Protein–RNA interactions for Protein: P12109

COL6A1, Collagen alpha-1(VI) chain, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1P12109 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.83□□□□□ -2.12
COL6A1P12109 RNU6-1313P-201ENST00000362622 102 ntBASIC1.82□□□□□ -2.12
COL6A1P12109 RNU6-170P-201ENST00000362832 104 ntBASIC1.82□□□□□ -2.12
COL6A1P12109 SNORD1A-201ENST00000364968 72 ntBASIC1.82□□□□□ -2.12
COL6A1P12109 RNU6-1201P-201ENST00000384227 107 ntBASIC1.82□□□□□ -2.12
COL6A1P12109 RNU6-342P-201ENST00000384521 104 ntBASIC1.82□□□□□ -2.12
COL6A1P12109 AC004941.2-201ENST00000427009 228 ntBASIC1.82□□□□□ -2.12
COL6A1P12109 RN7SL274P-201ENST00000492268 272 ntBASIC1.82□□□□□ -2.12
COL6A1P12109 RNU7-41P-201ENST00000515917 61 ntBASIC1.82□□□□□ -2.12
COL6A1P12109 Y_RNA.659-201ENST00000515994 113 ntBASIC1.82□□□□□ -2.12
COL6A1P12109 RNU7-2P-201ENST00000516096 62 ntBASIC1.82□□□□□ -2.12
COL6A1P12109 AL442128.1-201ENST00000615151 90 ntBASIC1.82□□□□□ -2.12
COL6A1P12109 AL161722.3-201ENST00000605789 2983 ntBASIC1.81□□□□□ -2.12
COL6A1P12109 SNORD73B-201ENST00000364394 72 ntBASIC1.81□□□□□ -2.12
COL6A1P12109 Y_RNA.342-201ENST00000365352 113 ntBASIC1.81□□□□□ -2.12
COL6A1P12109 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.81□□□□□ -2.12
COL6A1P12109 RNU6-1086P-201ENST00000410930 100 ntBASIC1.81□□□□□ -2.12
COL6A1P12109 AL353813.1-201ENST00000440700 253 ntBASIC1.81□□□□□ -2.12
COL6A1P12109 RNU6-922P-201ENST00000516753 99 ntBASIC1.81□□□□□ -2.12
COL6A1P12109 RNU6-844P-201ENST00000517175 102 ntBASIC1.81□□□□□ -2.12
COL6A1P12109 RNU6-902P-201ENST00000517212 91 ntBASIC1.81□□□□□ -2.12
COL6A1P12109 MIR4421-201ENST00000578133 69 ntBASIC1.81□□□□□ -2.12
COL6A1P12109 RNU6-42P-201ENST00000384165 107 ntBASIC1.8□□□□□ -2.12
COL6A1P12109 RNU6-795P-201ENST00000516323 103 ntBASIC1.8□□□□□ -2.12
COL6A1P12109 RNA5SP480-201ENST00000516840 109 ntBASIC1.8□□□□□ -2.12
COL6A1P12109 AC012531.4-201ENST00000616509 177 ntBASIC1.8□□□□□ -2.12
COL6A1P12109 RNY1P7-201ENST00000384743 110 ntBASIC1.79□□□□□ -2.12
COL6A1P12109 MIR206-201ENST00000384872 86 ntBASIC1.79□□□□□ -2.12
COL6A1P12109 SNORD41-201ENST00000386967 70 ntBASIC1.79□□□□□ -2.12
COL6A1P12109 RNA5SP237-201ENST00000410414 113 ntBASIC1.79□□□□□ -2.12
COL6A1P12109 RNU7-79P-201ENST00000516082 62 ntBASIC1.79□□□□□ -2.12
COL6A1P12109 MIR3122-201ENST00000577243 73 ntBASIC1.79□□□□□ -2.12
COL6A1P12109 AC015688.6-201ENST00000577737 104 ntBASIC1.79□□□□□ -2.12
COL6A1P12109 Y_RNA.95-201ENST00000363079 95 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 RNU6-865P-201ENST00000364772 107 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 SNORD114-22-201ENST00000365423 72 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 RNU6-447P-201ENST00000410293 104 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 RNU6-1118P-201ENST00000410382 104 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 RNU6-1076P-201ENST00000410397 104 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 RNU6-355P-201ENST00000410427 104 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 RNU6-791P-201ENST00000410467 104 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 RNU6-705P-201ENST00000410601 104 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 RNU6-1100P-201ENST00000410691 104 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 RNU6-860P-201ENST00000410860 104 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 RNU6-1217P-201ENST00000411276 104 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 RNU6-785P-201ENST00000411324 104 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 MRPL35P3-201ENST00000421557 364 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 RPL39P39-201ENST00000455840 151 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 RNU7-61P-201ENST00000515897 61 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 MIR4439-201ENST00000583746 80 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 GHRLOS.1-201ENST00000610995 70 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 U6.90-201ENST00000614007 104 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 U6.70-201ENST00000620287 104 ntBASIC1.78□□□□□ -2.12
COL6A1P12109 SNORD114-10-201ENST00000363409 72 ntBASIC1.77□□□□□ -2.13
COL6A1P12109 RNU6-53P-201ENST00000365367 106 ntBASIC1.77□□□□□ -2.13
COL6A1P12109 SNORA26.2-201ENST00000390922 122 ntBASIC1.77□□□□□ -2.13
COL6A1P12109 SNORA67.6-201ENST00000391093 99 ntBASIC1.77□□□□□ -2.13
COL6A1P12109 RNU6-644P-201ENST00000391155 98 ntBASIC1.77□□□□□ -2.13
COL6A1P12109 SNORD67.1-201ENST00000516618 108 ntBASIC1.77□□□□□ -2.13
COL6A1P12109 Y_RNA.705-201ENST00000516862 110 ntBASIC1.77□□□□□ -2.13
COL6A1P12109 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.77□□□□□ -2.13
COL6A1P12109 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
COL6A1P12109 ZNF209P-201ENST00000593450 2304 ntBASIC1.76□□□□□ -2.13
COL6A1P12109 RNU6-1134P-201ENST00000365156 101 ntBASIC1.76□□□□□ -2.13
COL6A1P12109 RNU6-1237P-201ENST00000384777 107 ntBASIC1.76□□□□□ -2.13
COL6A1P12109 AC090844.1-201ENST00000422019 156 ntBASIC1.76□□□□□ -2.13
COL6A1P12109 RPS29P28-201ENST00000446439 141 ntBASIC1.76□□□□□ -2.13
COL6A1P12109 RNA5SP220-201ENST00000516298 104 ntBASIC1.76□□□□□ -2.13
COL6A1P12109 AC026421.1-201ENST00000519101 163 ntBASIC1.76□□□□□ -2.13
COL6A1P12109 SNORD38.1-201ENST00000363863 68 ntBASIC1.75□□□□□ -2.13
COL6A1P12109 RNU6-396P-201ENST00000365369 105 ntBASIC1.75□□□□□ -2.13
COL6A1P12109 Y_RNA.448-201ENST00000384185 108 ntBASIC1.75□□□□□ -2.13
COL6A1P12109 MIR517C-201ENST00000385103 95 ntBASIC1.75□□□□□ -2.13
COL6A1P12109 AC027119.1-201ENST00000440877 241 ntBASIC1.75□□□□□ -2.13
COL6A1P12109 RPS29P23-201ENST00000458635 123 ntBASIC1.75□□□□□ -2.13
COL6A1P12109 RNU7-137P-201ENST00000516788 62 ntBASIC1.75□□□□□ -2.13
COL6A1P12109 AL096861.1-201ENST00000610899 123 ntBASIC1.75□□□□□ -2.13
COL6A1P12109 U7.3-201ENST00000616123 62 ntBASIC1.75□□□□□ -2.13
COL6A1P12109 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.75□□□□□ -2.13
COL6A1P12109 Y_RNA.290-201ENST00000364879 114 ntBASIC1.74□□□□□ -2.13
COL6A1P12109 SNORD38.2-201ENST00000384470 69 ntBASIC1.74□□□□□ -2.13
COL6A1P12109 RNU6-997P-201ENST00000384725 107 ntBASIC1.74□□□□□ -2.13
COL6A1P12109 RNU6-972P-201ENST00000391208 107 ntBASIC1.74□□□□□ -2.13
COL6A1P12109 MIR1323-201ENST00000408090 73 ntBASIC1.74□□□□□ -2.13
COL6A1P12109 RNY4P29-201ENST00000410801 97 ntBASIC1.74□□□□□ -2.13
COL6A1P12109 MIR4777-201ENST00000583710 86 ntBASIC1.74□□□□□ -2.13
COL6A1P12109 MIR3192-201ENST00000584920 77 ntBASIC1.74□□□□□ -2.13
COL6A1P12109 AC091304.10-201ENST00000641554 121 ntBASIC1.74□□□□□ -2.13
COL6A1P12109 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
COL6A1P12109 MIR302D-201ENST00000362275 68 ntBASIC1.73□□□□□ -2.13
COL6A1P12109 Y_RNA.98-201ENST00000363109 102 ntBASIC1.73□□□□□ -2.13
COL6A1P12109 SNORD48-201ENST00000364953 64 ntBASIC1.73□□□□□ -2.13
COL6A1P12109 MIR450A2-201ENST00000385022 100 ntBASIC1.73□□□□□ -2.13
COL6A1P12109 RNU6-887P-201ENST00000410660 100 ntBASIC1.73□□□□□ -2.13
COL6A1P12109 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.73□□□□□ -2.13
COL6A1P12109 RNU6-947P-201ENST00000516264 106 ntBASIC1.73□□□□□ -2.13
COL6A1P12109 RNU6-762P-201ENST00000517107 102 ntBASIC1.73□□□□□ -2.13
COL6A1P12109 AC141846.1-201ENST00000568348 142 ntBASIC1.73□□□□□ -2.13
COL6A1P12109 AC024614.2-201ENST00000577584 372 ntBASIC1.73□□□□□ -2.13
COL6A1P12109 AL078603.1-201ENST00000603824 313 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms