Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 MIR548A1-201ENST00000385041 97 ntBASIC1.29□□□□□ -2.2
VPS4BO75351 RNU6-1165P-201ENST00000410119 107 ntBASIC1.29□□□□□ -2.2
VPS4BO75351 MIR18B-201ENST00000454574 71 ntBASIC1.29□□□□□ -2.2
VPS4BO75351 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.29□□□□□ -2.2
VPS4BO75351 uc_338.6-201ENST00000613544 171 ntBASIC1.29□□□□□ -2.2
VPS4BO75351 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
VPS4BO75351 SNORA32-201ENST00000384072 121 ntBASIC1.28□□□□□ -2.2
VPS4BO75351 MT-TF-201ENST00000387314 71 ntBASIC1.28□□□□□ -2.2
VPS4BO75351 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
VPS4BO75351 SNORD111-201ENST00000408139 94 ntBASIC1.28□□□□□ -2.2
VPS4BO75351 RPL39P34-201ENST00000477141 156 ntBASIC1.28□□□□□ -2.2
VPS4BO75351 MTND5P34-201ENST00000568888 325 ntBASIC1.28□□□□□ -2.2
VPS4BO75351 AC012676.2-201ENST00000619258 186 ntBASIC1.28□□□□□ -2.2
VPS4BO75351 Y_RNA.35-201ENST00000362601 101 ntBASIC1.27□□□□□ -2.21
VPS4BO75351 Y_RNA.330-201ENST00000365230 109 ntBASIC1.27□□□□□ -2.21
VPS4BO75351 RNU6-949P-201ENST00000384040 107 ntBASIC1.27□□□□□ -2.21
VPS4BO75351 MIR19B1-201ENST00000384829 87 ntBASIC1.27□□□□□ -2.21
VPS4BO75351 SNORD77B-201ENST00000391112 67 ntBASIC1.27□□□□□ -2.21
VPS4BO75351 RNA5SP237-201ENST00000410414 113 ntBASIC1.27□□□□□ -2.21
VPS4BO75351 MRPL35P3-201ENST00000421557 364 ntBASIC1.27□□□□□ -2.21
VPS4BO75351 AC002429.1-201ENST00000437672 148 ntBASIC1.27□□□□□ -2.21
VPS4BO75351 RNU6-1223P-201ENST00000517124 104 ntBASIC1.27□□□□□ -2.21
VPS4BO75351 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
VPS4BO75351 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.27□□□□□ -2.21
VPS4BO75351 Y_RNA.773-201ENST00000607168 90 ntBASIC1.27□□□□□ -2.21
VPS4BO75351 MIR6129-201ENST00000616087 109 ntBASIC1.27□□□□□ -2.21
VPS4BO75351 AL035470.1-201ENST00000622571 220 ntBASIC1.27□□□□□ -2.21
VPS4BO75351 MIR26B-201ENST00000362251 77 ntBASIC1.26□□□□□ -2.21
VPS4BO75351 Y_RNA.549-201ENST00000384657 102 ntBASIC1.26□□□□□ -2.21
VPS4BO75351 RNU6-1237P-201ENST00000384777 107 ntBASIC1.26□□□□□ -2.21
VPS4BO75351 MIR598-201ENST00000384868 97 ntBASIC1.26□□□□□ -2.21
VPS4BO75351 AC063976.4-201ENST00000421971 163 ntBASIC1.26□□□□□ -2.21
VPS4BO75351 AC008163.1-202ENST00000636004 2889 ntBASIC1.25□□□□□ -2.21
VPS4BO75351 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
VPS4BO75351 SNORD114-10-201ENST00000363409 72 ntBASIC1.25□□□□□ -2.21
VPS4BO75351 RNU6-1325P-201ENST00000364905 105 ntBASIC1.25□□□□□ -2.21
VPS4BO75351 RNU6-616P-201ENST00000384353 107 ntBASIC1.25□□□□□ -2.21
VPS4BO75351 SNORA2B-201ENST00000384583 137 ntBASIC1.25□□□□□ -2.21
VPS4BO75351 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.25□□□□□ -2.21
VPS4BO75351 AC096949.1-201ENST00000412047 152 ntBASIC1.25□□□□□ -2.21
VPS4BO75351 RNU7-137P-201ENST00000516788 62 ntBASIC1.25□□□□□ -2.21
VPS4BO75351 Y_RNA.709-201ENST00000516952 92 ntBASIC1.25□□□□□ -2.21
VPS4BO75351 FAM71BP1-201ENST00000604431 523 ntBASIC1.25□□□□□ -2.21
VPS4BO75351 MIR96-201ENST00000362288 78 ntBASIC1.24□□□□□ -2.21
VPS4BO75351 Y_RNA.85-201ENST00000363014 111 ntBASIC1.24□□□□□ -2.21
VPS4BO75351 SNORD20-201ENST00000384550 80 ntBASIC1.24□□□□□ -2.21
VPS4BO75351 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.24□□□□□ -2.21
VPS4BO75351 RPS29P1-201ENST00000465274 159 ntBASIC1.24□□□□□ -2.21
VPS4BO75351 AL162726.3-218ENST00000636401 95 ntBASIC1.24□□□□□ -2.21
VPS4BO75351 RNU6-363P-201ENST00000362895 105 ntBASIC1.23□□□□□ -2.21
VPS4BO75351 MIR520E-201ENST00000384867 87 ntBASIC1.23□□□□□ -2.21
VPS4BO75351 RNU6-412P-201ENST00000516434 106 ntBASIC1.23□□□□□ -2.21
VPS4BO75351 SNORD67.1-201ENST00000516618 108 ntBASIC1.23□□□□□ -2.21
VPS4BO75351 MIR151B-201ENST00000584249 96 ntBASIC1.23□□□□□ -2.21
VPS4BO75351 RNU6-94P-201ENST00000607728 107 ntBASIC1.23□□□□□ -2.21
VPS4BO75351 PVT1_3.1-201ENST00000620853 95 ntBASIC1.23□□□□□ -2.21
VPS4BO75351 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS4BO75351 MIR1255B1-201ENST00000636325 63 ntBASIC1.23□□□□□ -2.21
VPS4BO75351 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
VPS4BO75351 AL391516.1-201ENST00000554380 2449 ntBASIC1.23□□□□□ -2.21
VPS4BO75351 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
VPS4BO75351 AL589743.1-201ENST00000551932 2712 ntBASIC1.22□□□□□ -2.21
VPS4BO75351 RNU1-124P-201ENST00000363861 145 ntBASIC1.22□□□□□ -2.21
VPS4BO75351 RNU1-93P-201ENST00000364704 169 ntBASIC1.22□□□□□ -2.21
VPS4BO75351 SNORD115-35-201ENST00000365122 82 ntBASIC1.22□□□□□ -2.21
VPS4BO75351 Y_RNA.323-201ENST00000365157 109 ntBASIC1.22□□□□□ -2.21
VPS4BO75351 RNU6-939P-201ENST00000384634 107 ntBASIC1.22□□□□□ -2.21
VPS4BO75351 MIR206-201ENST00000384872 86 ntBASIC1.22□□□□□ -2.21
VPS4BO75351 U8.15-201ENST00000390947 134 ntBASIC1.22□□□□□ -2.21
VPS4BO75351 RNY4P18-201ENST00000391107 89 ntBASIC1.22□□□□□ -2.21
VPS4BO75351 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.22□□□□□ -2.21
VPS4BO75351 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS4BO75351 snoU13.21-201ENST00000459368 105 ntBASIC1.22□□□□□ -2.21
VPS4BO75351 RNU6-919P-201ENST00000516731 104 ntBASIC1.22□□□□□ -2.21
VPS4BO75351 AC019288.1-201ENST00000557918 224 ntBASIC1.22□□□□□ -2.21
VPS4BO75351 AC023827.1-201ENST00000569247 97 ntBASIC1.22□□□□□ -2.21
VPS4BO75351 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.22□□□□□ -2.21
VPS4BO75351 MIR6788-201ENST00000618842 66 ntBASIC1.22□□□□□ -2.21
VPS4BO75351 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS4BO75351 RNU6-369P-201ENST00000362515 102 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 SNORD114-27-201ENST00000363766 70 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 Y_RNA.309-201ENST00000365046 111 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 RNU6-447P-201ENST00000410293 104 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 RNU6-1118P-201ENST00000410382 104 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 MIR1912-201ENST00000410389 80 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 RNU6-1076P-201ENST00000410397 104 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 RNU6-355P-201ENST00000410427 104 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 RNU6-791P-201ENST00000410467 104 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 RNU6-705P-201ENST00000410601 104 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 RNU6-1100P-201ENST00000410691 104 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 RNU6-860P-201ENST00000410860 104 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 RNU6-1217P-201ENST00000411276 104 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 RNU6-785P-201ENST00000411324 104 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 RNU7-2P-201ENST00000516096 62 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 U6.90-201ENST00000614007 104 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 U6.70-201ENST00000620287 104 ntBASIC1.21□□□□□ -2.22
VPS4BO75351 RNU6-934P-201ENST00000365154 107 ntBASIC1.2□□□□□ -2.22
VPS4BO75351 SNORA40.6-201ENST00000391153 128 ntBASIC1.2□□□□□ -2.22
VPS4BO75351 AL353813.1-201ENST00000440700 253 ntBASIC1.2□□□□□ -2.22
VPS4BO75351 AC068339.1-201ENST00000526965 141 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms