Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AL137067.1-201ENST00000615933 120 ntBASIC0.78□□□□□ -2.28
CLDN1O95832 TUG1_4.1-201ENST00000619464 181 ntBASIC0.78□□□□□ -2.28
CLDN1O95832 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CLDN1O95832 SNORA18-201ENST00000384416 132 ntBASIC0.77□□□□□ -2.29
CLDN1O95832 Y_RNA.586-201ENST00000391146 98 ntBASIC0.77□□□□□ -2.29
CLDN1O95832 MIR942-201ENST00000401111 86 ntBASIC0.77□□□□□ -2.29
CLDN1O95832 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.77□□□□□ -2.29
CLDN1O95832 RNU6-994P-201ENST00000410507 111 ntBASIC0.77□□□□□ -2.29
CLDN1O95832 RPS26P5-201ENST00000418544 335 ntBASIC0.77□□□□□ -2.29
CLDN1O95832 AL512326.2-201ENST00000426359 151 ntBASIC0.77□□□□□ -2.29
CLDN1O95832 AC004941.2-201ENST00000427009 228 ntBASIC0.77□□□□□ -2.29
CLDN1O95832 AL158147.1-201ENST00000443970 75 ntBASIC0.77□□□□□ -2.29
CLDN1O95832 RNU7-164P-201ENST00000459221 62 ntBASIC0.77□□□□□ -2.29
CLDN1O95832 AC133485.1-201ENST00000567176 124 ntBASIC0.77□□□□□ -2.29
CLDN1O95832 AC141846.1-201ENST00000568348 142 ntBASIC0.77□□□□□ -2.29
CLDN1O95832 AC138907.6-201ENST00000568401 126 ntBASIC0.77□□□□□ -2.29
CLDN1O95832 MIR4661-201ENST00000582720 75 ntBASIC0.77□□□□□ -2.29
CLDN1O95832 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
CLDN1O95832 RNU6-934P-201ENST00000365154 107 ntBASIC0.76□□□□□ -2.29
CLDN1O95832 RNU6-949P-201ENST00000384040 107 ntBASIC0.76□□□□□ -2.29
CLDN1O95832 MIRLET7F2-201ENST00000385277 83 ntBASIC0.76□□□□□ -2.29
CLDN1O95832 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.76□□□□□ -2.29
CLDN1O95832 SNORD83.1-201ENST00000411362 77 ntBASIC0.76□□□□□ -2.29
CLDN1O95832 AC096949.1-201ENST00000412047 152 ntBASIC0.76□□□□□ -2.29
CLDN1O95832 AC067940.1-201ENST00000458411 300 ntBASIC0.76□□□□□ -2.29
CLDN1O95832 PDCD5P2-201ENST00000507570 312 ntBASIC0.76□□□□□ -2.29
CLDN1O95832 RNY4P20-201ENST00000516678 93 ntBASIC0.76□□□□□ -2.29
CLDN1O95832 RNU6-774P-201ENST00000363238 107 ntBASIC0.75□□□□□ -2.29
CLDN1O95832 RNU6-704P-201ENST00000364162 103 ntBASIC0.75□□□□□ -2.29
CLDN1O95832 Y_RNA.294-201ENST00000364916 102 ntBASIC0.75□□□□□ -2.29
CLDN1O95832 RNU6-187P-201ENST00000384139 106 ntBASIC0.75□□□□□ -2.29
CLDN1O95832 RNA5SP193-201ENST00000410353 107 ntBASIC0.75□□□□□ -2.29
CLDN1O95832 RNA5SP237-201ENST00000410414 113 ntBASIC0.75□□□□□ -2.29
CLDN1O95832 MIR1270-201ENST00000459320 83 ntBASIC0.75□□□□□ -2.29
CLDN1O95832 HAR1A.1-201ENST00000459583 118 ntBASIC0.75□□□□□ -2.29
CLDN1O95832 RN7SKP19-201ENST00000516016 252 ntBASIC0.75□□□□□ -2.29
CLDN1O95832 MIR548AE2-201ENST00000583456 67 ntBASIC0.75□□□□□ -2.29
CLDN1O95832 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
CLDN1O95832 AC020891.4-201ENST00000605745 93 ntBASIC0.75□□□□□ -2.29
CLDN1O95832 MIR330-201ENST00000362196 94 ntBASIC0.74□□□□□ -2.29
CLDN1O95832 Y_RNA.299-201ENST00000364973 94 ntBASIC0.74□□□□□ -2.29
CLDN1O95832 RNY1P13-201ENST00000365030 105 ntBASIC0.74□□□□□ -2.29
CLDN1O95832 ACA64.5-201ENST00000516207 127 ntBASIC0.74□□□□□ -2.29
CLDN1O95832 RNA5SP33-201ENST00000516687 98 ntBASIC0.74□□□□□ -2.29
CLDN1O95832 MIR4771-2-201ENST00000577758 74 ntBASIC0.74□□□□□ -2.29
CLDN1O95832 MIR4771-1-201ENST00000582617 74 ntBASIC0.74□□□□□ -2.29
CLDN1O95832 MIR4676-201ENST00000583078 72 ntBASIC0.74□□□□□ -2.29
CLDN1O95832 FAM71BP1-201ENST00000604431 523 ntBASIC0.74□□□□□ -2.29
CLDN1O95832 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.74□□□□□ -2.29
CLDN1O95832 AL136317.1-201ENST00000612653 226 ntBASIC0.74□□□□□ -2.29
CLDN1O95832 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CLDN1O95832 MIR1-1-201ENST00000362147 71 ntBASIC0.73□□□□□ -2.29
CLDN1O95832 RNU6-1335P-201ENST00000365426 107 ntBASIC0.73□□□□□ -2.29
CLDN1O95832 MIR539-201ENST00000365690 78 ntBASIC0.73□□□□□ -2.29
CLDN1O95832 MIR548M-201ENST00000408260 86 ntBASIC0.73□□□□□ -2.29
CLDN1O95832 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.73□□□□□ -2.29
CLDN1O95832 MIR1197-201ENST00000408818 88 ntBASIC0.73□□□□□ -2.29
CLDN1O95832 RNA5SP136-201ENST00000410906 107 ntBASIC0.73□□□□□ -2.29
CLDN1O95832 SUMO1P3-201ENST00000439961 304 ntBASIC0.73□□□□□ -2.29
CLDN1O95832 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.73□□□□□ -2.29
CLDN1O95832 RNU7-185P-201ENST00000459215 60 ntBASIC0.73□□□□□ -2.29
CLDN1O95832 MIR4804-201ENST00000581683 73 ntBASIC0.73□□□□□ -2.29
CLDN1O95832 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
CLDN1O95832 RNU1-36P-201ENST00000365130 165 ntBASIC0.72□□□□□ -2.29
CLDN1O95832 MIR125B2-201ENST00000385128 89 ntBASIC0.72□□□□□ -2.29
CLDN1O95832 MIR1257-201ENST00000408490 117 ntBASIC0.72□□□□□ -2.29
CLDN1O95832 RNU4-69P-201ENST00000410677 143 ntBASIC0.72□□□□□ -2.29
CLDN1O95832 RNU5E-3P-201ENST00000515913 68 ntBASIC0.72□□□□□ -2.29
CLDN1O95832 AC022523.2-201ENST00000561045 150 ntBASIC0.72□□□□□ -2.29
CLDN1O95832 MIR4711-201ENST00000578274 70 ntBASIC0.72□□□□□ -2.29
CLDN1O95832 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.72□□□□□ -2.29
CLDN1O95832 AC025627.3-201ENST00000582078 182 ntBASIC0.72□□□□□ -2.29
CLDN1O95832 SNORD92-201ENST00000585078 85 ntBASIC0.72□□□□□ -2.29
CLDN1O95832 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.72□□□□□ -2.29
CLDN1O95832 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
CLDN1O95832 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CLDN1O95832 SNORD58C-201ENST00000365223 64 ntBASIC0.71□□□□□ -2.3
CLDN1O95832 RNU6-1104P-201ENST00000384723 104 ntBASIC0.71□□□□□ -2.3
CLDN1O95832 RNU6-1237P-201ENST00000384777 107 ntBASIC0.71□□□□□ -2.3
CLDN1O95832 MIR508-201ENST00000384857 115 ntBASIC0.71□□□□□ -2.3
CLDN1O95832 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
CLDN1O95832 MIR100-201ENST00000385259 80 ntBASIC0.71□□□□□ -2.3
CLDN1O95832 U8.15-201ENST00000390947 134 ntBASIC0.71□□□□□ -2.3
CLDN1O95832 SNORD89-201ENST00000390981 114 ntBASIC0.71□□□□□ -2.3
CLDN1O95832 AL603908.1-201ENST00000406098 201 ntBASIC0.71□□□□□ -2.3
CLDN1O95832 AC015818.7-201ENST00000428754 109 ntBASIC0.71□□□□□ -2.3
CLDN1O95832 AC087499.7-201ENST00000441958 109 ntBASIC0.71□□□□□ -2.3
CLDN1O95832 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.71□□□□□ -2.3
CLDN1O95832 COX6CP6-201ENST00000490840 228 ntBASIC0.71□□□□□ -2.3
CLDN1O95832 RNU7-79P-201ENST00000516082 62 ntBASIC0.71□□□□□ -2.3
CLDN1O95832 RNU6-781P-201ENST00000516377 101 ntBASIC0.71□□□□□ -2.3
CLDN1O95832 AC023934.1-201ENST00000574529 2389 ntBASIC0.7□□□□□ -2.3
CLDN1O95832 Y_RNA.198-201ENST00000364013 98 ntBASIC0.7□□□□□ -2.3
CLDN1O95832 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CLDN1O95832 SNORD105-201ENST00000386910 85 ntBASIC0.7□□□□□ -2.3
CLDN1O95832 MT-TI-201ENST00000387365 69 ntBASIC0.7□□□□□ -2.3
CLDN1O95832 Y_RNA.588-201ENST00000391254 102 ntBASIC0.7□□□□□ -2.3
CLDN1O95832 RNU7-56P-201ENST00000458744 62 ntBASIC0.7□□□□□ -2.3
CLDN1O95832 RNU7-137P-201ENST00000516788 62 ntBASIC0.7□□□□□ -2.3
CLDN1O95832 AL353765.1-201ENST00000605514 183 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms