Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.77□□□□□ -2.69
APOBP04114 RNU6-281P-201ENST00000384212 103 ntBASIC-1.77□□□□□ -2.69
APOBP04114 RNU6-159P-201ENST00000391080 106 ntBASIC-1.77□□□□□ -2.69
APOBP04114 AL603910.2-201ENST00000407268 136 ntBASIC-1.77□□□□□ -2.69
APOBP04114 SNORD11-201ENST00000459124 84 ntBASIC-1.77□□□□□ -2.69
APOBP04114 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.77□□□□□ -2.69
APOBP04114 AC022140.2-201ENST00000623500 188 ntBASIC-1.77□□□□□ -2.69
APOBP04114 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.78□□□□□ -2.69
APOBP04114 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.78□□□□□ -2.69
APOBP04114 RNU7-115P-201ENST00000516433 55 ntBASIC-1.78□□□□□ -2.69
APOBP04114 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.78□□□□□ -2.69
APOBP04114 MTND3P16-201ENST00000452205 344 ntBASIC-1.78□□□□□ -2.69
APOBP04114 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.78□□□□□ -2.69
APOBP04114 FGF7P2-201ENST00000332473 296 ntBASIC-1.78□□□□□ -2.69
APOBP04114 SNORD115-37-201ENST00000363768 82 ntBASIC-1.78□□□□□ -2.69
APOBP04114 RNU6-298P-201ENST00000390888 96 ntBASIC-1.78□□□□□ -2.69
APOBP04114 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.78□□□□□ -2.69
APOBP04114 SNORD67.1-201ENST00000516618 108 ntBASIC-1.78□□□□□ -2.69
APOBP04114 SCOCP1-201ENST00000554676 349 ntBASIC-1.78□□□□□ -2.69
APOBP04114 AL731768.1-201ENST00000603124 139 ntBASIC-1.78□□□□□ -2.69
APOBP04114 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.78□□□□□ -2.69
APOBP04114 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.78□□□□□ -2.69
APOBP04114 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.78□□□□□ -2.69
APOBP04114 RNU6-828P-201ENST00000364876 107 ntBASIC-1.79□□□□□ -2.7
APOBP04114 MIR4789-201ENST00000577469 82 ntBASIC-1.79□□□□□ -2.7
APOBP04114 MIR4775-201ENST00000581168 75 ntBASIC-1.79□□□□□ -2.7
APOBP04114 SNORD72-201ENST00000390994 80 ntBASIC-1.79□□□□□ -2.7
APOBP04114 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.79□□□□□ -2.7
APOBP04114 AC091932.4-201ENST00000623386 200 ntBASIC-1.79□□□□□ -2.7
APOBP04114 MIR1278-201ENST00000408753 81 ntBASIC-1.79□□□□□ -2.7
APOBP04114 RNU6-126P-201ENST00000516685 103 ntBASIC-1.79□□□□□ -2.7
APOBP04114 AC245297.2-201ENST00000610119 565 ntBASIC-1.79□□□□□ -2.7
APOBP04114 RNU6-834P-201ENST00000362367 110 ntBASIC-1.79□□□□□ -2.7
APOBP04114 RNU6-235P-201ENST00000362644 107 ntBASIC-1.79□□□□□ -2.7
APOBP04114 RNU6-20P-201ENST00000384106 107 ntBASIC-1.79□□□□□ -2.7
APOBP04114 RNU6-214P-201ENST00000384130 107 ntBASIC-1.79□□□□□ -2.7
APOBP04114 SNORD38.2-201ENST00000384470 69 ntBASIC-1.79□□□□□ -2.7
APOBP04114 MIR1255B2-201ENST00000408618 67 ntBASIC-1.79□□□□□ -2.7
APOBP04114 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.79□□□□□ -2.7
APOBP04114 AP001362.1-201ENST00000625165 124 ntBASIC-1.79□□□□□ -2.7
APOBP04114 RNU7-70P-201ENST00000516941 66 ntBASIC-1.8□□□□□ -2.7
APOBP04114 RNU6-181P-201ENST00000363225 107 ntBASIC-1.8□□□□□ -2.7
APOBP04114 RNU6-757P-201ENST00000410334 100 ntBASIC-1.8□□□□□ -2.7
APOBP04114 AC024909.2-201ENST00000553035 286 ntBASIC-1.8□□□□□ -2.7
APOBP04114 AC084781.2-201ENST00000615568 161 ntBASIC-1.8□□□□□ -2.7
APOBP04114 RNY1P16-201ENST00000363063 111 ntBASIC-1.8□□□□□ -2.7
APOBP04114 RNU7-24P-201ENST00000458867 62 ntBASIC-1.8□□□□□ -2.7
APOBP04114 MRPS36P3-201ENST00000519284 130 ntBASIC-1.8□□□□□ -2.7
APOBP04114 AC021613.1-201ENST00000623880 111 ntBASIC-1.8□□□□□ -2.7
APOBP04114 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.81□□□□□ -2.7
APOBP04114 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.81□□□□□ -2.7
APOBP04114 MIR548Q-201ENST00000408404 100 ntBASIC-1.81□□□□□ -2.7
APOBP04114 RNU2-38P-201ENST00000410856 79 ntBASIC-1.81□□□□□ -2.7
APOBP04114 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.81□□□□□ -2.7
APOBP04114 RNU7-167P-201ENST00000459160 62 ntBASIC-1.81□□□□□ -2.7
APOBP04114 AC087741.2-201ENST00000619415 172 ntBASIC-1.81□□□□□ -2.7
APOBP04114 AL590004.1-201ENST00000405321 300 ntBASIC-1.81□□□□□ -2.7
APOBP04114 MTCO2P21-201ENST00000419780 677 ntBASIC-1.81□□□□□ -2.7
APOBP04114 MTND2P22-201ENST00000444325 1033 ntBASIC-1.81□□□□□ -2.7
APOBP04114 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.81□□□□□ -2.7
APOBP04114 AC022878.1-201ENST00000530684 149 ntBASIC-1.81□□□□□ -2.7
APOBP04114 MIR4790-201ENST00000577799 79 ntBASIC-1.81□□□□□ -2.7
APOBP04114 RNU6-874P-201ENST00000362390 105 ntBASIC-1.81□□□□□ -2.7
APOBP04114 RNU6-938P-201ENST00000411285 103 ntBASIC-1.81□□□□□ -2.7
APOBP04114 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.81□□□□□ -2.7
APOBP04114 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.81□□□□□ -2.7
APOBP04114 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.81□□□□□ -2.7
APOBP04114 U6.97-201ENST00000636904 101 ntBASIC-1.81□□□□□ -2.7
APOBP04114 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.82□□□□□ -2.7
APOBP04114 SNORA32-201ENST00000384072 121 ntBASIC-1.82□□□□□ -2.7
APOBP04114 AC112204.1-201ENST00000502591 103 ntBASIC-1.82□□□□□ -2.7
APOBP04114 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.82□□□□□ -2.7
APOBP04114 AC011476.5-201ENST00000615594 130 ntBASIC-1.82□□□□□ -2.7
APOBP04114 AC104010.1-201ENST00000616889 150 ntBASIC-1.82□□□□□ -2.7
APOBP04114 RNU6-517P-201ENST00000384362 110 ntBASIC-1.82□□□□□ -2.7
APOBP04114 RNU6-903P-201ENST00000391270 109 ntBASIC-1.82□□□□□ -2.7
APOBP04114 SNORD27.1-201ENST00000516319 72 ntBASIC-1.82□□□□□ -2.7
APOBP04114 SNORD115-31-201ENST00000365318 82 ntBASIC-1.83□□□□□ -2.7
APOBP04114 SNORD115.1-201ENST00000391109 76 ntBASIC-1.83□□□□□ -2.7
APOBP04114 AC073415.1-201ENST00000449240 153 ntBASIC-1.83□□□□□ -2.7
APOBP04114 RNU6-436P-201ENST00000516171 114 ntBASIC-1.83□□□□□ -2.7
APOBP04114 AC005014.3-201ENST00000605985 190 ntBASIC-1.83□□□□□ -2.7
APOBP04114 AP001506.1-201ENST00000615444 211 ntBASIC-1.83□□□□□ -2.7
APOBP04114 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.83□□□□□ -2.7
APOBP04114 MIR519A2-201ENST00000384990 87 ntBASIC-1.83□□□□□ -2.7
APOBP04114 MIR520D-201ENST00000385002 87 ntBASIC-1.83□□□□□ -2.7
APOBP04114 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.83□□□□□ -2.7
APOBP04114 RNU7-154P-201ENST00000516194 62 ntBASIC-1.83□□□□□ -2.7
APOBP04114 AL359920.1-201ENST00000618332 176 ntBASIC-1.83□□□□□ -2.7
APOBP04114 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.83□□□□□ -2.7
APOBP04114 SNORD113-3-201ENST00000364830 72 ntBASIC-1.83□□□□□ -2.7
APOBP04114 RNU6-673P-201ENST00000365084 104 ntBASIC-1.83□□□□□ -2.7
APOBP04114 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.83□□□□□ -2.7
APOBP04114 RNU6-625P-201ENST00000459412 107 ntBASIC-1.83□□□□□ -2.7
APOBP04114 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.83□□□□□ -2.7
APOBP04114 RNU6-664P-201ENST00000362381 107 ntBASIC-1.84□□□□□ -2.7
APOBP04114 SNORA22.1-201ENST00000362701 134 ntBASIC-1.84□□□□□ -2.7
APOBP04114 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.84□□□□□ -2.7
APOBP04114 AL033528.1-201ENST00000453780 140 ntBASIC-1.84□□□□□ -2.7
APOBP04114 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.84□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 231.7 ms