Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.26□□□□□ -2.21
CNOT3O75175 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.25□□□□□ -2.21
CNOT3O75175 MIR26B-201ENST00000362251 77 ntBASIC1.25□□□□□ -2.21
CNOT3O75175 snoU13.2-201ENST00000459201 104 ntBASIC1.25□□□□□ -2.21
CNOT3O75175 RNU6-521P-201ENST00000516663 105 ntBASIC1.25□□□□□ -2.21
CNOT3O75175 AC141846.1-201ENST00000568348 142 ntBASIC1.25□□□□□ -2.21
CNOT3O75175 MIR3613-201ENST00000579844 87 ntBASIC1.25□□□□□ -2.21
CNOT3O75175 MIR3660-201ENST00000584845 100 ntBASIC1.25□□□□□ -2.21
CNOT3O75175 AL662814.1-201ENST00000617364 121 ntBASIC1.25□□□□□ -2.21
CNOT3O75175 MIR337-201ENST00000362281 93 ntBASIC1.24□□□□□ -2.21
CNOT3O75175 RNU6-363P-201ENST00000362895 105 ntBASIC1.24□□□□□ -2.21
CNOT3O75175 RNU6-32P-201ENST00000383948 107 ntBASIC1.24□□□□□ -2.21
CNOT3O75175 RNU6-13P-201ENST00000384248 107 ntBASIC1.24□□□□□ -2.21
CNOT3O75175 RNU6-1113P-201ENST00000384348 107 ntBASIC1.24□□□□□ -2.21
CNOT3O75175 RNU6-12P-201ENST00000384604 107 ntBASIC1.24□□□□□ -2.21
CNOT3O75175 RNU6-41P-201ENST00000384741 107 ntBASIC1.24□□□□□ -2.21
CNOT3O75175 MIR206-201ENST00000384872 86 ntBASIC1.24□□□□□ -2.21
CNOT3O75175 MIR605-201ENST00000385078 83 ntBASIC1.24□□□□□ -2.21
CNOT3O75175 SNORA19.1-201ENST00000410656 129 ntBASIC1.24□□□□□ -2.21
CNOT3O75175 RNU6-94P-201ENST00000607728 107 ntBASIC1.24□□□□□ -2.21
CNOT3O75175 MIR6740-201ENST00000618268 113 ntBASIC1.24□□□□□ -2.21
CNOT3O75175 AL512310.12-203ENST00000640543 90 ntBASIC1.24□□□□□ -2.21
CNOT3O75175 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CNOT3O75175 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CNOT3O75175 Y_RNA.448-201ENST00000384185 108 ntBASIC1.23□□□□□ -2.21
CNOT3O75175 Y_RNA.495-201ENST00000384435 112 ntBASIC1.23□□□□□ -2.21
CNOT3O75175 SNORA2B-201ENST00000384583 137 ntBASIC1.23□□□□□ -2.21
CNOT3O75175 MT-TN-201ENST00000387400 73 ntBASIC1.23□□□□□ -2.21
CNOT3O75175 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
CNOT3O75175 RNU7-2P-201ENST00000516096 62 ntBASIC1.23□□□□□ -2.21
CNOT3O75175 RNU11-2P-201ENST00000516898 142 ntBASIC1.23□□□□□ -2.21
CNOT3O75175 RNU6-537P-201ENST00000517277 103 ntBASIC1.23□□□□□ -2.21
CNOT3O75175 AP003716.2-201ENST00000528260 108 ntBASIC1.23□□□□□ -2.21
CNOT3O75175 RNU6-766P-201ENST00000362478 107 ntBASIC1.22□□□□□ -2.21
CNOT3O75175 RNU4-36P-201ENST00000364294 144 ntBASIC1.22□□□□□ -2.21
CNOT3O75175 RNU6-865P-201ENST00000364772 107 ntBASIC1.22□□□□□ -2.21
CNOT3O75175 RNY1P13-201ENST00000365030 105 ntBASIC1.22□□□□□ -2.21
CNOT3O75175 Y_RNA.360-201ENST00000365512 102 ntBASIC1.22□□□□□ -2.21
CNOT3O75175 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.22□□□□□ -2.21
CNOT3O75175 RNU6-1165P-201ENST00000410119 107 ntBASIC1.22□□□□□ -2.21
CNOT3O75175 RNU6-168P-201ENST00000516189 101 ntBASIC1.22□□□□□ -2.21
CNOT3O75175 DEFB131E-201ENST00000532329 154 ntBASIC1.22□□□□□ -2.21
CNOT3O75175 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
CNOT3O75175 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
CNOT3O75175 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
CNOT3O75175 SNORD115-35-201ENST00000365122 82 ntBASIC1.21□□□□□ -2.22
CNOT3O75175 Y_RNA.328-201ENST00000365208 113 ntBASIC1.21□□□□□ -2.22
CNOT3O75175 RNU6-679P-201ENST00000391003 106 ntBASIC1.21□□□□□ -2.22
CNOT3O75175 RNU6-613P-201ENST00000410412 108 ntBASIC1.21□□□□□ -2.22
CNOT3O75175 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.21□□□□□ -2.22
CNOT3O75175 RNU7-137P-201ENST00000516788 62 ntBASIC1.21□□□□□ -2.22
CNOT3O75175 AC133485.1-201ENST00000567176 124 ntBASIC1.21□□□□□ -2.22
CNOT3O75175 SEPT14P17-201ENST00000617978 177 ntBASIC1.21□□□□□ -2.22
CNOT3O75175 SNORD114-10-201ENST00000363409 72 ntBASIC1.2□□□□□ -2.22
CNOT3O75175 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
CNOT3O75175 MIR222-201ENST00000384992 110 ntBASIC1.2□□□□□ -2.22
CNOT3O75175 MIR590-201ENST00000385008 97 ntBASIC1.2□□□□□ -2.22
CNOT3O75175 RNU6-910P-201ENST00000390844 107 ntBASIC1.2□□□□□ -2.22
CNOT3O75175 RNU6-1321P-201ENST00000390905 107 ntBASIC1.2□□□□□ -2.22
CNOT3O75175 SNORA75.2-201ENST00000391138 150 ntBASIC1.2□□□□□ -2.22
CNOT3O75175 SNORA75.3-201ENST00000391231 150 ntBASIC1.2□□□□□ -2.22
CNOT3O75175 MIR1287-201ENST00000408492 90 ntBASIC1.2□□□□□ -2.22
CNOT3O75175 RNA5SP89-201ENST00000410300 108 ntBASIC1.2□□□□□ -2.22
CNOT3O75175 RNU6-1054P-201ENST00000411293 104 ntBASIC1.2□□□□□ -2.22
CNOT3O75175 MRPL35P3-201ENST00000421557 364 ntBASIC1.2□□□□□ -2.22
CNOT3O75175 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.2□□□□□ -2.22
CNOT3O75175 AC023827.1-201ENST00000569247 97 ntBASIC1.2□□□□□ -2.22
CNOT3O75175 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.2□□□□□ -2.22
CNOT3O75175 SNORA4-201ENST00000584302 138 ntBASIC1.2□□□□□ -2.22
CNOT3O75175 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
CNOT3O75175 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CNOT3O75175 RNY3P2-201ENST00000362918 102 ntBASIC1.19□□□□□ -2.22
CNOT3O75175 RNU6-949P-201ENST00000384040 107 ntBASIC1.19□□□□□ -2.22
CNOT3O75175 MIR577-201ENST00000385196 96 ntBASIC1.19□□□□□ -2.22
CNOT3O75175 MIR1276-201ENST00000408707 83 ntBASIC1.19□□□□□ -2.22
CNOT3O75175 RNU6-109P-201ENST00000516364 107 ntBASIC1.19□□□□□ -2.22
CNOT3O75175 Y_RNA.677-201ENST00000516401 85 ntBASIC1.19□□□□□ -2.22
CNOT3O75175 RNU6-184P-201ENST00000516514 107 ntBASIC1.19□□□□□ -2.22
CNOT3O75175 MIR4694-201ENST00000578534 80 ntBASIC1.19□□□□□ -2.22
CNOT3O75175 uc_338.6-201ENST00000613544 171 ntBASIC1.19□□□□□ -2.22
CNOT3O75175 MIR377-201ENST00000362145 69 ntBASIC1.18□□□□□ -2.22
CNOT3O75175 RNU6-1307P-201ENST00000391012 103 ntBASIC1.18□□□□□ -2.22
CNOT3O75175 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
CNOT3O75175 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
CNOT3O75175 Y_RNA.659-201ENST00000515994 113 ntBASIC1.18□□□□□ -2.22
CNOT3O75175 MIR6078-201ENST00000611069 100 ntBASIC1.18□□□□□ -2.22
CNOT3O75175 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.18□□□□□ -2.22
CNOT3O75175 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.18□□□□□ -2.22
CNOT3O75175 MIR30D-201ENST00000362283 70 ntBASIC1.17□□□□□ -2.22
CNOT3O75175 RNU6-832P-201ENST00000363319 107 ntBASIC1.17□□□□□ -2.22
CNOT3O75175 RNU6-1099P-201ENST00000363533 107 ntBASIC1.17□□□□□ -2.22
CNOT3O75175 Y_RNA.363-201ENST00000365529 113 ntBASIC1.17□□□□□ -2.22
CNOT3O75175 Y_RNA.544-201ENST00000384650 113 ntBASIC1.17□□□□□ -2.22
CNOT3O75175 MIR34C-201ENST00000384831 77 ntBASIC1.17□□□□□ -2.22
CNOT3O75175 MIR499A-201ENST00000384903 122 ntBASIC1.17□□□□□ -2.22
CNOT3O75175 MIR563-201ENST00000385080 79 ntBASIC1.17□□□□□ -2.22
CNOT3O75175 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
CNOT3O75175 SNORD83.1-201ENST00000411362 77 ntBASIC1.17□□□□□ -2.22
CNOT3O75175 AL353813.1-201ENST00000440700 253 ntBASIC1.17□□□□□ -2.22
CNOT3O75175 RNU7-48P-201ENST00000458875 63 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms