Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 RNU1-148P-201ENST00000384472 162 ntBASIC1.64□□□□□ -2.15
COL3A1P02461 MIR597-201ENST00000384968 97 ntBASIC1.64□□□□□ -2.15
COL3A1P02461 RNU6-913P-201ENST00000390913 95 ntBASIC1.64□□□□□ -2.15
COL3A1P02461 U8.15-201ENST00000390947 134 ntBASIC1.64□□□□□ -2.15
COL3A1P02461 MIR1270-201ENST00000459320 83 ntBASIC1.64□□□□□ -2.15
COL3A1P02461 RNU7-2P-201ENST00000516096 62 ntBASIC1.64□□□□□ -2.15
COL3A1P02461 RNA5SP481-201ENST00000516814 122 ntBASIC1.64□□□□□ -2.15
COL3A1P02461 MIR6734-201ENST00000621166 68 ntBASIC1.64□□□□□ -2.15
COL3A1P02461 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL3A1P02461 Y_RNA.73-201ENST00000362910 113 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 MIR660-201ENST00000385235 97 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 RNU6-402P-201ENST00000410678 103 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 RPS29P23-201ENST00000458635 123 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 RNU7-26P-201ENST00000458980 63 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 SUB1P4-201ENST00000566062 339 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 MIR5588-201ENST00000581890 63 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 RNU6-86P-201ENST00000606534 107 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 AC021506.2-201ENST00000612354 169 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 AC080100.1-201ENST00000624239 5356 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 Y_RNA.426-201ENST00000384068 113 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 SNORD28B-201ENST00000390993 75 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 MIR1283-2-201ENST00000408621 87 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 AC245047.7-201ENST00000440265 293 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 snoU13.27-201ENST00000459278 104 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 RNU7-171P-201ENST00000459581 62 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 RNVU1-2-201ENST00000516326 135 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 FAM106DP-201ENST00000586416 501 ntBASIC1.63□□□□□ -2.15
COL3A1P02461 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.63□□□□□ -2.15
COL3A1P02461 SNORD38.1-201ENST00000363863 68 ntBASIC1.62□□□□□ -2.15
COL3A1P02461 SNORA48.1-201ENST00000390879 135 ntBASIC1.62□□□□□ -2.15
COL3A1P02461 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.62□□□□□ -2.15
COL3A1P02461 RNA5SP225-201ENST00000410874 135 ntBASIC1.62□□□□□ -2.15
COL3A1P02461 Y_RNA.620-201ENST00000411009 88 ntBASIC1.62□□□□□ -2.15
COL3A1P02461 RPL23AP6-201ENST00000446637 472 ntBASIC1.62□□□□□ -2.15
COL3A1P02461 RNU6-267P-201ENST00000516714 103 ntBASIC1.62□□□□□ -2.15
COL3A1P02461 MIR514B-201ENST00000516774 80 ntBASIC1.62□□□□□ -2.15
COL3A1P02461 RNU6-1223P-201ENST00000517124 104 ntBASIC1.62□□□□□ -2.15
COL3A1P02461 MIR4666B-201ENST00000578142 81 ntBASIC1.62□□□□□ -2.15
COL3A1P02461 MIR4668-201ENST00000582284 70 ntBASIC1.62□□□□□ -2.15
COL3A1P02461 U1.36-201ENST00000620684 176 ntBASIC1.62□□□□□ -2.15
COL3A1P02461 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.62□□□□□ -2.15
COL3A1P02461 RNU6-112P-201ENST00000363599 104 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 RNU6-219P-201ENST00000364728 107 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 Y_RNA.437-201ENST00000384113 113 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 RNY1P4-201ENST00000384595 115 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 MIR520E-201ENST00000384867 87 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 MIR526A1-201ENST00000384897 85 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 MIR518A2-201ENST00000384966 87 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 MIR524-201ENST00000385242 87 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
COL3A1P02461 RNU6-447P-201ENST00000410293 104 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 RNU6-1118P-201ENST00000410382 104 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 RNU6-1076P-201ENST00000410397 104 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 RNU6-355P-201ENST00000410427 104 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 RNU6-791P-201ENST00000410467 104 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 RNU6-705P-201ENST00000410601 104 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 RNU6-1100P-201ENST00000410691 104 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 RNU6-1190P-201ENST00000410811 104 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 RNU6-860P-201ENST00000410860 104 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 RNU6-1217P-201ENST00000411276 104 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 RNU6-785P-201ENST00000411324 104 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 AC090844.1-201ENST00000422019 156 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 RPS27P21-201ENST00000486977 252 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 UBL5P1-201ENST00000507979 193 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 SNORA74.3-201ENST00000517108 154 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 RNU7-35P-201ENST00000517174 62 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 RNU6-90P-201ENST00000606352 106 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 U6.90-201ENST00000614007 104 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 MIR376B-201ENST00000614515 100 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 U6.70-201ENST00000620287 104 ntBASIC1.61□□□□□ -2.15
COL3A1P02461 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.61□□□□□ -2.15
COL3A1P02461 Y_RNA.244-201ENST00000364484 109 ntBASIC1.6□□□□□ -2.15
COL3A1P02461 RNU6-1163P-201ENST00000364516 107 ntBASIC1.6□□□□□ -2.15
COL3A1P02461 MIR598-201ENST00000384868 97 ntBASIC1.6□□□□□ -2.15
COL3A1P02461 MIR206-201ENST00000384872 86 ntBASIC1.6□□□□□ -2.15
COL3A1P02461 RNU6-279P-201ENST00000391297 101 ntBASIC1.6□□□□□ -2.15
COL3A1P02461 RPS29P28-201ENST00000446439 141 ntBASIC1.6□□□□□ -2.15
COL3A1P02461 RNU7-79P-201ENST00000516082 62 ntBASIC1.6□□□□□ -2.15
COL3A1P02461 RNU7-43P-201ENST00000516554 64 ntBASIC1.6□□□□□ -2.15
COL3A1P02461 MIR424-201ENST00000362227 98 ntBASIC1.59□□□□□ -2.15
COL3A1P02461 Y_RNA.313-201ENST00000365095 103 ntBASIC1.59□□□□□ -2.15
COL3A1P02461 RNU6-787P-201ENST00000384032 107 ntBASIC1.59□□□□□ -2.15
COL3A1P02461 RNU6-296P-201ENST00000384608 107 ntBASIC1.59□□□□□ -2.15
COL3A1P02461 RNU6-360P-201ENST00000390944 104 ntBASIC1.59□□□□□ -2.15
COL3A1P02461 HMGN2P39-201ENST00000398005 273 ntBASIC1.59□□□□□ -2.15
COL3A1P02461 RNA5SP437-201ENST00000517249 129 ntBASIC1.59□□□□□ -2.15
COL3A1P02461 AC103810.7-201ENST00000607821 91 ntBASIC1.59□□□□□ -2.15
COL3A1P02461 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.59□□□□□ -2.15
COL3A1P02461 MIR6788-201ENST00000618842 66 ntBASIC1.59□□□□□ -2.15
COL3A1P02461 SNORD114-10-201ENST00000363409 72 ntBASIC1.58□□□□□ -2.16
COL3A1P02461 SNORD38.2-201ENST00000384470 69 ntBASIC1.58□□□□□ -2.16
COL3A1P02461 Y_RNA.611-201ENST00000410682 108 ntBASIC1.58□□□□□ -2.16
COL3A1P02461 RNU6-1086P-201ENST00000410930 100 ntBASIC1.58□□□□□ -2.16
COL3A1P02461 RNA5SP501-201ENST00000410990 112 ntBASIC1.58□□□□□ -2.16
COL3A1P02461 HMGN1P33-201ENST00000432945 451 ntBASIC1.58□□□□□ -2.16
COL3A1P02461 RNU6-1006P-201ENST00000516998 103 ntBASIC1.58□□□□□ -2.16
COL3A1P02461 MIR151B-201ENST00000584249 96 ntBASIC1.58□□□□□ -2.16
COL3A1P02461 Z97988.1-201ENST00000637697 135 ntBASIC1.58□□□□□ -2.16
COL3A1P02461 Y_RNA.98-201ENST00000363109 102 ntBASIC1.57□□□□□ -2.16
COL3A1P02461 Y_RNA.247-201ENST00000364500 92 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms