Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.57□□□□□ -2.66
TNFP01375 RNU6-38P-201ENST00000384085 107 ntBASIC-1.57□□□□□ -2.66
TNFP01375 RNU6-636P-201ENST00000384598 107 ntBASIC-1.57□□□□□ -2.66
TNFP01375 MIR1255B2-201ENST00000408618 67 ntBASIC-1.57□□□□□ -2.66
TNFP01375 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.57□□□□□ -2.66
TNFP01375 snoU109.3-201ENST00000459477 145 ntBASIC-1.57□□□□□ -2.66
TNFP01375 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.57□□□□□ -2.66
TNFP01375 MIR4696-201ENST00000581431 70 ntBASIC-1.57□□□□□ -2.66
TNFP01375 AL022161.1-201ENST00000604390 213 ntBASIC-1.57□□□□□ -2.66
TNFP01375 RNU6-766P-201ENST00000362478 107 ntBASIC-1.58□□□□□ -2.66
TNFP01375 SNORD36A-201ENST00000362874 73 ntBASIC-1.58□□□□□ -2.66
TNFP01375 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.58□□□□□ -2.66
TNFP01375 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.58□□□□□ -2.66
TNFP01375 RNY4P28-201ENST00000365281 93 ntBASIC-1.58□□□□□ -2.66
TNFP01375 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.58□□□□□ -2.66
TNFP01375 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.58□□□□□ -2.66
TNFP01375 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.58□□□□□ -2.66
TNFP01375 MIR181A1-201ENST00000385026 110 ntBASIC-1.58□□□□□ -2.66
TNFP01375 RNU7-88P-201ENST00000458752 63 ntBASIC-1.58□□□□□ -2.66
TNFP01375 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.58□□□□□ -2.66
TNFP01375 AC091951.2-201ENST00000500762 203 ntBASIC-1.58□□□□□ -2.66
TNFP01375 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.58□□□□□ -2.66
TNFP01375 RNU6-850P-201ENST00000516934 103 ntBASIC-1.58□□□□□ -2.66
TNFP01375 AC097639.2-201ENST00000603159 172 ntBASIC-1.58□□□□□ -2.66
TNFP01375 RNU6-90P-201ENST00000606352 106 ntBASIC-1.58□□□□□ -2.66
TNFP01375 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.58□□□□□ -2.66
TNFP01375 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.59□□□□□ -2.66
TNFP01375 RNU5F-7P-201ENST00000363696 115 ntBASIC-1.59□□□□□ -2.66
TNFP01375 RNY3P11-201ENST00000364153 102 ntBASIC-1.59□□□□□ -2.66
TNFP01375 RNU6-20P-201ENST00000384106 107 ntBASIC-1.59□□□□□ -2.66
TNFP01375 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.59□□□□□ -2.66
TNFP01375 RNU6-101P-201ENST00000410323 104 ntBASIC-1.59□□□□□ -2.66
TNFP01375 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.59□□□□□ -2.66
TNFP01375 RNU7-63P-201ENST00000459054 62 ntBASIC-1.59□□□□□ -2.66
TNFP01375 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.59□□□□□ -2.66
TNFP01375 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.59□□□□□ -2.66
TNFP01375 U7.5-201ENST00000517224 61 ntBASIC-1.59□□□□□ -2.66
TNFP01375 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.59□□□□□ -2.66
TNFP01375 MTATP6P24-201ENST00000576835 677 ntBASIC-1.59□□□□□ -2.66
TNFP01375 MIR4724-201ENST00000579485 89 ntBASIC-1.59□□□□□ -2.66
TNFP01375 MIR548AE2-201ENST00000583456 67 ntBASIC-1.59□□□□□ -2.66
TNFP01375 AC005357.1-201ENST00000588399 301 ntBASIC-1.59□□□□□ -2.66
TNFP01375 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.6□□□□□ -2.67
TNFP01375 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.6□□□□□ -2.67
TNFP01375 SNORA33.1-201ENST00000364957 130 ntBASIC-1.6□□□□□ -2.67
TNFP01375 SNORD116-9-201ENST00000384000 95 ntBASIC-1.6□□□□□ -2.67
TNFP01375 SNORD116-3-201ENST00000384287 95 ntBASIC-1.6□□□□□ -2.67
TNFP01375 SNORD116-8-201ENST00000384365 95 ntBASIC-1.6□□□□□ -2.67
TNFP01375 SNORD116-7-201ENST00000384404 95 ntBASIC-1.6□□□□□ -2.67
TNFP01375 SNORD116-5-201ENST00000384462 95 ntBASIC-1.6□□□□□ -2.67
