Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SNORD26-201ENST00000384147 75 ntBASIC1.2□□□□□ -2.22
HOXC6P09630 RNU6-616P-201ENST00000384353 107 ntBASIC1.2□□□□□ -2.22
HOXC6P09630 RNU6-880P-201ENST00000384526 107 ntBASIC1.2□□□□□ -2.22
HOXC6P09630 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
HOXC6P09630 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.2□□□□□ -2.22
HOXC6P09630 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.2□□□□□ -2.22
HOXC6P09630 uc_338.6-201ENST00000613544 171 ntBASIC1.2□□□□□ -2.22
HOXC6P09630 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HOXC6P09630 PDCD5P2-201ENST00000507570 312 ntBASIC1.19□□□□□ -2.22
HOXC6P09630 SNORA31.2-201ENST00000516019 134 ntBASIC1.19□□□□□ -2.22
HOXC6P09630 RNU7-79P-201ENST00000516082 62 ntBASIC1.19□□□□□ -2.22
HOXC6P09630 AC211469.2-201ENST00000605461 205 ntBASIC1.19□□□□□ -2.22
HOXC6P09630 MIR6740-201ENST00000618268 113 ntBASIC1.19□□□□□ -2.22
HOXC6P09630 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
HOXC6P09630 Y_RNA.85-201ENST00000363014 111 ntBASIC1.18□□□□□ -2.22
HOXC6P09630 Y_RNA.281-201ENST00000364774 94 ntBASIC1.18□□□□□ -2.22
HOXC6P09630 RNU6-1107P-201ENST00000364817 104 ntBASIC1.18□□□□□ -2.22
HOXC6P09630 Y_RNA.330-201ENST00000365230 109 ntBASIC1.18□□□□□ -2.22
HOXC6P09630 MIR588-201ENST00000384900 83 ntBASIC1.18□□□□□ -2.22
HOXC6P09630 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.18□□□□□ -2.22
HOXC6P09630 RNU6-1086P-201ENST00000410930 100 ntBASIC1.18□□□□□ -2.22
HOXC6P09630 RNU6-1054P-201ENST00000411293 104 ntBASIC1.18□□□□□ -2.22
HOXC6P09630 MIR4679-2-201ENST00000578358 77 ntBASIC1.18□□□□□ -2.22
HOXC6P09630 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
HOXC6P09630 AL589743.1-201ENST00000551932 2712 ntBASIC1.18□□□□□ -2.22
HOXC6P09630 U8.6-201ENST00000364939 135 ntBASIC1.17□□□□□ -2.22
HOXC6P09630 Y_RNA.299-201ENST00000364973 94 ntBASIC1.17□□□□□ -2.22
HOXC6P09630 SNORA75.2-201ENST00000391138 150 ntBASIC1.17□□□□□ -2.22
HOXC6P09630 SNORA75.3-201ENST00000391231 150 ntBASIC1.17□□□□□ -2.22
HOXC6P09630 snoU13.2-201ENST00000459201 104 ntBASIC1.17□□□□□ -2.22
HOXC6P09630 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.17□□□□□ -2.22
HOXC6P09630 MIR5000-201ENST00000577717 103 ntBASIC1.17□□□□□ -2.22
HOXC6P09630 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.17□□□□□ -2.22
HOXC6P09630 MIR6779-201ENST00000617283 64 ntBASIC1.17□□□□□ -2.22
HOXC6P09630 MIR532-201ENST00000385025 91 ntBASIC1.16□□□□□ -2.22
HOXC6P09630 snoU13.21-201ENST00000459368 105 ntBASIC1.16□□□□□ -2.22
HOXC6P09630 SNORD67.1-201ENST00000516618 108 ntBASIC1.16□□□□□ -2.22
HOXC6P09630 RNU7-35P-201ENST00000517174 62 ntBASIC1.16□□□□□ -2.22
HOXC6P09630 AC068339.1-201ENST00000526965 141 ntBASIC1.16□□□□□ -2.22
HOXC6P09630 uc_338.28-201ENST00000612082 187 ntBASIC1.16□□□□□ -2.22
HOXC6P09630 AC105081.1-201ENST00000617727 106 ntBASIC1.16□□□□□ -2.22
HOXC6P09630 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
HOXC6P09630 SNORD115-19-201ENST00000363098 82 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 SNORD115-18-201ENST00000363293 82 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 RNU4-38P-201ENST00000364472 129 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 SNORD115-17-201ENST00000364612 82 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 RNY1P13-201ENST00000365030 105 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 RNU6-1014P-201ENST00000383940 103 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 RNU6-106P-201ENST00000384405 107 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 RNU6-910P-201ENST00000390844 107 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 RNU6-816P-201ENST00000390914 107 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 RNU6-1307P-201ENST00000391012 103 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 RNU6-1268P-201ENST00000391214 107 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 RNU6-1239P-201ENST00000391310 107 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 RNA5SP237-201ENST00000410414 113 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 SNORA7.5-201ENST00000410672 110 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 RPL39P34-201ENST00000477141 156 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 MIR2115-201ENST00000516657 100 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 AC141846.1-201ENST00000568348 142 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 AP000753.3-201ENST00000604083 169 ntBASIC1.15□□□□□ -2.23
HOXC6P09630 MIR450A1-201ENST00000362262 91 ntBASIC1.14□□□□□ -2.23
HOXC6P09630 MIR605-201ENST00000385078 83 ntBASIC1.14□□□□□ -2.23
HOXC6P09630 SNORD77B-201ENST00000391112 67 ntBASIC1.14□□□□□ -2.23
HOXC6P09630 RNU6-554P-201ENST00000410466 106 ntBASIC1.14□□□□□ -2.23
HOXC6P09630 RPL39P25-201ENST00000449384 154 ntBASIC1.14□□□□□ -2.23
HOXC6P09630 RNU7-62P-201ENST00000458856 62 ntBASIC1.14□□□□□ -2.23
HOXC6P09630 RNU6-412P-201ENST00000516434 106 ntBASIC1.14□□□□□ -2.23
HOXC6P09630 RNU6-521P-201ENST00000516663 105 ntBASIC1.14□□□□□ -2.23
HOXC6P09630 RNU11-2P-201ENST00000516898 142 ntBASIC1.14□□□□□ -2.23
HOXC6P09630 AC023827.1-201ENST00000569247 97 ntBASIC1.14□□□□□ -2.23
HOXC6P09630 MIR5009-201ENST00000578736 100 ntBASIC1.14□□□□□ -2.23
HOXC6P09630 FAM71BP1-201ENST00000604431 523 ntBASIC1.14□□□□□ -2.23
HOXC6P09630 AL662814.1-201ENST00000617364 121 ntBASIC1.14□□□□□ -2.23
HOXC6P09630 SEPT14P17-201ENST00000617978 177 ntBASIC1.14□□□□□ -2.23
HOXC6P09630 AL162726.3-218ENST00000636401 95 ntBASIC1.14□□□□□ -2.23
HOXC6P09630 RNU6-153P-201ENST00000364422 104 ntBASIC1.13□□□□□ -2.23
HOXC6P09630 RNU4-67P-201ENST00000364569 141 ntBASIC1.13□□□□□ -2.23
HOXC6P09630 SNORA25.8-201ENST00000364831 128 ntBASIC1.13□□□□□ -2.23
HOXC6P09630 SNORA2B-201ENST00000384583 137 ntBASIC1.13□□□□□ -2.23
HOXC6P09630 RNU6-613P-201ENST00000410412 108 ntBASIC1.13□□□□□ -2.23
HOXC6P09630 AL353813.1-201ENST00000440700 253 ntBASIC1.13□□□□□ -2.23
HOXC6P09630 RNA5SP436-201ENST00000516020 115 ntBASIC1.13□□□□□ -2.23
HOXC6P09630 CYP3A137P-201ENST00000562436 69 ntBASIC1.13□□□□□ -2.23
HOXC6P09630 MIR3973-201ENST00000579824 107 ntBASIC1.13□□□□□ -2.23
HOXC6P09630 MIR4264-201ENST00000583520 66 ntBASIC1.13□□□□□ -2.23
HOXC6P09630 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
HOXC6P09630 MIR30D-201ENST00000362283 70 ntBASIC1.12□□□□□ -2.23
HOXC6P09630 RNA5SP327-201ENST00000362494 101 ntBASIC1.12□□□□□ -2.23
HOXC6P09630 RNU6-363P-201ENST00000362895 105 ntBASIC1.12□□□□□ -2.23
HOXC6P09630 Y_RNA.155-201ENST00000363632 101 ntBASIC1.12□□□□□ -2.23
HOXC6P09630 RNU6-755P-201ENST00000364400 103 ntBASIC1.12□□□□□ -2.23
HOXC6P09630 MIR206-201ENST00000384872 86 ntBASIC1.12□□□□□ -2.23
HOXC6P09630 MIR563-201ENST00000385080 79 ntBASIC1.12□□□□□ -2.23
HOXC6P09630 RNU6-679P-201ENST00000391003 106 ntBASIC1.12□□□□□ -2.23
HOXC6P09630 RNU6-1165P-201ENST00000410119 107 ntBASIC1.12□□□□□ -2.23
HOXC6P09630 SNORA19.1-201ENST00000410656 129 ntBASIC1.12□□□□□ -2.23
HOXC6P09630 AC015818.7-201ENST00000428754 109 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 256 ms