Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AL022718.1-201ENST00000412004 84 ntBASIC0.7□□□□□ -2.3
PHF1O43189 AC096949.1-201ENST00000412047 152 ntBASIC0.7□□□□□ -2.3
PHF1O43189 RPS26P5-201ENST00000418544 335 ntBASIC0.7□□□□□ -2.3
PHF1O43189 RNU7-123P-201ENST00000515911 60 ntBASIC0.7□□□□□ -2.3
PHF1O43189 AC004812.1-201ENST00000540773 146 ntBASIC0.7□□□□□ -2.3
PHF1O43189 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
PHF1O43189 FAM71BP1-201ENST00000604431 523 ntBASIC0.7□□□□□ -2.3
PHF1O43189 AC021443.1-201ENST00000604478 211 ntBASIC0.7□□□□□ -2.3
PHF1O43189 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.7□□□□□ -2.3
PHF1O43189 Y_RNA.114-201ENST00000363265 113 ntBASIC0.69□□□□□ -2.3
PHF1O43189 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
PHF1O43189 MIR942-201ENST00000401111 86 ntBASIC0.69□□□□□ -2.3
PHF1O43189 AL512326.2-201ENST00000426359 151 ntBASIC0.69□□□□□ -2.3
PHF1O43189 MIR1270-201ENST00000459320 83 ntBASIC0.69□□□□□ -2.3
PHF1O43189 HAR1A.1-201ENST00000459583 118 ntBASIC0.69□□□□□ -2.3
PHF1O43189 PDCD5P2-201ENST00000507570 312 ntBASIC0.69□□□□□ -2.3
PHF1O43189 AC141846.1-201ENST00000568348 142 ntBASIC0.69□□□□□ -2.3
PHF1O43189 AL137067.1-201ENST00000615933 120 ntBASIC0.69□□□□□ -2.3
PHF1O43189 MIR330-201ENST00000362196 94 ntBASIC0.68□□□□□ -2.3
PHF1O43189 RNU6-934P-201ENST00000365154 107 ntBASIC0.68□□□□□ -2.3
PHF1O43189 SNORA18-201ENST00000384416 132 ntBASIC0.68□□□□□ -2.3
PHF1O43189 MIRLET7F2-201ENST00000385277 83 ntBASIC0.68□□□□□ -2.3
PHF1O43189 Y_RNA.586-201ENST00000391146 98 ntBASIC0.68□□□□□ -2.3
PHF1O43189 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.68□□□□□ -2.3
PHF1O43189 SNORD83.1-201ENST00000411362 77 ntBASIC0.68□□□□□ -2.3
PHF1O43189 AL158147.1-201ENST00000443970 75 ntBASIC0.68□□□□□ -2.3
PHF1O43189 RNU7-164P-201ENST00000459221 62 ntBASIC0.68□□□□□ -2.3
PHF1O43189 RNU7-113P-201ENST00000459273 62 ntBASIC0.68□□□□□ -2.3
PHF1O43189 PSMC1P5-201ENST00000512850 177 ntBASIC0.68□□□□□ -2.3
PHF1O43189 RNA5SP272-201ENST00000516095 111 ntBASIC0.68□□□□□ -2.3
PHF1O43189 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
PHF1O43189 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.68□□□□□ -2.3
PHF1O43189 MIR3133-201ENST00000583157 78 ntBASIC0.68□□□□□ -2.3
PHF1O43189 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.68□□□□□ -2.3
PHF1O43189 TUG1_4.1-201ENST00000619464 181 ntBASIC0.68□□□□□ -2.3
PHF1O43189 RNU6-647P-201ENST00000364243 107 ntBASIC0.67□□□□□ -2.3
PHF1O43189 RNY1P13-201ENST00000365030 105 ntBASIC0.67□□□□□ -2.3
PHF1O43189 RNU6-949P-201ENST00000384040 107 ntBASIC0.67□□□□□ -2.3
PHF1O43189 MIR146A-201ENST00000385201 99 ntBASIC0.67□□□□□ -2.3
PHF1O43189 SNORA40-201ENST00000388090 126 ntBASIC0.67□□□□□ -2.3
PHF1O43189 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.67□□□□□ -2.3
PHF1O43189 RNU6-994P-201ENST00000410507 111 ntBASIC0.67□□□□□ -2.3
PHF1O43189 AC067940.1-201ENST00000458411 300 ntBASIC0.67□□□□□ -2.3
PHF1O43189 RNU7-185P-201ENST00000459215 60 ntBASIC0.67□□□□□ -2.3
PHF1O43189 RNY4P20-201ENST00000516678 93 ntBASIC0.67□□□□□ -2.3
PHF1O43189 AC025627.3-201ENST00000582078 182 ntBASIC0.67□□□□□ -2.3
PHF1O43189 AC020891.4-201ENST00000605745 93 ntBASIC0.67□□□□□ -2.3
PHF1O43189 MIR6835-201ENST00000621552 64 ntBASIC0.67□□□□□ -2.3
PHF1O43189 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
PHF1O43189 MIR1-1-201ENST00000362147 71 ntBASIC0.66□□□□□ -2.3
PHF1O43189 Y_RNA.294-201ENST00000364916 102 ntBASIC0.66□□□□□ -2.3
PHF1O43189 RNU6-1335P-201ENST00000365426 107 ntBASIC0.66□□□□□ -2.3
PHF1O43189 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
PHF1O43189 SNORD89-201ENST00000390981 114 ntBASIC0.66□□□□□ -2.3
PHF1O43189 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.66□□□□□ -2.3
PHF1O43189 MIR4771-2-201ENST00000577758 74 ntBASIC0.66□□□□□ -2.3
PHF1O43189 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.66□□□□□ -2.3
PHF1O43189 MIR4804-201ENST00000581683 73 ntBASIC0.66□□□□□ -2.3
PHF1O43189 MIR4771-1-201ENST00000582617 74 ntBASIC0.66□□□□□ -2.3
PHF1O43189 MIR4676-201ENST00000583078 72 ntBASIC0.66□□□□□ -2.3
PHF1O43189 MIR548AE2-201ENST00000583456 67 ntBASIC0.66□□□□□ -2.3
PHF1O43189 AL136317.1-201ENST00000612653 226 ntBASIC0.66□□□□□ -2.3
PHF1O43189 RNU6-704P-201ENST00000364162 103 ntBASIC0.65□□□□□ -2.31
PHF1O43189 Y_RNA.299-201ENST00000364973 94 ntBASIC0.65□□□□□ -2.31
PHF1O43189 MIR608-201ENST00000384820 100 ntBASIC0.65□□□□□ -2.31
PHF1O43189 MIR125B2-201ENST00000385128 89 ntBASIC0.65□□□□□ -2.31
PHF1O43189 U8.15-201ENST00000390947 134 ntBASIC0.65□□□□□ -2.31
PHF1O43189 MIR1197-201ENST00000408818 88 ntBASIC0.65□□□□□ -2.31
PHF1O43189 AL606490.4-201ENST00000423117 127 ntBASIC0.65□□□□□ -2.31
PHF1O43189 RN7SKP19-201ENST00000516016 252 ntBASIC0.65□□□□□ -2.31
PHF1O43189 RNA5SP33-201ENST00000516687 98 ntBASIC0.65□□□□□ -2.31
PHF1O43189 MIR4711-201ENST00000578274 70 ntBASIC0.65□□□□□ -2.31
PHF1O43189 SNORD92-201ENST00000585078 85 ntBASIC0.65□□□□□ -2.31
PHF1O43189 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.65□□□□□ -2.31
PHF1O43189 MIR6866-201ENST00000638146 69 ntBASIC0.65□□□□□ -2.31
PHF1O43189 AL589743.1-201ENST00000551932 2712 ntBASIC0.65□□□□□ -2.31
PHF1O43189 HSBP1P2-201ENST00000299671 229 ntBASIC0.64□□□□□ -2.31
PHF1O43189 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
PHF1O43189 RNU6-187P-201ENST00000384139 106 ntBASIC0.64□□□□□ -2.31
PHF1O43189 RNU6-35P-201ENST00000384530 107 ntBASIC0.64□□□□□ -2.31
PHF1O43189 RNU6-1104P-201ENST00000384723 104 ntBASIC0.64□□□□□ -2.31
PHF1O43189 SNORD105-201ENST00000386910 85 ntBASIC0.64□□□□□ -2.31
PHF1O43189 Y_RNA.588-201ENST00000391254 102 ntBASIC0.64□□□□□ -2.31
PHF1O43189 MIR1257-201ENST00000408490 117 ntBASIC0.64□□□□□ -2.31
PHF1O43189 RNA5SP193-201ENST00000410353 107 ntBASIC0.64□□□□□ -2.31
PHF1O43189 RNA5SP237-201ENST00000410414 113 ntBASIC0.64□□□□□ -2.31
PHF1O43189 RNU4-69P-201ENST00000410677 143 ntBASIC0.64□□□□□ -2.31
PHF1O43189 RNA5SP136-201ENST00000410906 107 ntBASIC0.64□□□□□ -2.31
PHF1O43189 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.64□□□□□ -2.31
PHF1O43189 RNU7-56P-201ENST00000458744 62 ntBASIC0.64□□□□□ -2.31
PHF1O43189 RNU7-79P-201ENST00000516082 62 ntBASIC0.64□□□□□ -2.31
PHF1O43189 AC022523.2-201ENST00000561045 150 ntBASIC0.64□□□□□ -2.31
PHF1O43189 AL353765.1-201ENST00000605514 183 ntBASIC0.64□□□□□ -2.31
PHF1O43189 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
PHF1O43189 Y_RNA.42-201ENST00000362660 108 ntBASIC0.63□□□□□ -2.31
PHF1O43189 RNU6-774P-201ENST00000363238 107 ntBASIC0.63□□□□□ -2.31
PHF1O43189 MIR539-201ENST00000365690 78 ntBASIC0.63□□□□□ -2.31
PHF1O43189 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
PHF1O43189 AC015818.7-201ENST00000428754 109 ntBASIC0.63□□□□□ -2.31
PHF1O43189 AC087499.7-201ENST00000441958 109 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms