Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 SNORD115-17-201ENST00000364612 82 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 Y_RNA.309-201ENST00000365046 111 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 RNU6-554P-201ENST00000410466 106 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 RNU6-1190P-201ENST00000410811 104 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 RPS23P4-201ENST00000487908 423 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 CYP3A52P-201ENST00000563326 91 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 MIR3192-201ENST00000584920 77 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 SEPT14P17-201ENST00000617978 177 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 MIR6740-201ENST00000618268 113 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 MIR6717-201ENST00000622747 73 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 Z97988.1-201ENST00000637697 135 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 SNORA18-201ENST00000384416 132 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 SNORA2B-201ENST00000384583 137 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 MIR206-201ENST00000384872 86 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 MIR548D2-201ENST00000384955 97 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 MIR577-201ENST00000385196 96 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 MIR1302-7-201ENST00000408841 72 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 RNA5SP89-201ENST00000410300 108 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 AL031737.1-201ENST00000450125 223 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 snoU13.21-201ENST00000459368 105 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 RNU7-35P-201ENST00000517174 62 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 MIR3973-201ENST00000579824 107 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 MIR1255B1-201ENST00000636325 63 ntBASIC1.05□□□□□ -2.24
CACNA1FO60840 Y_RNA.155-201ENST00000363632 101 ntBASIC1.04□□□□□ -2.24
CACNA1FO60840 RNU4-67P-201ENST00000364569 141 ntBASIC1.04□□□□□ -2.24
CACNA1FO60840 RNU6-147P-201ENST00000383983 107 ntBASIC1.04□□□□□ -2.24
CACNA1FO60840 Y_RNA.430-201ENST00000384081 110 ntBASIC1.04□□□□□ -2.24
CACNA1FO60840 RNU6-439P-201ENST00000384188 106 ntBASIC1.04□□□□□ -2.24
CACNA1FO60840 SNORA51.10-201ENST00000384418 136 ntBASIC1.04□□□□□ -2.24
CACNA1FO60840 RNU6-1018P-201ENST00000516577 106 ntBASIC1.04□□□□□ -2.24
CACNA1FO60840 MIR4698-201ENST00000577795 80 ntBASIC1.04□□□□□ -2.24
CACNA1FO60840 MIR5009-201ENST00000578736 100 ntBASIC1.04□□□□□ -2.24
CACNA1FO60840 MIR548AO-201ENST00000579992 96 ntBASIC1.04□□□□□ -2.24
CACNA1FO60840 AP000753.3-201ENST00000604083 169 ntBASIC1.04□□□□□ -2.24
CACNA1FO60840 MIR8063-201ENST00000621930 81 ntBASIC1.04□□□□□ -2.24
CACNA1FO60840 U8.6-201ENST00000364939 135 ntBASIC1.03□□□□□ -2.24
CACNA1FO60840 RNU6-913P-201ENST00000390913 95 ntBASIC1.03□□□□□ -2.24
CACNA1FO60840 SNORD67.1-201ENST00000516618 108 ntBASIC1.03□□□□□ -2.24
CACNA1FO60840 SNORA77B-201ENST00000578179 125 ntBASIC1.03□□□□□ -2.24
CACNA1FO60840 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
CACNA1FO60840 RNU6-363P-201ENST00000362895 105 ntBASIC1.03□□□□□ -2.25
CACNA1FO60840 RNU4-36P-201ENST00000364294 144 ntBASIC1.03□□□□□ -2.25
CACNA1FO60840 RNU4-69P-201ENST00000410677 143 ntBASIC1.03□□□□□ -2.25
CACNA1FO60840 RNU6-537P-201ENST00000517277 103 ntBASIC1.03□□□□□ -2.25
CACNA1FO60840 AL512310.8-201ENST00000550183 120 ntBASIC1.03□□□□□ -2.25
CACNA1FO60840 uc_338.28-201ENST00000612082 187 ntBASIC1.03□□□□□ -2.25
CACNA1FO60840 MIR26B-201ENST00000362251 77 ntBASIC1.02□□□□□ -2.25
CACNA1FO60840 SNORD115-2-201ENST00000362842 82 ntBASIC1.02□□□□□ -2.25
CACNA1FO60840 RNA5SP48-201ENST00000363969 126 ntBASIC1.02□□□□□ -2.25
CACNA1FO60840 SNORD115-20-201ENST00000365099 82 ntBASIC1.02□□□□□ -2.25
CACNA1FO60840 Y_RNA.330-201ENST00000365230 109 ntBASIC1.02□□□□□ -2.25
CACNA1FO60840 SNORA19.1-201ENST00000410656 129 ntBASIC1.02□□□□□ -2.25
CACNA1FO60840 AC048334.1-201ENST00000477975 159 ntBASIC1.02□□□□□ -2.25
CACNA1FO60840 RNU6-205P-201ENST00000390858 107 ntBASIC1.01□□□□□ -2.25
CACNA1FO60840 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.01□□□□□ -2.25
CACNA1FO60840 AC244023.1-201ENST00000426884 112 ntBASIC1.01□□□□□ -2.25
CACNA1FO60840 RNU7-53P-201ENST00000516705 60 ntBASIC1.01□□□□□ -2.25
CACNA1FO60840 DEFB131E-201ENST00000532329 154 ntBASIC1.01□□□□□ -2.25
CACNA1FO60840 AC242498.1-201ENST00000604134 111 ntBASIC1.01□□□□□ -2.25
CACNA1FO60840 AP001318.4-201ENST00000616637 121 ntBASIC1.01□□□□□ -2.25
CACNA1FO60840 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.01□□□□□ -2.25
CACNA1FO60840 RNU6-1099P-201ENST00000363533 107 ntBASIC1.01□□□□□ -2.25
CACNA1FO60840 MIR618-201ENST00000385287 98 ntBASIC1.01□□□□□ -2.25
CACNA1FO60840 MT-TN-201ENST00000387400 73 ntBASIC1.01□□□□□ -2.25
CACNA1FO60840 RNU6-733P-201ENST00000410759 104 ntBASIC1.01□□□□□ -2.25
CACNA1FO60840 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.01□□□□□ -2.25
CACNA1FO60840 RNU7-61P-201ENST00000515897 61 ntBASIC1.01□□□□□ -2.25
CACNA1FO60840 RNA5SP436-201ENST00000516020 115 ntBASIC1.01□□□□□ -2.25
CACNA1FO60840 SNORA40.13-201ENST00000516379 120 ntBASIC1.01□□□□□ -2.25
CACNA1FO60840 AL035470.1-201ENST00000622571 220 ntBASIC1.01□□□□□ -2.25
CACNA1FO60840 SNORA22.1-201ENST00000362701 134 ntBASIC1□□□□□ -2.25
CACNA1FO60840 RNU6-755P-201ENST00000364400 103 ntBASIC1□□□□□ -2.25
CACNA1FO60840 SNORD77B-201ENST00000391112 67 ntBASIC1□□□□□ -2.25
CACNA1FO60840 RNU7-6P-201ENST00000516845 62 ntBASIC1□□□□□ -2.25
CACNA1FO60840 RN7SKP88-201ENST00000516847 250 ntBASIC1□□□□□ -2.25
CACNA1FO60840 Y_RNA.773-201ENST00000607168 90 ntBASIC1□□□□□ -2.25
CACNA1FO60840 7SK.8-201ENST00000612110 250 ntBASIC1□□□□□ -2.25
CACNA1FO60840 AL442128.1-201ENST00000615151 90 ntBASIC1□□□□□ -2.25
CACNA1FO60840 7SK.11-201ENST00000615477 250 ntBASIC1□□□□□ -2.25
CACNA1FO60840 7SK.13-201ENST00000622040 250 ntBASIC1□□□□□ -2.25
CACNA1FO60840 MIR2052-201ENST00000636055 55 ntBASIC1□□□□□ -2.25
CACNA1FO60840 SNORD114-10-201ENST00000363409 72 ntBASIC0.99□□□□□ -2.25
CACNA1FO60840 SNORD115-35-201ENST00000365122 82 ntBASIC0.99□□□□□ -2.25
CACNA1FO60840 RNU6-949P-201ENST00000384040 107 ntBASIC0.99□□□□□ -2.25
CACNA1FO60840 RNU6-910P-201ENST00000390844 107 ntBASIC0.99□□□□□ -2.25
CACNA1FO60840 RNA5SP404-201ENST00000517118 132 ntBASIC0.99□□□□□ -2.25
CACNA1FO60840 MIR3664-201ENST00000579074 99 ntBASIC0.99□□□□□ -2.25
CACNA1FO60840 MIR3613-201ENST00000579844 87 ntBASIC0.99□□□□□ -2.25
CACNA1FO60840 AL512310.12-203ENST00000640543 90 ntBASIC0.99□□□□□ -2.25
CACNA1FO60840 RNU1-124P-201ENST00000363861 145 ntBASIC0.99□□□□□ -2.25
CACNA1FO60840 RNU6-1131P-201ENST00000364955 107 ntBASIC0.99□□□□□ -2.25
CACNA1FO60840 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.99□□□□□ -2.25
CACNA1FO60840 MRPL35P3-201ENST00000421557 364 ntBASIC0.99□□□□□ -2.25
CACNA1FO60840 BX276092.1-201ENST00000427368 251 ntBASIC0.99□□□□□ -2.25
CACNA1FO60840 RNU7-79P-201ENST00000516082 62 ntBASIC0.99□□□□□ -2.25
CACNA1FO60840 RNU6-351P-201ENST00000516097 100 ntBASIC0.99□□□□□ -2.25
CACNA1FO60840 MIR548AE2-201ENST00000583456 67 ntBASIC0.99□□□□□ -2.25
CACNA1FO60840 AC105081.1-201ENST00000617727 106 ntBASIC0.99□□□□□ -2.25
CACNA1FO60840 RNU6-1298P-201ENST00000362456 101 ntBASIC0.98□□□□□ -2.25
CACNA1FO60840 RNU6-409P-201ENST00000384114 104 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms