBASIC0.31□□□□□ -2.36
PDGFRAP16234 MIR1270-201ENST00000459320 83 ntBASIC0.31□□□□□ -2.36
PDGFRAP16234 SNORA31.14-201ENST00000516728 116 ntBASIC0.31□□□□□ -2.36
PDGFRAP16234 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
PDGFRAP16234 Y_RNA.251-201ENST00000364551 99 ntBASIC0.3□□□□□ -2.36
PDGFRAP16234 RNU6-1318P-201ENST00000365389 103 ntBASIC0.3□□□□□ -2.36
PDGFRAP16234 Y_RNA.441-201ENST00000384123 112 ntBASIC0.3□□□□□ -2.36
PDGFRAP16234 SNORD37.2-201ENST00000391075 66 ntBASIC0.3□□□□□ -2.36
PDGFRAP16234 AC108740.1-201ENST00000498629 225 ntBASIC0.3□□□□□ -2.36
PDGFRAP16234 AC074198.2-201ENST00000508153 258 ntBASIC0.3□□□□□ -2.36
PDGFRAP16234 Y_RNA.686-201ENST00000516548 134 ntBASIC0.3□□□□□ -2.36
PDGFRAP16234 SNORD67.1-201ENST00000516618 108 ntBASIC0.3□□□□□ -2.36
PDGFRAP16234 RNU7-137P-201ENST00000516788 62 ntBASIC0.3□□□□□ -2.36
PDGFRAP16234 AC022523.2-201ENST00000561045 150 ntBASIC0.3□□□□□ -2.36
PDGFRAP16234 AC138907.4-201ENST00000570107 226 ntBASIC0.3□□□□□ -2.36
PDGFRAP16234 AL359881.1-201ENST00000602916 267 ntBASIC0.3□□□□□ -2.36
PDGFRAP16234 AC021443.1-201ENST00000604478 211 ntBASIC0.3□□□□□ -2.36
PDGFRAP16234 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.3□□□□□ -2.36
PDGFRAP16234 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.3□□□□□ -2.36
PDGFRAP16234 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
PDGFRAP16234 Y_RNA.29-201ENST00000362570 113 ntBASIC0.29□□□□□ -2.36
PDGFRAP16234 Y_RNA.366-201ENST00000365540 102 ntBASIC0.29□□□□□ -2.36
PDGFRAP16234 Y_RNA.536-201ENST00000384621 113 ntBASIC0.29□□□□□ -2.36
PDGFRAP16234 Y_RNA.584-201ENST00000391090 114 ntBASIC0.29□□□□□ -2.36
PDGFRAP16234 RNU7-123P-201ENST00000515911 60 ntBASIC0.29□□□□□ -2.36
PDGFRAP16234 Y_RNA.662-201ENST00000516028 97 ntBASIC0.29□□□□□ -2.36
PDGFRAP16234 RNU6-469P-201ENST00000516253 101 ntBASIC0.29□□□□□ -2.36
PDGFRAP16234 Y_RNA.697-201ENST00000516776 113 ntBASIC0.29□□□□□ -2.36
PDGFRAP16234 SNORA81.3-201ENST00000517283 198 ntBASIC0.29□□□□□ -2.36
PDGFRAP16234 RNA5SP133-201ENST00000363368 119 ntBASIC0.28□□□□□ -2.36
PDGFRAP16234 Y_RNA.174-201ENST00000363781 105 ntBASIC0.28□□□□□ -2.36
PDGFRAP16234 RNU6-309P-201ENST00000364573 106 ntBASIC0.28□□□□□ -2.36
PDGFRAP16234 Y_RNA.257-201ENST00000364596 102 ntBASIC0.28□□□□□ -2.36
PDGFRAP16234 Y_RNA.272-201ENST00000364696 102 ntBASIC0.28□□□□□ -2.36
PDGFRAP16234 RNU6-535P-201ENST00000384722 107 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms