Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 RNU6-1321P-201ENST00000390905 107 ntBASIC1.83□□□□□ -2.12
PRPF40AO75400 SNORA70.22-201ENST00000517160 124 ntBASIC1.83□□□□□ -2.12
PRPF40AO75400 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.83□□□□□ -2.12
PRPF40AO75400 AC012676.2-201ENST00000619258 186 ntBASIC1.83□□□□□ -2.12
PRPF40AO75400 Y_RNA.98-201ENST00000363109 102 ntBASIC1.82□□□□□ -2.12
PRPF40AO75400 MIR222-201ENST00000384992 110 ntBASIC1.82□□□□□ -2.12
PRPF40AO75400 MIR577-201ENST00000385196 96 ntBASIC1.82□□□□□ -2.12
PRPF40AO75400 MIR320A-201ENST00000385302 82 ntBASIC1.82□□□□□ -2.12
PRPF40AO75400 MIR18B-201ENST00000454574 71 ntBASIC1.82□□□□□ -2.12
PRPF40AO75400 RNU7-48P-201ENST00000458875 63 ntBASIC1.82□□□□□ -2.12
PRPF40AO75400 uc_338.6-201ENST00000613544 171 ntBASIC1.82□□□□□ -2.12
PRPF40AO75400 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
PRPF40AO75400 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
PRPF40AO75400 RNU6-1313P-201ENST00000362622 102 ntBASIC1.81□□□□□ -2.12
PRPF40AO75400 RNU6-832P-201ENST00000363319 107 ntBASIC1.81□□□□□ -2.12
PRPF40AO75400 SNORA19.1-201ENST00000410656 129 ntBASIC1.81□□□□□ -2.12
PRPF40AO75400 AL353813.1-201ENST00000440700 253 ntBASIC1.81□□□□□ -2.12
PRPF40AO75400 RNU7-90P-201ENST00000459216 62 ntBASIC1.81□□□□□ -2.12
PRPF40AO75400 RNU7-21P-201ENST00000459430 62 ntBASIC1.81□□□□□ -2.12
PRPF40AO75400 AC023790.1-201ENST00000482174 347 ntBASIC1.81□□□□□ -2.12
PRPF40AO75400 AC108729.3-201ENST00000513484 108 ntBASIC1.81□□□□□ -2.12
PRPF40AO75400 RNA5SP458-201ENST00000516188 119 ntBASIC1.81□□□□□ -2.12
PRPF40AO75400 RNU6-168P-201ENST00000516189 101 ntBASIC1.81□□□□□ -2.12
PRPF40AO75400 RNU6-970P-201ENST00000516312 107 ntBASIC1.81□□□□□ -2.12
PRPF40AO75400 AC023827.1-201ENST00000569247 97 ntBASIC1.81□□□□□ -2.12
PRPF40AO75400 AC096720.1-201ENST00000604441 183 ntBASIC1.81□□□□□ -2.12
PRPF40AO75400 RNU6-1099P-201ENST00000363533 107 ntBASIC1.8□□□□□ -2.12
PRPF40AO75400 RNU6-1201P-201ENST00000384227 107 ntBASIC1.8□□□□□ -2.12
PRPF40AO75400 Y_RNA.544-201ENST00000384650 113 ntBASIC1.8□□□□□ -2.12
PRPF40AO75400 MIR590-201ENST00000385008 97 ntBASIC1.8□□□□□ -2.12
PRPF40AO75400 RNU6-1307P-201ENST00000391012 103 ntBASIC1.8□□□□□ -2.12
PRPF40AO75400 RPS29P28-201ENST00000446439 141 ntBASIC1.8□□□□□ -2.12
PRPF40AO75400 SNORD79.1-201ENST00000516069 84 ntBASIC1.8□□□□□ -2.12
PRPF40AO75400 RNU6-904P-201ENST00000516206 101 ntBASIC1.8□□□□□ -2.12
PRPF40AO75400 AC036111.3-201ENST00000526389 112 ntBASIC1.8□□□□□ -2.12
PRPF40AO75400 SNORD111-201ENST00000408139 94 ntBASIC1.79□□□□□ -2.12
PRPF40AO75400 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.79□□□□□ -2.12
PRPF40AO75400 RNU6-537P-201ENST00000517277 103 ntBASIC1.79□□□□□ -2.12
PRPF40AO75400 AL442128.1-201ENST00000615151 90 ntBASIC1.79□□□□□ -2.12
PRPF40AO75400 Y_RNA.377-201ENST00000365644 108 ntBASIC1.78□□□□□ -2.12
PRPF40AO75400 U8.15-201ENST00000390947 134 ntBASIC1.78□□□□□ -2.12
PRPF40AO75400 SNORA17.3-201ENST00000391159 129 ntBASIC1.78□□□□□ -2.12
PRPF40AO75400 MIR1304-201ENST00000408243 91 ntBASIC1.78□□□□□ -2.12
PRPF40AO75400 RNU1-98P-201ENST00000458992 160 ntBASIC1.78□□□□□ -2.12
PRPF40AO75400 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.78□□□□□ -2.12
PRPF40AO75400 MIR376B-201ENST00000614515 100 ntBASIC1.78□□□□□ -2.12
PRPF40AO75400 AC106800.4-201ENST00000614905 153 ntBASIC1.78□□□□□ -2.12
PRPF40AO75400 Y_RNA.818-201ENST00000618813 71 ntBASIC1.78□□□□□ -2.12
PRPF40AO75400 AP001362.1-201ENST00000625165 124 ntBASIC1.78□□□□□ -2.12
PRPF40AO75400 AC008163.1-202ENST00000636004 2889 ntBASIC1.77□□□□□ -2.13
PRPF40AO75400 SNORD38.2-201ENST00000384470 69 ntBASIC1.77□□□□□ -2.13
PRPF40AO75400 MIR34C-201ENST00000384831 77 ntBASIC1.77□□□□□ -2.13
PRPF40AO75400 SNORD93-201ENST00000408813 74 ntBASIC1.77□□□□□ -2.13
PRPF40AO75400 RNA5SP89-201ENST00000410300 108 ntBASIC1.77□□□□□ -2.13
PRPF40AO75400 RNU6-994P-201ENST00000410507 111 ntBASIC1.77□□□□□ -2.13
PRPF40AO75400 AC108667.1-201ENST00000428618 249 ntBASIC1.77□□□□□ -2.13
PRPF40AO75400 AL603825.1-201ENST00000438481 80 ntBASIC1.77□□□□□ -2.13
PRPF40AO75400 AC023934.1-201ENST00000574529 2389 ntBASIC1.76□□□□□ -2.13
PRPF40AO75400 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
PRPF40AO75400 SNORD12-201ENST00000391002 90 ntBASIC1.76□□□□□ -2.13
PRPF40AO75400 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.76□□□□□ -2.13
PRPF40AO75400 MIR1257-201ENST00000408490 117 ntBASIC1.76□□□□□ -2.13
PRPF40AO75400 Y_RNA.601-201ENST00000410500 113 ntBASIC1.76□□□□□ -2.13
PRPF40AO75400 SNORD83.1-201ENST00000411362 77 ntBASIC1.76□□□□□ -2.13
PRPF40AO75400 Y_RNA.659-201ENST00000515994 113 ntBASIC1.76□□□□□ -2.13
PRPF40AO75400 SCARNA23-201ENST00000516060 130 ntBASIC1.76□□□□□ -2.13
PRPF40AO75400 Y_RNA.677-201ENST00000516401 85 ntBASIC1.76□□□□□ -2.13
PRPF40AO75400 RNU1-42P-201ENST00000364033 160 ntBASIC1.75□□□□□ -2.13
PRPF40AO75400 RNU6-934P-201ENST00000365154 107 ntBASIC1.75□□□□□ -2.13
PRPF40AO75400 snoU13.21-201ENST00000459368 105 ntBASIC1.75□□□□□ -2.13
PRPF40AO75400 RNU6-109P-201ENST00000516364 107 ntBASIC1.75□□□□□ -2.13
PRPF40AO75400 RNU6-184P-201ENST00000516514 107 ntBASIC1.75□□□□□ -2.13
PRPF40AO75400 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.75□□□□□ -2.13
PRPF40AO75400 U6.109-201ENST00000636749 87 ntBASIC1.75□□□□□ -2.13
PRPF40AO75400 SNORD45B-201ENST00000364617 72 ntBASIC1.74□□□□□ -2.13
PRPF40AO75400 RNY1P2-201ENST00000364820 117 ntBASIC1.74□□□□□ -2.13
PRPF40AO75400 SNORA67.5-201ENST00000391036 107 ntBASIC1.74□□□□□ -2.13
PRPF40AO75400 UBL5P1-201ENST00000507979 193 ntBASIC1.74□□□□□ -2.13
PRPF40AO75400 RNA5SP61-201ENST00000516453 100 ntBASIC1.74□□□□□ -2.13
PRPF40AO75400 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
PRPF40AO75400 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PRPF40AO75400 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PRPF40AO75400 RNA5SP327-201ENST00000362494 101 ntBASIC1.73□□□□□ -2.13
PRPF40AO75400 RNA5SP133-201ENST00000363368 119 ntBASIC1.73□□□□□ -2.13
PRPF40AO75400 SNORD38.1-201ENST00000363863 68 ntBASIC1.73□□□□□ -2.13
PRPF40AO75400 RNU6-53P-201ENST00000365367 106 ntBASIC1.73□□□□□ -2.13
PRPF40AO75400 SNORA25-201ENST00000384384 134 ntBASIC1.73□□□□□ -2.13
PRPF40AO75400 RNU7-185P-201ENST00000459215 60 ntBASIC1.73□□□□□ -2.13
PRPF40AO75400 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.73□□□□□ -2.13
PRPF40AO75400 MIR4771-2-201ENST00000577758 74 ntBASIC1.73□□□□□ -2.13
PRPF40AO75400 MIR4771-1-201ENST00000582617 74 ntBASIC1.73□□□□□ -2.13
PRPF40AO75400 Y_RNA.107-201ENST00000363190 121 ntBASIC1.72□□□□□ -2.13
PRPF40AO75400 MIR1323-201ENST00000408090 73 ntBASIC1.72□□□□□ -2.13
PRPF40AO75400 SNORA40.13-201ENST00000516379 120 ntBASIC1.72□□□□□ -2.13
PRPF40AO75400 AP001318.4-201ENST00000616637 121 ntBASIC1.72□□□□□ -2.13
PRPF40AO75400 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PRPF40AO75400 RNU1-36P-201ENST00000365130 165 ntBASIC1.71□□□□□ -2.14
PRPF40AO75400 SNORA72.6-201ENST00000384520 129 ntBASIC1.71□□□□□ -2.14
PRPF40AO75400 MTND5P40-201ENST00000559945 246 ntBASIC1.71□□□□□ -2.14
PRPF40AO75400 AC138749.4-201ENST00000563970 127 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 337.3 ms