Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 RNY1P10-201ENST00000363268 113 ntBASIC1.88□□□□□ -2.11
SYPP08247 Y_RNA.190-201ENST00000363964 101 ntBASIC1.88□□□□□ -2.11
SYPP08247 RNU6-396P-201ENST00000365369 105 ntBASIC1.88□□□□□ -2.11
SYPP08247 RNU6-949P-201ENST00000384040 107 ntBASIC1.88□□□□□ -2.11
SYPP08247 MIR588-201ENST00000384900 83 ntBASIC1.88□□□□□ -2.11
SYPP08247 MIR563-201ENST00000385080 79 ntBASIC1.88□□□□□ -2.11
SYPP08247 U8.15-201ENST00000390947 134 ntBASIC1.88□□□□□ -2.11
SYPP08247 AC005908.1-201ENST00000468701 347 ntBASIC1.88□□□□□ -2.11
SYPP08247 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
SYPP08247 MIR494-201ENST00000349529 81 ntBASIC1.87□□□□□ -2.11
SYPP08247 MIR548G-201ENST00000408442 89 ntBASIC1.87□□□□□ -2.11
SYPP08247 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.87□□□□□ -2.11
SYPP08247 AC027119.1-201ENST00000440877 241 ntBASIC1.87□□□□□ -2.11
SYPP08247 RPL39P39-201ENST00000455840 151 ntBASIC1.87□□□□□ -2.11
SYPP08247 RNU6-947P-201ENST00000516264 106 ntBASIC1.87□□□□□ -2.11
SYPP08247 MIR5089-201ENST00000580047 84 ntBASIC1.87□□□□□ -2.11
SYPP08247 MIR4264-201ENST00000583520 66 ntBASIC1.87□□□□□ -2.11
SYPP08247 RNU6-86P-201ENST00000606534 107 ntBASIC1.87□□□□□ -2.11
SYPP08247 AL627230.6-201ENST00000611129 280 ntBASIC1.87□□□□□ -2.11
SYPP08247 MIR6740-201ENST00000618268 113 ntBASIC1.87□□□□□ -2.11
SYPP08247 AP001362.1-201ENST00000625165 124 ntBASIC1.87□□□□□ -2.11
SYPP08247 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYPP08247 RNA5SP173-201ENST00000364857 136 ntBASIC1.86□□□□□ -2.11
SYPP08247 RNU6-1152P-201ENST00000384576 107 ntBASIC1.86□□□□□ -2.11
SYPP08247 MT-TN-201ENST00000387400 73 ntBASIC1.86□□□□□ -2.11
SYPP08247 snoU13.9-201ENST00000458927 103 ntBASIC1.86□□□□□ -2.11
SYPP08247 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
SYPP08247 AL133373.1-201ENST00000497098 94 ntBASIC1.86□□□□□ -2.11
SYPP08247 MIR2115-201ENST00000516657 100 ntBASIC1.86□□□□□ -2.11
SYPP08247 AL096840.1-201ENST00000603287 93 ntBASIC1.86□□□□□ -2.11
SYPP08247 AC103810.7-201ENST00000607821 91 ntBASIC1.86□□□□□ -2.11
SYPP08247 AC084768.2-201ENST00000622736 221 ntBASIC1.86□□□□□ -2.11
SYPP08247 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
SYPP08247 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SYPP08247 RNU6-1244P-201ENST00000363614 108 ntBASIC1.85□□□□□ -2.11
SYPP08247 SNORD1A-201ENST00000364968 72 ntBASIC1.85□□□□□ -2.11
SYPP08247 SNORD58A-201ENST00000383875 65 ntBASIC1.85□□□□□ -2.11
SYPP08247 MIR30A-201ENST00000385092 71 ntBASIC1.85□□□□□ -2.11
SYPP08247 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SYPP08247 SNORA67.5-201ENST00000391036 107 ntBASIC1.85□□□□□ -2.11
SYPP08247 SNORA17.3-201ENST00000391159 129 ntBASIC1.85□□□□□ -2.11
SYPP08247 MIR1185-1-201ENST00000408598 86 ntBASIC1.85□□□□□ -2.11
SYPP08247 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.85□□□□□ -2.11
SYPP08247 SNORD13-201ENST00000459299 104 ntBASIC1.85□□□□□ -2.11
SYPP08247 RNU6-90P-201ENST00000606352 106 ntBASIC1.85□□□□□ -2.11
SYPP08247 MIR6516-201ENST00000630554 81 ntBASIC1.85□□□□□ -2.11
SYPP08247 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
SYPP08247 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SYPP08247 SNORD116-10-201ENST00000363791 102 ntBASIC1.84□□□□□ -2.11
SYPP08247 SNORD38.2-201ENST00000384470 69 ntBASIC1.84□□□□□ -2.11
SYPP08247 Y_RNA.567-201ENST00000384736 106 ntBASIC1.84□□□□□ -2.11
SYPP08247 RNU6-592P-201ENST00000411333 103 ntBASIC1.84□□□□□ -2.11
SYPP08247 SPINT5P-201ENST00000448174 155 ntBASIC1.84□□□□□ -2.11
SYPP08247 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.84□□□□□ -2.11
SYPP08247 AC133485.1-201ENST00000567176 124 ntBASIC1.84□□□□□ -2.11
SYPP08247 SNRPGP19-201ENST00000603826 189 ntBASIC1.84□□□□□ -2.11
SYPP08247 AP000753.3-201ENST00000604083 169 ntBASIC1.84□□□□□ -2.11
SYPP08247 uc_338.20-201ENST00000621563 178 ntBASIC1.84□□□□□ -2.11
SYPP08247 MIR30D-201ENST00000362283 70 ntBASIC1.83□□□□□ -2.12
SYPP08247 Y_RNA.173-201ENST00000363776 113 ntBASIC1.83□□□□□ -2.12
SYPP08247 RNY1P2-201ENST00000364820 117 ntBASIC1.83□□□□□ -2.12
SYPP08247 RNU6-675P-201ENST00000384236 104 ntBASIC1.83□□□□□ -2.12
SYPP08247 RNU6-205P-201ENST00000390858 107 ntBASIC1.83□□□□□ -2.12
SYPP08247 RNU6-321P-201ENST00000410912 106 ntBASIC1.83□□□□□ -2.12
SYPP08247 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.83□□□□□ -2.12
SYPP08247 RNU11-2P-201ENST00000516898 142 ntBASIC1.83□□□□□ -2.12
SYPP08247 SNORA44.1-201ENST00000517031 108 ntBASIC1.83□□□□□ -2.12
SYPP08247 MIR502-201ENST00000606349 86 ntBASIC1.83□□□□□ -2.12
SYPP08247 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SYPP08247 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.82□□□□□ -2.12
SYPP08247 RNA5SP264-201ENST00000363115 107 ntBASIC1.82□□□□□ -2.12
SYPP08247 RNU6-1165P-201ENST00000410119 107 ntBASIC1.82□□□□□ -2.12
SYPP08247 AC003989.2-201ENST00000440224 169 ntBASIC1.82□□□□□ -2.12
SYPP08247 AC079140.2-201ENST00000506193 142 ntBASIC1.82□□□□□ -2.12
SYPP08247 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.82□□□□□ -2.12
SYPP08247 AC019176.1-201ENST00000518519 225 ntBASIC1.82□□□□□ -2.12
SYPP08247 AC024614.2-201ENST00000577584 372 ntBASIC1.82□□□□□ -2.12
SYPP08247 SNORA4-201ENST00000584302 138 ntBASIC1.82□□□□□ -2.12
SYPP08247 AC012676.2-201ENST00000619258 186 ntBASIC1.82□□□□□ -2.12
SYPP08247 HSBP1P2-201ENST00000299671 229 ntBASIC1.81□□□□□ -2.12
SYPP08247 MIR377-201ENST00000362145 69 ntBASIC1.81□□□□□ -2.12
SYPP08247 MIR103A2-201ENST00000362154 78 ntBASIC1.81□□□□□ -2.12
SYPP08247 SNORD33-201ENST00000362761 85 ntBASIC1.81□□□□□ -2.12
SYPP08247 Y_RNA.168-201ENST00000363740 102 ntBASIC1.81□□□□□ -2.12
SYPP08247 RNU6-573P-201ENST00000383938 106 ntBASIC1.81□□□□□ -2.12
SYPP08247 SNORD116-22-201ENST00000384430 92 ntBASIC1.81□□□□□ -2.12
SYPP08247 MIR676-201ENST00000390702 67 ntBASIC1.81□□□□□ -2.12
SYPP08247 RNU6-613P-201ENST00000410412 108 ntBASIC1.81□□□□□ -2.12
SYPP08247 RNU7-62P-201ENST00000458856 62 ntBASIC1.81□□□□□ -2.12
SYPP08247 TRMT112P2-201ENST00000512910 132 ntBASIC1.81□□□□□ -2.12
SYPP08247 AL359821.1-201ENST00000605519 182 ntBASIC1.81□□□□□ -2.12
SYPP08247 RNY1P1-201ENST00000364372 112 ntBASIC1.8□□□□□ -2.12
SYPP08247 RNU6-402P-201ENST00000410678 103 ntBASIC1.8□□□□□ -2.12
SYPP08247 RNU1-98P-201ENST00000458992 160 ntBASIC1.8□□□□□ -2.12
SYPP08247 RPL30P7-201ENST00000479312 323 ntBASIC1.8□□□□□ -2.12
SYPP08247 RPS29P11-201ENST00000496507 171 ntBASIC1.8□□□□□ -2.12
SYPP08247 MTND5P40-201ENST00000559945 246 ntBASIC1.8□□□□□ -2.12
SYPP08247 AC138749.4-201ENST00000563970 127 ntBASIC1.8□□□□□ -2.12
SYPP08247 MIR3664-201ENST00000579074 99 ntBASIC1.8□□□□□ -2.12
SYPP08247 uc_338.6-201ENST00000613544 171 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms