Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 MIR516A1-201ENST00000385033 90 ntBASIC2.28□□□□□ -2.04
NID1P14543 RNU6-466P-201ENST00000391224 103 ntBASIC2.28□□□□□ -2.04
NID1P14543 AC004965.1-201ENST00000413033 213 ntBASIC2.28□□□□□ -2.04
NID1P14543 RNA5SP320-201ENST00000516263 124 ntBASIC2.28□□□□□ -2.04
NID1P14543 SNORD92-201ENST00000585078 85 ntBASIC2.28□□□□□ -2.04
NID1P14543 U4.3-201ENST00000621047 82 ntBASIC2.28□□□□□ -2.04
NID1P14543 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NID1P14543 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.27□□□□□ -2.05
NID1P14543 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
NID1P14543 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
NID1P14543 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
NID1P14543 RNA5SP289-201ENST00000362332 137 ntBASIC2.27□□□□□ -2.05
NID1P14543 RNU6-396P-201ENST00000365369 105 ntBASIC2.27□□□□□ -2.05
NID1P14543 RNU6-132P-201ENST00000383863 107 ntBASIC2.27□□□□□ -2.05
NID1P14543 SNORA3.2-201ENST00000408221 125 ntBASIC2.27□□□□□ -2.05
NID1P14543 AC015818.7-201ENST00000428754 109 ntBASIC2.27□□□□□ -2.05
NID1P14543 RNU6-634P-201ENST00000459134 106 ntBASIC2.27□□□□□ -2.05
NID1P14543 RNU6-75P-201ENST00000515944 104 ntBASIC2.27□□□□□ -2.05
NID1P14543 RNU6-237P-201ENST00000515985 71 ntBASIC2.27□□□□□ -2.05
NID1P14543 MIR6740-201ENST00000618268 113 ntBASIC2.27□□□□□ -2.05
NID1P14543 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.27□□□□□ -2.05
NID1P14543 AC016717.2-201ENST00000609089 5141 ntBASIC2.26□□□□□ -2.05
NID1P14543 RNU6-208P-201ENST00000362431 107 ntBASIC2.26□□□□□ -2.05
NID1P14543 SNORA67.1-201ENST00000364749 141 ntBASIC2.26□□□□□ -2.05
NID1P14543 MIR194-1-201ENST00000384892 85 ntBASIC2.26□□□□□ -2.05
NID1P14543 MIR504-201ENST00000385065 83 ntBASIC2.26□□□□□ -2.05
NID1P14543 AC245517.4-201ENST00000448601 281 ntBASIC2.26□□□□□ -2.05
NID1P14543 RNU6-687P-201ENST00000516443 89 ntBASIC2.26□□□□□ -2.05
NID1P14543 MIR4264-201ENST00000583520 66 ntBASIC2.26□□□□□ -2.05
NID1P14543 AC067747.1-201ENST00000608026 250 ntBASIC2.26□□□□□ -2.05
NID1P14543 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NID1P14543 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
NID1P14543 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NID1P14543 MIR30D-201ENST00000362283 70 ntBASIC2.25□□□□□ -2.05
NID1P14543 RNA5SP259-201ENST00000365541 109 ntBASIC2.25□□□□□ -2.05
NID1P14543 RNU1-52P-201ENST00000384190 164 ntBASIC2.25□□□□□ -2.05
NID1P14543 MIR520H-201ENST00000385126 88 ntBASIC2.25□□□□□ -2.05
NID1P14543 RNU6-1165P-201ENST00000410119 107 ntBASIC2.25□□□□□ -2.05
NID1P14543 RNU6-303P-201ENST00000517091 106 ntBASIC2.25□□□□□ -2.05
NID1P14543 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.25□□□□□ -2.05
NID1P14543 RNU5F-1-201ENST00000362507 117 ntBASIC2.24□□□□□ -2.05
NID1P14543 RNU6-649P-201ENST00000384463 107 ntBASIC2.24□□□□□ -2.05
NID1P14543 AL359511.1-201ENST00000402970 211 ntBASIC2.24□□□□□ -2.05
NID1P14543 AP000942.3-201ENST00000603702 160 ntBASIC2.24□□□□□ -2.05
NID1P14543 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.23□□□□□ -2.05
NID1P14543 RNU6-53P-201ENST00000365367 106 ntBASIC2.23□□□□□ -2.05
NID1P14543 MIR513A1-201ENST00000385138 129 ntBASIC2.23□□□□□ -2.05
NID1P14543 MIR524-201ENST00000385242 87 ntBASIC2.23□□□□□ -2.05
NID1P14543 MT-TF-201ENST00000387314 71 ntBASIC2.23□□□□□ -2.05
