Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 Y_RNA.497-201ENST00000384447 98 ntBASIC0.33□□□□□ -2.36
MMP1P03956 AC107027.2-201ENST00000512197 115 ntBASIC0.33□□□□□ -2.36
MMP1P03956 MIR4491-201ENST00000581087 68 ntBASIC0.33□□□□□ -2.36
MMP1P03956 MIR6082-201ENST00000613604 109 ntBASIC0.33□□□□□ -2.36
MMP1P03956 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.33□□□□□ -2.36
MMP1P03956 AC141273.2-201ENST00000618989 130 ntBASIC0.33□□□□□ -2.36
MMP1P03956 AC078938.1-201ENST00000620993 318 ntBASIC0.33□□□□□ -2.36
MMP1P03956 RNA5SP517-201ENST00000364724 117 ntBASIC0.32□□□□□ -2.36
MMP1P03956 Y_RNA.644-201ENST00000459006 113 ntBASIC0.32□□□□□ -2.36
MMP1P03956 Y_RNA.674-201ENST00000516362 113 ntBASIC0.32□□□□□ -2.36
MMP1P03956 RNU7-121P-201ENST00000516604 62 ntBASIC0.32□□□□□ -2.36
MMP1P03956 RNA5SP94-201ENST00000516917 108 ntBASIC0.32□□□□□ -2.36
MMP1P03956 RNU6-1271P-201ENST00000517049 105 ntBASIC0.32□□□□□ -2.36
MMP1P03956 MIR3678-201ENST00000578455 94 ntBASIC0.32□□□□□ -2.36
MMP1P03956 MIR3658-201ENST00000636291 56 ntBASIC0.32□□□□□ -2.36
MMP1P03956 SNORD115-2-201ENST00000362842 82 ntBASIC0.31□□□□□ -2.36
MMP1P03956 RNU6-508P-201ENST00000363231 103 ntBASIC0.31□□□□□ -2.36
MMP1P03956 Y_RNA.188-201ENST00000363952 111 ntBASIC0.31□□□□□ -2.36
MMP1P03956 RNU4-84P-201ENST00000364200 139 ntBASIC0.31□□□□□ -2.36
MMP1P03956 RNU6-818P-201ENST00000364837 108 ntBASIC0.31□□□□□ -2.36
MMP1P03956 SNORD115-20-201ENST00000365099 82 ntBASIC0.31□□□□□ -2.36
MMP1P03956 MT-TG-201ENST00000387429 68 ntBASIC0.31□□□□□ -2.36
MMP1P03956 RNU6-679P-201ENST00000391003 106 ntBASIC0.31□□□□□ -2.36
MMP1P03956 SNORA75.5-201ENST00000391291 81 ntBASIC0.31□□□□□ -2.36
MMP1P03956 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.31□□□□□ -2.36
MMP1P03956 RNU6-588P-201ENST00000410281 105 ntBASIC0.31□□□□□ -2.36
MMP1P03956 RNU6-1086P-201ENST00000410930 100 ntBASIC0.31□□□□□ -2.36
MMP1P03956 Y_RNA.793-201ENST00000411222 111 ntBASIC0.31□□□□□ -2.36
MMP1P03956 AL512326.2-201ENST00000426359 151 ntBASIC0.31□□□□□ -2.36
MMP1P03956 RNU2-35P-201ENST00000516446 142 ntBASIC0.31□□□□□ -2.36
MMP1P03956 RNU7-35P-201ENST00000517174 62 ntBASIC0.31□□□□□ -2.36
MMP1P03956 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.31□□□□□ -2.36
MMP1P03956 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.31□□□□□ -2.36
MMP1P03956 AC072026.1-201ENST00000605023 201 ntBASIC0.31□□□□□ -2.36
MMP1P03956 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
MMP1P03956 RNU6-403P-201ENST00000363163 104 ntBASIC0.3□□□□□ -2.36
MMP1P03956 Y_RNA.120-201ENST00000363304 110 ntBASIC0.3□□□□□ -2.36
MMP1P03956 Y_RNA.240-201ENST00000364469 95 ntBASIC0.3□□□□□ -2.36
MMP1P03956 Y_RNA.337-201ENST00000365312 102 ntBASIC0.3□□□□□ -2.36
MMP1P03956 RNU6-239P-201ENST00000390990 99 ntBASIC0.3□□□□□ -2.36
MMP1P03956 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.3□□□□□ -2.36
MMP1P03956 RNU6-893P-201ENST00000458841 100 ntBASIC0.3□□□□□ -2.36
MMP1P03956 RNU7-79P-201ENST00000516082 62 ntBASIC0.3□□□□□ -2.36
MMP1P03956 SNORA25.16-201ENST00000516741 121 ntBASIC0.3□□□□□ -2.36
MMP1P03956 RNU6-388P-201ENST00000517012 105 ntBASIC0.3□□□□□ -2.36
MMP1P03956 RNU6-389P-201ENST00000517048 105 ntBASIC0.3□□□□□ -2.36
MMP1P03956 AP003327.1-201ENST00000529684 127 ntBASIC0.3□□□□□ -2.36
MMP1P03956 AC133485.4-201ENST00000561835 220 ntBASIC0.3□□□□□ -2.36
MMP1P03956 MIR6718-201ENST00000616153 80 ntBASIC0.3□□□□□ -2.36
MMP1P03956 AC092634.7-201ENST00000621022 103 ntBASIC0.3□□□□□ -2.36
MMP1P03956 AC067863.3-201ENST00000624172 122 ntBASIC0.3□□□□□ -2.36
MMP1P03956 Y_RNA.32-201ENST00000362589 110 ntBASIC0.29□□□□□ -2.36
MMP1P03956 SNORA36.1-201ENST00000363424 132 ntBASIC0.29□□□□□ -2.36
MMP1P03956 RNU6-682P-201ENST00000363843 106 ntBASIC0.29□□□□□ -2.36
MMP1P03956 RNA5SP117-201ENST00000365294 118 ntBASIC0.29□□□□□ -2.36
MMP1P03956 Y_RNA.515-201ENST00000384535 112 ntBASIC0.29□□□□□ -2.36
MMP1P03956 MIR644A-201ENST00000385262 94 ntBASIC0.29□□□□□ -2.36
MMP1P03956 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
MMP1P03956 RPL39P25-201ENST00000449384 154 ntBASIC0.29□□□□□ -2.36
MMP1P03956 MIR1270-201ENST00000459320 83 ntBASIC0.29□□□□□ -2.36
MMP1P03956 Y_RNA.651-201ENST00000459380 103 ntBASIC0.29□□□□□ -2.36
MMP1P03956 RNU6-138P-201ENST00000515952 107 ntBASIC0.29□□□□□ -2.36
MMP1P03956 RNA5SP476-201ENST00000516613 103 ntBASIC0.29□□□□□ -2.36
MMP1P03956 RNU6-765P-201ENST00000516916 99 ntBASIC0.29□□□□□ -2.36
MMP1P03956 AP002392.1-201ENST00000537692 208 ntBASIC0.29□□□□□ -2.36
MMP1P03956 uc_338.16-201ENST00000621804 95 ntBASIC0.29□□□□□ -2.36
MMP1P03956 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
MMP1P03956 RNU6-200P-201ENST00000364743 107 ntBASIC0.28□□□□□ -2.36
MMP1P03956 RNU6-690P-201ENST00000365242 106 ntBASIC0.28□□□□□ -2.36
MMP1P03956 Y_RNA.366-201ENST00000365540 102 ntBASIC0.28□□□□□ -2.36
MMP1P03956 Y_RNA.401-201ENST00000383965 117 ntBASIC0.28□□□□□ -2.36
MMP1P03956 RNU7-113P-201ENST00000459273 62 ntBASIC0.28□□□□□ -2.36
MMP1P03956 RNU6-240P-201ENST00000516098 97 ntBASIC0.28□□□□□ -2.36
MMP1P03956 SNORA31.14-201ENST00000516728 116 ntBASIC0.28□□□□□ -2.36
MMP1P03956 RNU6-861P-201ENST00000516745 106 ntBASIC0.28□□□□□ -2.36
MMP1P03956 MTND5P34-201ENST00000568888 325 ntBASIC0.28□□□□□ -2.36
MMP1P03956 MIR3646-201ENST00000578301 84 ntBASIC0.28□□□□□ -2.36
MMP1P03956 MIR4305-201ENST00000583252 102 ntBASIC0.28□□□□□ -2.36
MMP1P03956 MIR6844-201ENST00000637122 62 ntBASIC0.28□□□□□ -2.36
MMP1P03956 MIR103A1-201ENST00000362165 78 ntBASIC0.27□□□□□ -2.37
MMP1P03956 SNORD118-201ENST00000363593 134 ntBASIC0.27□□□□□ -2.37
MMP1P03956 Y_RNA.357-201ENST00000365487 109 ntBASIC0.27□□□□□ -2.37
MMP1P03956 Y_RNA.441-201ENST00000384123 112 ntBASIC0.27□□□□□ -2.37
MMP1P03956 SNORA8.2-201ENST00000384372 139 ntBASIC0.27□□□□□ -2.37
MMP1P03956 Y_RNA.531-201ENST00000384589 121 ntBASIC0.27□□□□□ -2.37
MMP1P03956 RNU6-291P-201ENST00000384720 107 ntBASIC0.27□□□□□ -2.37
MMP1P03956 MIR518A1-201ENST00000385068 85 ntBASIC0.27□□□□□ -2.37
MMP1P03956 AL022718.1-201ENST00000412004 84 ntBASIC0.27□□□□□ -2.37
MMP1P03956 RNU7-120P-201ENST00000459334 63 ntBASIC0.27□□□□□ -2.37
MMP1P03956 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
MMP1P03956 RNA5SP285-201ENST00000516619 119 ntBASIC0.27□□□□□ -2.37
MMP1P03956 RNA5SP33-201ENST00000516687 98 ntBASIC0.27□□□□□ -2.37
MMP1P03956 MIR548AE2-201ENST00000583456 67 ntBASIC0.27□□□□□ -2.37
MMP1P03956 AL359881.1-201ENST00000602916 267 ntBASIC0.27□□□□□ -2.37
MMP1P03956 SNORA25.18-201ENST00000607153 114 ntBASIC0.27□□□□□ -2.37
MMP1P03956 AC011603.4-201ENST00000611325 277 ntBASIC0.27□□□□□ -2.37
MMP1P03956 SNORD44.1-201ENST00000363202 61 ntBASIC0.26□□□□□ -2.37
MMP1P03956 RNU6-309P-201ENST00000364573 106 ntBASIC0.26□□□□□ -2.37
MMP1P03956 SNORA32-201ENST00000384072 121 ntBASIC0.26□□□□□ -2.37
MMP1P03956 SNORA72.6-201ENST00000384520 129 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 239.8 ms