Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 MIR608-201ENST00000384820 100 ntBASIC1.05□□□□□ -2.24
PRPF3O43395 Y_RNA.586-201ENST00000391146 98 ntBASIC1.05□□□□□ -2.24
PRPF3O43395 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.05□□□□□ -2.24
PRPF3O43395 RNU7-79P-201ENST00000516082 62 ntBASIC1.05□□□□□ -2.24
PRPF3O43395 RNU7-35P-201ENST00000517174 62 ntBASIC1.05□□□□□ -2.24
PRPF3O43395 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.05□□□□□ -2.24
PRPF3O43395 RNU6-235P-201ENST00000362644 107 ntBASIC1.04□□□□□ -2.24
PRPF3O43395 RNY1P13-201ENST00000365030 105 ntBASIC1.04□□□□□ -2.24
PRPF3O43395 RNU6-1335P-201ENST00000365426 107 ntBASIC1.04□□□□□ -2.24
PRPF3O43395 MIR539-201ENST00000365690 78 ntBASIC1.04□□□□□ -2.24
PRPF3O43395 RNU6-949P-201ENST00000384040 107 ntBASIC1.04□□□□□ -2.24
PRPF3O43395 MIR938-201ENST00000401216 83 ntBASIC1.04□□□□□ -2.24
PRPF3O43395 AC022523.2-201ENST00000561045 150 ntBASIC1.04□□□□□ -2.24
PRPF3O43395 AC211469.2-201ENST00000605461 205 ntBASIC1.04□□□□□ -2.24
PRPF3O43395 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.04□□□□□ -2.24
PRPF3O43395 MIR373-201ENST00000362273 69 ntBASIC1.03□□□□□ -2.24
PRPF3O43395 RNU4-45P-201ENST00000365469 141 ntBASIC1.03□□□□□ -2.24
PRPF3O43395 RNU6-110P-201ENST00000384508 104 ntBASIC1.03□□□□□ -2.24
PRPF3O43395 MIR520F-201ENST00000384824 87 ntBASIC1.03□□□□□ -2.24
PRPF3O43395 SNORD93-201ENST00000408813 74 ntBASIC1.03□□□□□ -2.24
PRPF3O43395 RNU4-69P-201ENST00000410677 143 ntBASIC1.03□□□□□ -2.24
PRPF3O43395 RNU6-1211P-201ENST00000459179 105 ntBASIC1.03□□□□□ -2.24
PRPF3O43395 AL353765.1-201ENST00000605514 183 ntBASIC1.03□□□□□ -2.24
PRPF3O43395 MIR6857-201ENST00000613267 93 ntBASIC1.03□□□□□ -2.24
PRPF3O43395 RNU6-704P-201ENST00000364162 103 ntBASIC1.02□□□□□ -2.25
PRPF3O43395 MIR125B2-201ENST00000385128 89 ntBASIC1.02□□□□□ -2.25
PRPF3O43395 U8.15-201ENST00000390947 134 ntBASIC1.02□□□□□ -2.25
PRPF3O43395 MIR1263-201ENST00000408324 86 ntBASIC1.02□□□□□ -2.25
PRPF3O43395 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
PRPF3O43395 MIR4804-201ENST00000581683 73 ntBASIC1.02□□□□□ -2.25
PRPF3O43395 AL589743.1-201ENST00000551932 2712 ntBASIC1.02□□□□□ -2.25
PRPF3O43395 RNU6-1104P-201ENST00000384723 104 ntBASIC1.01□□□□□ -2.25
PRPF3O43395 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.01□□□□□ -2.25
PRPF3O43395 RNA5SP136-201ENST00000410906 107 ntBASIC1.01□□□□□ -2.25
PRPF3O43395 Y_RNA.617-201ENST00000410920 90 ntBASIC1.01□□□□□ -2.25
PRPF3O43395 RNU6-971P-201ENST00000516920 106 ntBASIC1.01□□□□□ -2.25
PRPF3O43395 RNU1-119P-201ENST00000391122 165 ntBASIC1□□□□□ -2.25
PRPF3O43395 RNU6-447P-201ENST00000410293 104 ntBASIC1□□□□□ -2.25
PRPF3O43395 RNU6-1118P-201ENST00000410382 104 ntBASIC1□□□□□ -2.25
PRPF3O43395 RNU6-1076P-201ENST00000410397 104 ntBASIC1□□□□□ -2.25
PRPF3O43395 RNU6-355P-201ENST00000410427 104 ntBASIC1□□□□□ -2.25
PRPF3O43395 RNU6-791P-201ENST00000410467 104 ntBASIC1□□□□□ -2.25
PRPF3O43395 RNU6-705P-201ENST00000410601 104 ntBASIC1□□□□□ -2.25
PRPF3O43395 RNU6-1100P-201ENST00000410691 104 ntBASIC1□□□□□ -2.25
PRPF3O43395 RNU6-860P-201ENST00000410860 104 ntBASIC1□□□□□ -2.25
PRPF3O43395 RNU6-1217P-201ENST00000411276 104 ntBASIC1□□□□□ -2.25
PRPF3O43395 RNU6-785P-201ENST00000411324 104 ntBASIC1□□□□□ -2.25
PRPF3O43395 SUMO1P3-201ENST00000439961 304 ntBASIC1□□□□□ -2.25
PRPF3O43395 RNU6-781P-201ENST00000516377 101 ntBASIC1□□□□□ -2.25
PRPF3O43395 MIR4653-201ENST00000585107 83 ntBASIC1□□□□□ -2.25
PRPF3O43395 FAM71BP1-201ENST00000604431 523 ntBASIC1□□□□□ -2.25
PRPF3O43395 U6.90-201ENST00000614007 104 ntBASIC1□□□□□ -2.25
PRPF3O43395 U6.70-201ENST00000620287 104 ntBASIC1□□□□□ -2.25
PRPF3O43395 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.99□□□□□ -2.25
PRPF3O43395 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
PRPF3O43395 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
PRPF3O43395 RNU6-364P-201ENST00000384387 107 ntBASIC0.99□□□□□ -2.25
PRPF3O43395 SNORD77B-201ENST00000391112 67 ntBASIC0.99□□□□□ -2.25
PRPF3O43395 RNU4-83P-201ENST00000410863 133 ntBASIC0.99□□□□□ -2.25
PRPF3O43395 RNU6-1061P-201ENST00000516530 99 ntBASIC0.99□□□□□ -2.25
PRPF3O43395 RNU7-156P-201ENST00000517214 74 ntBASIC0.99□□□□□ -2.25
PRPF3O43395 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.99□□□□□ -2.25
PRPF3O43395 MIR5000-201ENST00000577717 103 ntBASIC0.99□□□□□ -2.25
PRPF3O43395 SNORD92-201ENST00000585078 85 ntBASIC0.99□□□□□ -2.25
PRPF3O43395 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
PRPF3O43395 RNA5SP325-201ENST00000363756 130 ntBASIC0.98□□□□□ -2.25
PRPF3O43395 MIR520H-201ENST00000385126 88 ntBASIC0.98□□□□□ -2.25
PRPF3O43395 SNORD99-201ENST00000408612 74 ntBASIC0.98□□□□□ -2.25
PRPF3O43395 RNU7-56P-201ENST00000458744 62 ntBASIC0.98□□□□□ -2.25
PRPF3O43395 MIR4698-201ENST00000577795 80 ntBASIC0.98□□□□□ -2.25
PRPF3O43395 Y_RNA.213-201ENST00000364178 111 ntBASIC0.97□□□□□ -2.25
PRPF3O43395 Y_RNA.528-201ENST00000384575 108 ntBASIC0.97□□□□□ -2.25
PRPF3O43395 MIR759-201ENST00000390224 91 ntBASIC0.97□□□□□ -2.25
PRPF3O43395 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.97□□□□□ -2.25
PRPF3O43395 MIR1270-201ENST00000459320 83 ntBASIC0.97□□□□□ -2.25
PRPF3O43395 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
PRPF3O43395 COX6CP6-201ENST00000490840 228 ntBASIC0.97□□□□□ -2.25
PRPF3O43395 ACA64.5-201ENST00000516207 127 ntBASIC0.97□□□□□ -2.25
PRPF3O43395 SNORD67.1-201ENST00000516618 108 ntBASIC0.97□□□□□ -2.25
PRPF3O43395 RNU6-403P-201ENST00000363163 104 ntBASIC0.96□□□□□ -2.26
PRPF3O43395 Y_RNA.198-201ENST00000364013 98 ntBASIC0.96□□□□□ -2.26
PRPF3O43395 SNORD58C-201ENST00000365223 64 ntBASIC0.96□□□□□ -2.26
PRPF3O43395 RNU7-102P-201ENST00000458948 62 ntBASIC0.96□□□□□ -2.26
PRPF3O43395 RNU6-351P-201ENST00000516097 100 ntBASIC0.96□□□□□ -2.26
PRPF3O43395 RNU7-137P-201ENST00000516788 62 ntBASIC0.96□□□□□ -2.26
PRPF3O43395 AC096949.1-201ENST00000412047 152 ntBASIC0.95□□□□□ -2.26
PRPF3O43395 RNU6-772P-201ENST00000516042 105 ntBASIC0.95□□□□□ -2.26
PRPF3O43395 RNU7-6P-201ENST00000516845 62 ntBASIC0.95□□□□□ -2.26
PRPF3O43395 AP003327.1-201ENST00000529684 127 ntBASIC0.95□□□□□ -2.26
PRPF3O43395 MIR4491-201ENST00000581087 68 ntBASIC0.95□□□□□ -2.26
PRPF3O43395 MIR3163-201ENST00000581592 73 ntBASIC0.95□□□□□ -2.26
PRPF3O43395 RN7SL793P-201ENST00000583259 296 ntBASIC0.95□□□□□ -2.26
PRPF3O43395 AL359881.1-201ENST00000602916 267 ntBASIC0.95□□□□□ -2.26
PRPF3O43395 AC025166.1-201ENST00000612411 163 ntBASIC0.95□□□□□ -2.26
PRPF3O43395 SNORD114-10-201ENST00000363409 72 ntBASIC0.94□□□□□ -2.26
PRPF3O43395 RNU6-80P-201ENST00000384195 107 ntBASIC0.94□□□□□ -2.26
PRPF3O43395 MIR573-201ENST00000384964 99 ntBASIC0.94□□□□□ -2.26
PRPF3O43395 MIR605-201ENST00000385078 83 ntBASIC0.94□□□□□ -2.26
PRPF3O43395 MT-TI-201ENST00000387365 69 ntBASIC0.94□□□□□ -2.26
PRPF3O43395 Y_RNA.588-201ENST00000391254 102 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms