Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 MIR3134-201ENST00000579433 74 ntBASIC2.11□□□□□ -2.07
KRT1P04264 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.11□□□□□ -2.07
KRT1P04264 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KRT1P04264 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KRT1P04264 RNY1P2-201ENST00000364820 117 ntBASIC2.1□□□□□ -2.07
KRT1P04264 Y_RNA.340-201ENST00000365330 92 ntBASIC2.1□□□□□ -2.07
KRT1P04264 SNORD38B-201ENST00000384690 67 ntBASIC2.1□□□□□ -2.07
KRT1P04264 RNU6-1237P-201ENST00000384777 107 ntBASIC2.1□□□□□ -2.07
KRT1P04264 RNA5SP237-201ENST00000410414 113 ntBASIC2.1□□□□□ -2.07
KRT1P04264 RNA5SP489-201ENST00000410986 109 ntBASIC2.1□□□□□ -2.07
KRT1P04264 RNA5SP247-201ENST00000411181 105 ntBASIC2.1□□□□□ -2.07
KRT1P04264 AL603825.1-201ENST00000438481 80 ntBASIC2.1□□□□□ -2.07
KRT1P04264 SCARNA18B-201ENST00000458806 135 ntBASIC2.1□□□□□ -2.07
KRT1P04264 MIR4709-201ENST00000577272 72 ntBASIC2.1□□□□□ -2.07
KRT1P04264 MIR4796-201ENST00000580742 81 ntBASIC2.1□□□□□ -2.07
KRT1P04264 AC021506.2-201ENST00000612354 169 ntBASIC2.1□□□□□ -2.07
KRT1P04264 AC008133.2-201ENST00000624540 351 ntBASIC2.1□□□□□ -2.07
KRT1P04264 SNORD38B-202ENST00000625943 69 ntBASIC2.1□□□□□ -2.07
KRT1P04264 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.1□□□□□ -2.07
KRT1P04264 SNORA67.3-201ENST00000384366 140 ntBASIC2.09□□□□□ -2.07
KRT1P04264 HMGN2P3-201ENST00000433603 273 ntBASIC2.09□□□□□ -2.07
KRT1P04264 HMGN2P5-201ENST00000436882 273 ntBASIC2.09□□□□□ -2.07
KRT1P04264 FGF7P7-201ENST00000514120 227 ntBASIC2.09□□□□□ -2.07
KRT1P04264 MIR1273D-201ENST00000577266 86 ntBASIC2.09□□□□□ -2.07
KRT1P04264 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRT1P04264 snoU13.23-201ENST00000458863 104 ntBASIC2.08□□□□□ -2.08
KRT1P04264 Y_RNA.648-201ENST00000459455 110 ntBASIC2.08□□□□□ -2.08
KRT1P04264 RNU6-807P-201ENST00000516805 107 ntBASIC2.08□□□□□ -2.08
KRT1P04264 RNA5SP481-201ENST00000516814 122 ntBASIC2.08□□□□□ -2.08
KRT1P04264 AC141846.1-201ENST00000568348 142 ntBASIC2.08□□□□□ -2.08
KRT1P04264 MIR4764-201ENST00000580680 88 ntBASIC2.08□□□□□ -2.08
KRT1P04264 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.08□□□□□ -2.08
KRT1P04264 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.08□□□□□ -2.08
KRT1P04264 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KRT1P04264 RNU6-161P-201ENST00000363051 106 ntBASIC2.07□□□□□ -2.08
KRT1P04264 U8.2-201ENST00000363156 134 ntBASIC2.07□□□□□ -2.08
KRT1P04264 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
KRT1P04264 RNU7-85P-201ENST00000458851 63 ntBASIC2.07□□□□□ -2.08
KRT1P04264 RNU6-448P-201ENST00000517052 107 ntBASIC2.07□□□□□ -2.08
KRT1P04264 RNU6-1015P-201ENST00000517121 99 ntBASIC2.07□□□□□ -2.08
KRT1P04264 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
KRT1P04264 SNRPGP19-201ENST00000603826 189 ntBASIC2.07□□□□□ -2.08
KRT1P04264 MIR1297-201ENST00000637311 77 ntBASIC2.07□□□□□ -2.08
KRT1P04264 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.07□□□□□ -2.08
KRT1P04264 MIR424-201ENST00000362227 98 ntBASIC2.06□□□□□ -2.08
KRT1P04264 MIR597-201ENST00000384968 97 ntBASIC2.06□□□□□ -2.08
KRT1P04264 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
KRT1P04264 MIR1283-2-201ENST00000408621 87 ntBASIC2.06□□□□□ -2.08
KRT1P04264 AC027119.1-201ENST00000440877 241 ntBASIC2.06□□□□□ -2.08
KRT1P04264 SNRPGP12-201ENST00000449481 213 ntBASIC2.06□□□□□ -2.08
KRT1P04264 snoU13.27-201ENST00000459278 104 ntBASIC2.06□□□□□ -2.08
KRT1P04264 Y_RNA.681-201ENST00000516445 113 ntBASIC2.06□□□□□ -2.08
KRT1P04264 AC090897.1-201ENST00000580909 226 ntBASIC2.06□□□□□ -2.08
KRT1P04264 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.05□□□□□ -2.08
KRT1P04264 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
KRT1P04264 Y_RNA.264-201ENST00000364665 102 ntBASIC2.05□□□□□ -2.08
KRT1P04264 RNU6-949P-201ENST00000384040 107 ntBASIC2.05□□□□□ -2.08
KRT1P04264 RNU6-811P-201ENST00000384069 107 ntBASIC2.05□□□□□ -2.08
KRT1P04264 MIR520C-201ENST00000385005 87 ntBASIC2.05□□□□□ -2.08
KRT1P04264 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.05□□□□□ -2.08
KRT1P04264 SNORA3.2-201ENST00000408221 125 ntBASIC2.05□□□□□ -2.08
KRT1P04264 RN7SKP223-201ENST00000410582 62 ntBASIC2.05□□□□□ -2.08
KRT1P04264 RNU4-83P-201ENST00000410863 133 ntBASIC2.05□□□□□ -2.08
KRT1P04264 RNU6-70P-201ENST00000516438 60 ntBASIC2.05□□□□□ -2.08
KRT1P04264 RNU6-850P-201ENST00000516934 103 ntBASIC2.05□□□□□ -2.08
KRT1P04264 RNA5SP364-201ENST00000516938 78 ntBASIC2.05□□□□□ -2.08
KRT1P04264 AC015712.3-201ENST00000559380 164 ntBASIC2.05□□□□□ -2.08
KRT1P04264 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.05□□□□□ -2.08
KRT1P04264 MIR4500-201ENST00000579472 76 ntBASIC2.05□□□□□ -2.08
KRT1P04264 MIR548AO-201ENST00000579992 96 ntBASIC2.05□□□□□ -2.08
KRT1P04264 MIR4536-1-201ENST00000583537 88 ntBASIC2.05□□□□□ -2.08
KRT1P04264 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
KRT1P04264 AL662814.1-201ENST00000617364 121 ntBASIC2.05□□□□□ -2.08
KRT1P04264 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
KRT1P04264 RNU6-571P-201ENST00000384128 107 ntBASIC2.04□□□□□ -2.08
KRT1P04264 SNORA72.6-201ENST00000384520 129 ntBASIC2.04□□□□□ -2.08
KRT1P04264 RNA5SP425-201ENST00000410336 112 ntBASIC2.04□□□□□ -2.08
KRT1P04264 WWP1P1-201ENST00000466609 2769 ntBASIC2.04□□□□□ -2.08
KRT1P04264 AC099513.1-201ENST00000490423 301 ntBASIC2.04□□□□□ -2.08
KRT1P04264 RNU6-1108P-201ENST00000516308 104 ntBASIC2.04□□□□□ -2.08
KRT1P04264 RNA5SP437-201ENST00000517249 129 ntBASIC2.04□□□□□ -2.08
KRT1P04264 MIR4713-201ENST00000582691 75 ntBASIC2.04□□□□□ -2.08
KRT1P04264 MIR3935-201ENST00000583472 104 ntBASIC2.04□□□□□ -2.08
KRT1P04264 AL357312.1-201ENST00000603879 298 ntBASIC2.04□□□□□ -2.08
KRT1P04264 MIR7111-201ENST00000619751 72 ntBASIC2.04□□□□□ -2.08
KRT1P04264 MIR219B-201ENST00000637023 88 ntBASIC2.04□□□□□ -2.08
KRT1P04264 SNORA48.1-201ENST00000390879 135 ntBASIC2.03□□□□□ -2.08
KRT1P04264 SNORD77.2-201ENST00000391045 68 ntBASIC2.03□□□□□ -2.08
KRT1P04264 RNU6-482P-201ENST00000391068 107 ntBASIC2.03□□□□□ -2.08
KRT1P04264 RNU2-59P-201ENST00000410482 191 ntBASIC2.03□□□□□ -2.08
KRT1P04264 RNU6-634P-201ENST00000459134 106 ntBASIC2.03□□□□□ -2.08
KRT1P04264 RNVU1-2-201ENST00000516326 135 ntBASIC2.03□□□□□ -2.08
KRT1P04264 SUB1P4-201ENST00000566062 339 ntBASIC2.03□□□□□ -2.08
KRT1P04264 DEFB122-202ENST00000569013 197 ntBASIC2.03□□□□□ -2.08
KRT1P04264 MIR4251-201ENST00000635819 61 ntBASIC2.03□□□□□ -2.08
KRT1P04264 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRT1P04264 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.02□□□□□ -2.09
KRT1P04264 RNU6-112P-201ENST00000363599 104 ntBASIC2.02□□□□□ -2.09
KRT1P04264 RNU6-649P-201ENST00000384463 107 ntBASIC2.02□□□□□ -2.09
KRT1P04264 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms