Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.01□□□□□ -2.57
KDELR3O43731 RNU6-976P-201ENST00000516086 111 ntBASIC-1.01□□□□□ -2.57
KDELR3O43731 AL359881.1-201ENST00000602916 267 ntBASIC-1.01□□□□□ -2.57
KDELR3O43731 snoU18.1-201ENST00000629629 71 ntBASIC-1.01□□□□□ -2.57
KDELR3O43731 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.02□□□□□ -2.57
KDELR3O43731 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.02□□□□□ -2.57
KDELR3O43731 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.02□□□□□ -2.57
KDELR3O43731 SNORA32-201ENST00000384072 121 ntBASIC-1.02□□□□□ -2.57
KDELR3O43731 SNORD115-46-201ENST00000390982 71 ntBASIC-1.02□□□□□ -2.57
KDELR3O43731 RNU7-152P-201ENST00000458982 64 ntBASIC-1.02□□□□□ -2.57
KDELR3O43731 RNU6-138P-201ENST00000515952 107 ntBASIC-1.02□□□□□ -2.57
KDELR3O43731 SCARNA17-201ENST00000516183 144 ntBASIC-1.02□□□□□ -2.57
KDELR3O43731 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
KDELR3O43731 AC084781.2-201ENST00000615568 161 ntBASIC-1.02□□□□□ -2.57
KDELR3O43731 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.03□□□□□ -2.57
KDELR3O43731 MIR539-201ENST00000365690 78 ntBASIC-1.03□□□□□ -2.57
KDELR3O43731 MIR9-2-201ENST00000384838 87 ntBASIC-1.03□□□□□ -2.57
KDELR3O43731 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
KDELR3O43731 AL500527.2-201ENST00000454105 95 ntBASIC-1.03□□□□□ -2.57
KDELR3O43731 RNU7-113P-201ENST00000459273 62 ntBASIC-1.03□□□□□ -2.57
KDELR3O43731 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.03□□□□□ -2.57
KDELR3O43731 RNU7-13P-201ENST00000516413 62 ntBASIC-1.03□□□□□ -2.57
KDELR3O43731 SNORA27.4-201ENST00000516650 95 ntBASIC-1.03□□□□□ -2.57
KDELR3O43731 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.04□□□□□ -2.58
KDELR3O43731 SNORD114-29-201ENST00000364819 70 ntBASIC-1.04□□□□□ -2.58
KDELR3O43731 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.04□□□□□ -2.58
KDELR3O43731 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.04□□□□□ -2.58
KDELR3O43731 MT-TL1-201ENST00000386347 75 ntBASIC-1.04□□□□□ -2.58
KDELR3O43731 MT-TT-201ENST00000387460 66 ntBASIC-1.04□□□□□ -2.58
KDELR3O43731 AL445193.1-201ENST00000441183 141 ntBASIC-1.04□□□□□ -2.58
KDELR3O43731 SPINT5P-201ENST00000448174 155 ntBASIC-1.04□□□□□ -2.58
KDELR3O43731 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.04□□□□□ -2.58
KDELR3O43731 MTND5P40-201ENST00000559945 246 ntBASIC-1.04□□□□□ -2.58
KDELR3O43731 YWHAEP2-201ENST00000580066 112 ntBASIC-1.04□□□□□ -2.58
KDELR3O43731 MIR548AE1-201ENST00000583292 70 ntBASIC-1.04□□□□□ -2.58
KDELR3O43731 AC090574.1-201ENST00000623186 233 ntBASIC-1.04□□□□□ -2.58
KDELR3O43731 SNORD114-10-201ENST00000363409 72 ntBASIC-1.05□□□□□ -2.58
KDELR3O43731 AL606845.1-201ENST00000404881 255 ntBASIC-1.05□□□□□ -2.58
KDELR3O43731 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.05□□□□□ -2.58
KDELR3O43731 AC006504.6-201ENST00000590142 199 ntBASIC-1.05□□□□□ -2.58
KDELR3O43731 AC069503.3-201ENST00000618674 145 ntBASIC-1.05□□□□□ -2.58
KDELR3O43731 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.06□□□□□ -2.58
KDELR3O43731 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.06□□□□□ -2.58
KDELR3O43731 MIR1302-11-201ENST00000408051 138 ntBASIC-1.06□□□□□ -2.58
KDELR3O43731 MIR1302-9-201ENST00000408365 138 ntBASIC-1.06□□□□□ -2.58
KDELR3O43731 MIR1302-10-201ENST00000408734 138 ntBASIC-1.06□□□□□ -2.58
KDELR3O43731 AC093423.1-201ENST00000440817 142 ntBASIC-1.06□□□□□ -2.58
KDELR3O43731 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.06□□□□□ -2.58
KDELR3O43731 RNA5SP33-201ENST00000516687 98 ntBASIC-1.06□□□□□ -2.58
KDELR3O43731 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.06□□□□□ -2.58
KDELR3O43731 MIR548AG2-201ENST00000581228 64 ntBASIC-1.06□□□□□ -2.58
KDELR3O43731 MIR1302-2-201ENST00000607096 138 ntBASIC-1.06□□□□□ -2.58
KDELR3O43731 SNORD114-25-201ENST00000363742 72 ntBASIC-1.07□□□□□ -2.58
KDELR3O43731 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.07□□□□□ -2.58
KDELR3O43731 SNORD56B-201ENST00000384713 71 ntBASIC-1.07□□□□□ -2.58
KDELR3O43731 MIR616-201ENST00000385293 97 ntBASIC-1.07□□□□□ -2.58
KDELR3O43731 RNA5SP144-201ENST00000410846 116 ntBASIC-1.07□□□□□ -2.58
KDELR3O43731 FGF7P6-202ENST00000451282 293 ntBASIC-1.07□□□□□ -2.58
KDELR3O43731 SCARNA15-202ENST00000516881 127 ntBASIC-1.07□□□□□ -2.58
KDELR3O43731 IGKV1-22-201ENST00000524313 326 ntBASIC-1.07□□□□□ -2.58
KDELR3O43731 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.08□□□□□ -2.58
KDELR3O43731 RNU6-211P-201ENST00000384047 107 ntBASIC-1.08□□□□□ -2.58
KDELR3O43731 MIR519E-201ENST00000385075 84 ntBASIC-1.08□□□□□ -2.58
KDELR3O43731 MIR204-201ENST00000385200 110 ntBASIC-1.08□□□□□ -2.58
KDELR3O43731 RNU7-195P-201ENST00000458793 62 ntBASIC-1.08□□□□□ -2.58
KDELR3O43731 MIR4500-201ENST00000579472 76 ntBASIC-1.08□□□□□ -2.58
KDELR3O43731 MIR1302-1-201ENST00000637932 143 ntBASIC-1.08□□□□□ -2.58
KDELR3O43731 MIR6086-201ENST00000638065 55 ntBASIC-1.08□□□□□ -2.58
KDELR3O43731 RNY1P6-201ENST00000384193 109 ntBASIC-1.09□□□□□ -2.58
KDELR3O43731 RNU6-154P-201ENST00000384306 106 ntBASIC-1.09□□□□□ -2.58
KDELR3O43731 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.09□□□□□ -2.58
KDELR3O43731 MIR4280-201ENST00000582178 76 ntBASIC-1.09□□□□□ -2.58
KDELR3O43731 UBE2WP1-201ENST00000362030 340 ntBASIC-1.1□□□□□ -2.59
KDELR3O43731 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.1□□□□□ -2.59
KDELR3O43731 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.1□□□□□ -2.59
KDELR3O43731 SNORD115-2-201ENST00000362842 82 ntBASIC-1.1□□□□□ -2.59
KDELR3O43731 SNORD115-20-201ENST00000365099 82 ntBASIC-1.1□□□□□ -2.59
KDELR3O43731 SNORD116-4-201ENST00000384733 96 ntBASIC-1.1□□□□□ -2.59
KDELR3O43731 MIR519A1-201ENST00000385257 85 ntBASIC-1.1□□□□□ -2.59
KDELR3O43731 AL589823.1-201ENST00000429577 183 ntBASIC-1.1□□□□□ -2.59
KDELR3O43731 AC098614.3-201ENST00000438957 440 ntBASIC-1.1□□□□□ -2.59
KDELR3O43731 AC082651.2-201ENST00000496833 166 ntBASIC-1.1□□□□□ -2.59
KDELR3O43731 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.1□□□□□ -2.59
KDELR3O43731 RNU6-881P-201ENST00000516813 102 ntBASIC-1.1□□□□□ -2.59
KDELR3O43731 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.1□□□□□ -2.59
KDELR3O43731 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.1□□□□□ -2.59
KDELR3O43731 MIR548AE2-201ENST00000583456 67 ntBASIC-1.1□□□□□ -2.59
KDELR3O43731 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.11□□□□□ -2.59
KDELR3O43731 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.11□□□□□ -2.59
KDELR3O43731 RNU6-728P-201ENST00000365375 104 ntBASIC-1.11□□□□□ -2.59
KDELR3O43731 RNU6-524P-201ENST00000384270 107 ntBASIC-1.11□□□□□ -2.59
KDELR3O43731 MTATP6P23-201ENST00000440153 476 ntBASIC-1.11□□□□□ -2.59
KDELR3O43731 AC021146.6-201ENST00000514659 117 ntBASIC-1.11□□□□□ -2.59
KDELR3O43731 RNU6-277P-201ENST00000516272 106 ntBASIC-1.11□□□□□ -2.59
KDELR3O43731 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.11□□□□□ -2.59
KDELR3O43731 RNU6-453P-201ENST00000516819 85 ntBASIC-1.11□□□□□ -2.59
KDELR3O43731 MIR4499-201ENST00000584834 69 ntBASIC-1.11□□□□□ -2.59
KDELR3O43731 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.11□□□□□ -2.59
KDELR3O43731 RNU6-900P-201ENST00000384498 102 ntBASIC-1.12□□□□□ -2.59
KDELR3O43731 RNU6-901P-201ENST00000384593 106 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms