Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
CD48P09326 Y_RNA.198-201ENST00000364013 98 ntBASIC0.92□□□□□ -2.26
CD48P09326 MIR588-201ENST00000384900 83 ntBASIC0.92□□□□□ -2.26
CD48P09326 MIR618-201ENST00000385287 98 ntBASIC0.92□□□□□ -2.26
CD48P09326 RNU6-1086P-201ENST00000410930 100 ntBASIC0.92□□□□□ -2.26
CD48P09326 MIR4698-201ENST00000577795 80 ntBASIC0.92□□□□□ -2.26
CD48P09326 MIR3973-201ENST00000579824 107 ntBASIC0.92□□□□□ -2.26
CD48P09326 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.92□□□□□ -2.26
CD48P09326 AC012676.2-201ENST00000619258 186 ntBASIC0.92□□□□□ -2.26
CD48P09326 AC008163.1-202ENST00000636004 2889 ntBASIC0.92□□□□□ -2.26
CD48P09326 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CD48P09326 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CD48P09326 Y_RNA.549-201ENST00000384657 102 ntBASIC0.91□□□□□ -2.26
CD48P09326 RNU6-205P-201ENST00000390858 107 ntBASIC0.91□□□□□ -2.26
CD48P09326 RNU6-1307P-201ENST00000391012 103 ntBASIC0.91□□□□□ -2.26
CD48P09326 AC063976.4-201ENST00000421971 163 ntBASIC0.91□□□□□ -2.26
CD48P09326 MIR18B-201ENST00000454574 71 ntBASIC0.91□□□□□ -2.26
CD48P09326 RNU7-62P-201ENST00000458856 62 ntBASIC0.91□□□□□ -2.26
CD48P09326 COX6CP6-201ENST00000490840 228 ntBASIC0.91□□□□□ -2.26
CD48P09326 RNA5SP33-201ENST00000516687 98 ntBASIC0.91□□□□□ -2.26
CD48P09326 RNU7-35P-201ENST00000517174 62 ntBASIC0.91□□□□□ -2.26
CD48P09326 AC019288.1-201ENST00000557918 224 ntBASIC0.91□□□□□ -2.26
CD48P09326 AC025166.1-201ENST00000612411 163 ntBASIC0.91□□□□□ -2.26
CD48P09326 MIR6129-201ENST00000616087 109 ntBASIC0.91□□□□□ -2.26
CD48P09326 MIR30D-201ENST00000362283 70 ntBASIC0.9□□□□□ -2.27
CD48P09326 Y_RNA.528-201ENST00000384575 108 ntBASIC0.9□□□□□ -2.27
CD48P09326 SNORA2B-201ENST00000384583 137 ntBASIC0.9□□□□□ -2.27
CD48P09326 MIR532-201ENST00000385025 91 ntBASIC0.9□□□□□ -2.27
CD48P09326 RNU6-1165P-201ENST00000410119 107 ntBASIC0.9□□□□□ -2.27
CD48P09326 RNU4-69P-201ENST00000410677 143 ntBASIC0.9□□□□□ -2.27
CD48P09326 RNU6-62P-201ENST00000516526 102 ntBASIC0.9□□□□□ -2.27
CD48P09326 RNA5SP404-201ENST00000517118 132 ntBASIC0.9□□□□□ -2.27
CD48P09326 RN7SL793P-201ENST00000583259 296 ntBASIC0.9□□□□□ -2.27
CD48P09326 MIR548AE2-201ENST00000583456 67 ntBASIC0.9□□□□□ -2.27
CD48P09326 FAM71BP1-201ENST00000604431 523 ntBASIC0.9□□□□□ -2.27
CD48P09326 AL662814.1-201ENST00000617364 121 ntBASIC0.9□□□□□ -2.27
CD48P09326 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.9□□□□□ -2.27
CD48P09326 Y_RNA.35-201ENST00000362601 101 ntBASIC0.89□□□□□ -2.27
CD48P09326 SNORA25.8-201ENST00000364831 128 ntBASIC0.89□□□□□ -2.27
CD48P09326 RNU6-215P-201ENST00000365169 102 ntBASIC0.89□□□□□ -2.27
CD48P09326 Y_RNA.344-201ENST00000365381 112 ntBASIC0.89□□□□□ -2.27
CD48P09326 Y_RNA.346-201ENST00000365385 112 ntBASIC0.89□□□□□ -2.27
CD48P09326 SNORA18-201ENST00000384416 132 ntBASIC0.89□□□□□ -2.27
CD48P09326 MT-TF-201ENST00000387314 71 ntBASIC0.89□□□□□ -2.27
CD48P09326 AL353813.1-201ENST00000440700 253 ntBASIC0.89□□□□□ -2.27
CD48P09326 snoU13.21-201ENST00000459368 105 ntBASIC0.89□□□□□ -2.27
CD48P09326 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
CD48P09326 AL391516.1-201ENST00000554380 2449 ntBASIC0.88□□□□□ -2.27
CD48P09326 MIR373-201ENST00000362273 69 ntBASIC0.88□□□□□ -2.27
CD48P09326 RNU6-1144P-201ENST00000384247 104 ntBASIC0.88□□□□□ -2.27
CD48P09326 SNORD20-201ENST00000384550 80 ntBASIC0.88□□□□□ -2.27
CD48P09326 RNU6-476P-201ENST00000384726 107 ntBASIC0.88□□□□□ -2.27
CD48P09326 MIR200A-201ENST00000384875 90 ntBASIC0.88□□□□□ -2.27
CD48P09326 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.88□□□□□ -2.27
CD48P09326 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.88□□□□□ -2.27
CD48P09326 AC096949.1-201ENST00000412047 152 ntBASIC0.88□□□□□ -2.27
CD48P09326 RNU7-79P-201ENST00000516082 62 ntBASIC0.88□□□□□ -2.27
CD48P09326 AC141846.1-201ENST00000568348 142 ntBASIC0.88□□□□□ -2.27
CD48P09326 AC023827.1-201ENST00000569247 97 ntBASIC0.88□□□□□ -2.27
CD48P09326 AL359881.1-201ENST00000602916 267 ntBASIC0.88□□□□□ -2.27
CD48P09326 Y_RNA.773-201ENST00000607168 90 ntBASIC0.88□□□□□ -2.27
CD48P09326 AC087741.2-201ENST00000619415 172 ntBASIC0.88□□□□□ -2.27
CD48P09326 Y_RNA.273-201ENST00000364703 102 ntBASIC0.87□□□□□ -2.27
CD48P09326 RNU6-1081P-201ENST00000384537 107 ntBASIC0.87□□□□□ -2.27
CD48P09326 MIR548A1-201ENST00000385041 97 ntBASIC0.87□□□□□ -2.27
CD48P09326 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.87□□□□□ -2.27
CD48P09326 RNA5SP237-201ENST00000410414 113 ntBASIC0.87□□□□□ -2.27
CD48P09326 RNU6-589P-201ENST00000516485 107 ntBASIC0.87□□□□□ -2.27
CD48P09326 MTND5P34-201ENST00000568888 325 ntBASIC0.87□□□□□ -2.27
CD48P09326 MIR1255B1-201ENST00000636325 63 ntBASIC0.87□□□□□ -2.27
CD48P09326 U6.95-201ENST00000636931 70 ntBASIC0.87□□□□□ -2.27
CD48P09326 Y_RNA.213-201ENST00000364178 111 ntBASIC0.86□□□□□ -2.27
CD48P09326 RNY1P13-201ENST00000365030 105 ntBASIC0.86□□□□□ -2.27
CD48P09326 RNU6-934P-201ENST00000365154 107 ntBASIC0.86□□□□□ -2.27
CD48P09326 RNU6-949P-201ENST00000384040 107 ntBASIC0.86□□□□□ -2.27
CD48P09326 SNORA32-201ENST00000384072 121 ntBASIC0.86□□□□□ -2.27
CD48P09326 RNY1P4-201ENST00000384595 115 ntBASIC0.86□□□□□ -2.27
CD48P09326 MIR216A-201ENST00000385063 110 ntBASIC0.86□□□□□ -2.27
CD48P09326 MIR759-201ENST00000390224 91 ntBASIC0.86□□□□□ -2.27
CD48P09326 RNY4P18-201ENST00000391107 89 ntBASIC0.86□□□□□ -2.27
CD48P09326 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.86□□□□□ -2.27
CD48P09326 RNU6-1064P-201ENST00000410626 104 ntBASIC0.86□□□□□ -2.27
CD48P09326 Y_RNA.629-201ENST00000411368 105 ntBASIC0.86□□□□□ -2.27
CD48P09326 RPS26P5-201ENST00000418544 335 ntBASIC0.86□□□□□ -2.27
CD48P09326 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
CD48P09326 MIR5000-201ENST00000577717 103 ntBASIC0.86□□□□□ -2.27
CD48P09326 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.86□□□□□ -2.27
CD48P09326 MIR3163-201ENST00000581592 73 ntBASIC0.86□□□□□ -2.27
CD48P09326 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
CD48P09326 RNU6-369P-201ENST00000362515 102 ntBASIC0.85□□□□□ -2.27
CD48P09326 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
CD48P09326 Y_RNA.362-201ENST00000365518 110 ntBASIC0.85□□□□□ -2.27
CD48P09326 RNU6-1237P-201ENST00000384777 107 ntBASIC0.85□□□□□ -2.27
CD48P09326 AC015818.7-201ENST00000428754 109 ntBASIC0.85□□□□□ -2.27
CD48P09326 FABP5P4-201ENST00000437203 171 ntBASIC0.85□□□□□ -2.27
CD48P09326 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.85□□□□□ -2.27
CD48P09326 AC087499.7-201ENST00000441958 109 ntBASIC0.85□□□□□ -2.27
CD48P09326 Y_RNA.649-201ENST00000459077 103 ntBASIC0.85□□□□□ -2.27
CD48P09326 AL670379.3-201ENST00000605040 251 ntBASIC0.85□□□□□ -2.27
CD48P09326 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 228.3 ms