TNFP01375 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.6□□□□□ -2.67
TNFP01375 SNORD12B-201ENST00000410433 91 ntBASIC-1.6□□□□□ -2.67
TNFP01375 SNORA36B-201ENST00000410438 131 ntBASIC-1.6□□□□□ -2.67
TNFP01375 RNU2-66P-201ENST00000410650 161 ntBASIC-1.6□□□□□ -2.67
TNFP01375 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.6□□□□□ -2.67
TNFP01375 AL160004.2-201ENST00000432935 350 ntBASIC-1.6□□□□□ -2.67
TNFP01375 snoU13.10-201ENST00000459301 103 ntBASIC-1.6□□□□□ -2.67
TNFP01375 RNU6-719P-201ENST00000516671 104 ntBASIC-1.6□□□□□ -2.67
TNFP01375 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.6□□□□□ -2.67
TNFP01375 MIR5701-3-201ENST00000578890 82 ntBASIC-1.6□□□□□ -2.67
TNFP01375 MIR5701-1-201ENST00000585138 82 ntBASIC-1.6□□□□□ -2.67
TNFP01375 AC084782.3-201ENST00000612282 578 ntBASIC-1.6□□□□□ -2.67
TNFP01375 AC133104.2-201ENST00000615272 193 ntBASIC-1.6□□□□□ -2.67
TNFP01375 MIR5701-2-201ENST00000615634 82 ntBASIC-1.6□□□□□ -2.67
TNFP01375 MIR302B-201ENST00000362188 73 ntBASIC-1.61□□□□□ -2.67
TNFP01375 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.61□□□□□ -2.67
TNFP01375 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.61□□□□□ -2.67
TNFP01375 RNU6-297P-201ENST00000384636 107 ntBASIC-1.61□□□□□ -2.67
TNFP01375 MIR206-201ENST00000384872 86 ntBASIC-1.61□□□□□ -2.67
TNFP01375 MTND1P34-201ENST00000438556 671 ntBASIC-1.61□□□□□ -2.67
TNFP01375 SNORD77.4-201ENST00000516158 81 ntBASIC-1.61□□□□□ -2.67
TNFP01375 RNU6-191P-201ENST00000516295 94 ntBASIC-1.61□□□□□ -2.67
TNFP01375 RNU6-155P-201ENST00000516347 100 ntBASIC-1.61□□□□□ -2.67
TNFP01375 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.61□□□□□ -2.67
TNFP01375 AP001506.1-201ENST00000615444 211 ntBASIC-1.61□□□□□ -2.67
TNFP01375 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.62□□□□□ -2.67
TNFP01375 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.62□□□□□ -2.67
TNFP01375 RNU6-694P-201ENST00000364071 147 ntBASIC-1.62□□□□□ -2.67
TNFP01375 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.62□□□□□ -2.67
TNFP01375 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.62□□□□□ -2.67
TNFP01375 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.62□□□□□ -2.67
TNFP01375 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.62□□□□□ -2.67
TNFP01375 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.62□□□□□ -2.67
TNFP01375 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.62□□□□□ -2.67
TNFP01375 RNU6-132P-201ENST00000383863 107 ntBASIC-1.62□□□□□ -2.67
TNFP01375 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.62□□□□□ -2.67
TNFP01375 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.62□□□□□ -2.67
TNFP01375 MIR519A2-201ENST00000384990 87 ntBASIC-1.62□□□□□ -2.67
TNFP01375 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.62□□□□□ -2.67
TNFP01375 Z83846.1-201ENST00000446798 265 ntBASIC-1.62□□□□□ -2.67
TNFP01375 AL033528.1-201ENST00000453780 140 ntBASIC-1.62□□□□□ -2.67
TNFP01375 RNU7-48P-201ENST00000458875 63 ntBASIC-1.62□□□□□ -2.67
TNFP01375 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.62□□□□□ -2.67
TNFP01375 RNU7-141P-201ENST00000459304 62 ntBASIC-1.62□□□□□ -2.67
TNFP01375 RNU6-126P-201ENST00000516685 103 ntBASIC-1.62□□□□□ -2.67
TNFP01375 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.62□□□□□ -2.67
TNFP01375 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.62□□□□□ -2.67
TNFP01375 AL080274.1-201ENST00000605565 220 ntBASIC-1.62□□□□□ -2.67
TNFP01375 AC092794.1-201ENST00000612734 582 ntBASIC-1.62□□□□□ -2.67
TNFP01375 MIR376B-201ENST00000614515 100 ntBASIC-1.62□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 220.4 ms