NID1P14543 RNU6-587P-201ENST00000391282 106 ntBASIC2.23□□□□□ -2.05
NID1P14543 MIR1265-201ENST00000408444 86 ntBASIC2.23□□□□□ -2.05
NID1P14543 RNA5SP181-201ENST00000410246 98 ntBASIC2.23□□□□□ -2.05
NID1P14543 RNA5SP450-201ENST00000411206 102 ntBASIC2.23□□□□□ -2.05
NID1P14543 RNU7-62P-201ENST00000458856 62 ntBASIC2.23□□□□□ -2.05
NID1P14543 RNA5SP82-201ENST00000516707 92 ntBASIC2.23□□□□□ -2.05
NID1P14543 MIR3192-201ENST00000584920 77 ntBASIC2.23□□□□□ -2.05
NID1P14543 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NID1P14543 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
NID1P14543 ZNF658B-202ENST00000615961 3375 ntBASIC2.22□□□□□ -2.05
NID1P14543 MIRLET7F1-201ENST00000362202 87 ntBASIC2.22□□□□□ -2.05
NID1P14543 SNORD41-201ENST00000386967 70 ntBASIC2.22□□□□□ -2.05
NID1P14543 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
NID1P14543 MIR1302-7-201ENST00000408841 72 ntBASIC2.22□□□□□ -2.05
NID1P14543 MIR1291-201ENST00000627649 87 ntBASIC2.22□□□□□ -2.05
NID1P14543 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
NID1P14543 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
NID1P14543 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
NID1P14543 RNU6-205P-201ENST00000390858 107 ntBASIC2.21□□□□□ -2.06
NID1P14543 RNU2-59P-201ENST00000410482 191 ntBASIC2.21□□□□□ -2.06
NID1P14543 AC074348.1-201ENST00000426503 132 ntBASIC2.21□□□□□ -2.06
NID1P14543 RNU6-922P-201ENST00000516753 99 ntBASIC2.21□□□□□ -2.06
NID1P14543 AC245884.12-201ENST00000615364 59 ntBASIC2.21□□□□□ -2.06
NID1P14543 MIR21-201ENST00000362134 72 ntBASIC2.2□□□□□ -2.06
NID1P14543 Y_RNA.12-201ENST00000362393 112 ntBASIC2.2□□□□□ -2.06
NID1P14543 RNU4-58P-201ENST00000363192 141 ntBASIC2.2□□□□□ -2.06
NID1P14543 SNORA25.3-201ENST00000363205 127 ntBASIC2.2□□□□□ -2.06
NID1P14543 MIR518E-201ENST00000385252 88 ntBASIC2.2□□□□□ -2.06
NID1P14543 MT-TN-201ENST00000387400 73 ntBASIC2.2□□□□□ -2.06
NID1P14543 SNORD30.1-201ENST00000391309 70 ntBASIC2.2□□□□□ -2.06
NID1P14543 Y_RNA.596-201ENST00000410462 109 ntBASIC2.2□□□□□ -2.06
NID1P14543 SNORD63B-201ENST00000411005 70 ntBASIC2.2□□□□□ -2.06
NID1P14543 RNU7-106P-201ENST00000459514 67 ntBASIC2.2□□□□□ -2.06
NID1P14543 MIR2115-201ENST00000516657 100 ntBASIC2.2□□□□□ -2.06
NID1P14543 RNU6-531P-201ENST00000516694 104 ntBASIC2.2□□□□□ -2.06
NID1P14543 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.2□□□□□ -2.06
NID1P14543 MIR664A-201ENST00000626086 82 ntBASIC2.2□□□□□ -2.06
NID1P14543 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NID1P14543 RNU6-957P-201ENST00000363652 99 ntBASIC2.19□□□□□ -2.06
NID1P14543 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.19□□□□□ -2.06
NID1P14543 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.19□□□□□ -2.06
NID1P14543 MIR4529-201ENST00000578110 78 ntBASIC2.19□□□□□ -2.06
NID1P14543 YWHAEP2-201ENST00000580066 112 ntBASIC2.19□□□□□ -2.06
NID1P14543 YWHAEP3-201ENST00000582767 121 ntBASIC2.19□□□□□ -2.06
NID1P14543 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
NID1P14543 MIR764-201ENST00000390811 85 ntBASIC2.18□□□□□ -2.06
NID1P14543 MIR1289-2-201ENST00000408360 111 ntBASIC2.18□□□□□ -2.06
NID1P14543 RNU4-53P-201ENST00000410828 140 ntBASIC2.18□□□□□ -2.06
NID1P14543 snoU13.15-201ENST00000459407 104 ntBASIC2.18□□□□□ -2.06
NID1P14543 AC026436.1-201ENST00000510537 270 ntBASIC2.18□□□□□ -2.06
NID1P14543 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms