Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MIR1273G-201ENST00000577677 100 ntBASIC0.45□□□□□ -2.34
RAB40ALP0C0E4 MIR4491-201ENST00000581087 68 ntBASIC0.45□□□□□ -2.34
RAB40ALP0C0E4 AC011603.4-201ENST00000611325 277 ntBASIC0.45□□□□□ -2.34
RAB40ALP0C0E4 MIR6082-201ENST00000613604 109 ntBASIC0.45□□□□□ -2.34
RAB40ALP0C0E4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.45□□□□□ -2.34
RAB40ALP0C0E4 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
RAB40ALP0C0E4 RNU6-200P-201ENST00000364743 107 ntBASIC0.44□□□□□ -2.34
RAB40ALP0C0E4 Y_RNA.470-201ENST00000384307 117 ntBASIC0.44□□□□□ -2.34
RAB40ALP0C0E4 RNU6-138P-201ENST00000515952 107 ntBASIC0.44□□□□□ -2.34
RAB40ALP0C0E4 RNU7-79P-201ENST00000516082 62 ntBASIC0.44□□□□□ -2.34
RAB40ALP0C0E4 RNU6-469P-201ENST00000516253 101 ntBASIC0.44□□□□□ -2.34
RAB40ALP0C0E4 MIR3678-201ENST00000578455 94 ntBASIC0.44□□□□□ -2.34
RAB40ALP0C0E4 AC243829.6-201ENST00000612652 106 ntBASIC0.44□□□□□ -2.34
RAB40ALP0C0E4 uc_338.16-201ENST00000621804 95 ntBASIC0.44□□□□□ -2.34
RAB40ALP0C0E4 RNU6-1318P-201ENST00000365389 103 ntBASIC0.43□□□□□ -2.34
RAB40ALP0C0E4 SNORA25.12-201ENST00000516202 82 ntBASIC0.43□□□□□ -2.34
RAB40ALP0C0E4 RNU6-765P-201ENST00000516916 99 ntBASIC0.43□□□□□ -2.34
RAB40ALP0C0E4 RNA5SP94-201ENST00000516917 108 ntBASIC0.43□□□□□ -2.34
RAB40ALP0C0E4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.43□□□□□ -2.34
RAB40ALP0C0E4 MIR4305-201ENST00000583252 102 ntBASIC0.43□□□□□ -2.34
RAB40ALP0C0E4 DNAJC19P2-201ENST00000593340 302 ntBASIC0.43□□□□□ -2.34
RAB40ALP0C0E4 MIR3658-201ENST00000636291 56 ntBASIC0.43□□□□□ -2.34
RAB40ALP0C0E4 Y_RNA.240-201ENST00000364469 95 ntBASIC0.42□□□□□ -2.34
RAB40ALP0C0E4 SNORD18B-201ENST00000365659 72 ntBASIC0.42□□□□□ -2.34
RAB40ALP0C0E4 SNORA32-201ENST00000384072 121 ntBASIC0.42□□□□□ -2.34
RAB40ALP0C0E4 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
RAB40ALP0C0E4 snosnR66.1-201ENST00000391095 99 ntBASIC0.42□□□□□ -2.34
RAB40ALP0C0E4 AC096949.1-201ENST00000412047 152 ntBASIC0.42□□□□□ -2.34
RAB40ALP0C0E4 RNU7-120P-201ENST00000459334 63 ntBASIC0.42□□□□□ -2.34
RAB40ALP0C0E4 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
RAB40ALP0C0E4 RNU6-240P-201ENST00000516098 97 ntBASIC0.42□□□□□ -2.34
RAB40ALP0C0E4 RNU6-861P-201ENST00000516745 106 ntBASIC0.42□□□□□ -2.34
RAB40ALP0C0E4 RNU7-35P-201ENST00000517174 62 ntBASIC0.42□□□□□ -2.34
RAB40ALP0C0E4 AC133485.4-201ENST00000561835 220 ntBASIC0.42□□□□□ -2.34
RAB40ALP0C0E4 SNORD115-2-201ENST00000362842 82 ntBASIC0.41□□□□□ -2.34
RAB40ALP0C0E4 Y_RNA.120-201ENST00000363304 110 ntBASIC0.41□□□□□ -2.34
RAB40ALP0C0E4 RNA5SP517-201ENST00000364724 117 ntBASIC0.41□□□□□ -2.34
RAB40ALP0C0E4 SNORD115-20-201ENST00000365099 82 ntBASIC0.41□□□□□ -2.34
RAB40ALP0C0E4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.41□□□□□ -2.34
RAB40ALP0C0E4 Y_RNA.567-201ENST00000384736 106 ntBASIC0.41□□□□□ -2.34
RAB40ALP0C0E4 SNORD71-201ENST00000411292 86 ntBASIC0.41□□□□□ -2.34
RAB40ALP0C0E4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.41□□□□□ -2.34
RAB40ALP0C0E4 Y_RNA.662-201ENST00000516028 97 ntBASIC0.41□□□□□ -2.34
RAB40ALP0C0E4 RNU7-121P-201ENST00000516604 62 ntBASIC0.41□□□□□ -2.34
RAB40ALP0C0E4 AC138907.4-201ENST00000570107 226 ntBASIC0.41□□□□□ -2.34
RAB40ALP0C0E4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.41□□□□□ -2.34
RAB40ALP0C0E4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.4□□□□□ -2.35
RAB40ALP0C0E4 Y_RNA.29-201ENST00000362570 113 ntBASIC0.4□□□□□ -2.35
RAB40ALP0C0E4 Y_RNA.584-201ENST00000391090 114 ntBASIC0.4□□□□□ -2.35
RAB40ALP0C0E4 SNORA40.8-201ENST00000411034 126 ntBASIC0.4□□□□□ -2.35
RAB40ALP0C0E4 AL512326.2-201ENST00000426359 151 ntBASIC0.4□□□□□ -2.35
RAB40ALP0C0E4 SNORA25.16-201ENST00000516741 121 ntBASIC0.4□□□□□ -2.35
RAB40ALP0C0E4 Y_RNA.697-201ENST00000516776 113 ntBASIC0.4□□□□□ -2.35
RAB40ALP0C0E4 RNU2-60P-201ENST00000517290 128 ntBASIC0.4□□□□□ -2.35
RAB40ALP0C0E4 AC021443.1-201ENST00000604478 211 ntBASIC0.4□□□□□ -2.35
RAB40ALP0C0E4 MIR924-201ENST00000638017 53 ntBASIC0.4□□□□□ -2.35
RAB40ALP0C0E4 Y_RNA.174-201ENST00000363781 105 ntBASIC0.39□□□□□ -2.35
RAB40ALP0C0E4 Y_RNA.531-201ENST00000384589 121 ntBASIC0.39□□□□□ -2.35
RAB40ALP0C0E4 MIR644A-201ENST00000385262 94 ntBASIC0.39□□□□□ -2.35
RAB40ALP0C0E4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.39□□□□□ -2.35
RAB40ALP0C0E4 RNU2-35P-201ENST00000516446 142 ntBASIC0.39□□□□□ -2.35
RAB40ALP0C0E4 Y_RNA.700-201ENST00000516806 100 ntBASIC0.39□□□□□ -2.35
RAB40ALP0C0E4 DEFB131E-201ENST00000532329 154 ntBASIC0.39□□□□□ -2.35
RAB40ALP0C0E4 MIR548AE2-201ENST00000583456 67 ntBASIC0.39□□□□□ -2.35
RAB40ALP0C0E4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
RAB40ALP0C0E4 RNU7-164P-201ENST00000459221 62 ntBASIC0.38□□□□□ -2.35
RAB40ALP0C0E4 SNORA81.3-201ENST00000517283 198 ntBASIC0.38□□□□□ -2.35
RAB40ALP0C0E4 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
RAB40ALP0C0E4 Y_RNA.32-201ENST00000362589 110 ntBASIC0.37□□□□□ -2.35
RAB40ALP0C0E4 RNA5SP325-201ENST00000363756 130 ntBASIC0.37□□□□□ -2.35
RAB40ALP0C0E4 RNU6-682P-201ENST00000363843 106 ntBASIC0.37□□□□□ -2.35
RAB40ALP0C0E4 Y_RNA.257-201ENST00000364596 102 ntBASIC0.37□□□□□ -2.35
RAB40ALP0C0E4 Y_RNA.272-201ENST00000364696 102 ntBASIC0.37□□□□□ -2.35
RAB40ALP0C0E4 SNORA8.2-201ENST00000384372 139 ntBASIC0.37□□□□□ -2.35
RAB40ALP0C0E4 Y_RNA.536-201ENST00000384621 113 ntBASIC0.37□□□□□ -2.35
RAB40ALP0C0E4 RNU6-291P-201ENST00000384720 107 ntBASIC0.37□□□□□ -2.35
RAB40ALP0C0E4 RNU6-535P-201ENST00000384722 107 ntBASIC0.37□□□□□ -2.35
RAB40ALP0C0E4 MIR518A1-201ENST00000385068 85 ntBASIC0.37□□□□□ -2.35
RAB40ALP0C0E4 RNU6-1135P-201ENST00000411083 103 ntBASIC0.37□□□□□ -2.35
RAB40ALP0C0E4 MTND5P34-201ENST00000568888 325 ntBASIC0.37□□□□□ -2.35
RAB40ALP0C0E4 SNORA25.18-201ENST00000607153 114 ntBASIC0.37□□□□□ -2.35
RAB40ALP0C0E4 MIR330-201ENST00000362196 94 ntBASIC0.36□□□□□ -2.35
RAB40ALP0C0E4 RNA5SP133-201ENST00000363368 119 ntBASIC0.36□□□□□ -2.35
RAB40ALP0C0E4 Y_RNA.690-201ENST00000516603 95 ntBASIC0.36□□□□□ -2.35
RAB40ALP0C0E4 SNORD67.1-201ENST00000516618 108 ntBASIC0.36□□□□□ -2.35
RAB40ALP0C0E4 SNORA31.14-201ENST00000516728 116 ntBASIC0.36□□□□□ -2.35
RAB40ALP0C0E4 AC112693.2-201ENST00000556538 232 ntBASIC0.36□□□□□ -2.35
RAB40ALP0C0E4 U6.109-201ENST00000636749 87 ntBASIC0.36□□□□□ -2.35
RAB40ALP0C0E4 RNU4-58P-201ENST00000363192 141 ntBASIC0.35□□□□□ -2.35
RAB40ALP0C0E4 RNY1P11-201ENST00000363759 113 ntBASIC0.35□□□□□ -2.35
RAB40ALP0C0E4 Y_RNA.441-201ENST00000384123 112 ntBASIC0.35□□□□□ -2.35
RAB40ALP0C0E4 RNU7-123P-201ENST00000515911 60 ntBASIC0.35□□□□□ -2.35
RAB40ALP0C0E4 RNU6-1194P-201ENST00000516208 104 ntBASIC0.35□□□□□ -2.35
RAB40ALP0C0E4 RNU6-531P-201ENST00000516694 104 ntBASIC0.35□□□□□ -2.35
RAB40ALP0C0E4 RNU6-135P-201ENST00000516769 101 ntBASIC0.35□□□□□ -2.35
RAB40ALP0C0E4 RNU7-137P-201ENST00000516788 62 ntBASIC0.35□□□□□ -2.35
RAB40ALP0C0E4 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.35□□□□□ -2.35
RAB40ALP0C0E4 AC004792.1-201ENST00000614523 137 ntBASIC0.35□□□□□ -2.35
RAB40ALP0C0E4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.35□□□□□ -2.35
RAB40ALP0C0E4 RNU6-1229P-201ENST00000364295 107 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms