Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 PDCD5P2-201ENST00000507570 312 ntBASIC0.73□□□□□ -2.29
CDX4O14627 RNU7-123P-201ENST00000515911 60 ntBASIC0.73□□□□□ -2.29
CDX4O14627 ACA64.5-201ENST00000516207 127 ntBASIC0.73□□□□□ -2.29
CDX4O14627 RNU6-1061P-201ENST00000516530 99 ntBASIC0.73□□□□□ -2.29
CDX4O14627 AC004812.1-201ENST00000540773 146 ntBASIC0.73□□□□□ -2.29
CDX4O14627 AC022523.2-201ENST00000561045 150 ntBASIC0.73□□□□□ -2.29
CDX4O14627 MIR4264-201ENST00000583520 66 ntBASIC0.73□□□□□ -2.29
CDX4O14627 Y_RNA.433-201ENST00000384089 102 ntBASIC0.72□□□□□ -2.29
CDX4O14627 RNU6-1104P-201ENST00000384723 104 ntBASIC0.72□□□□□ -2.29
CDX4O14627 MT-TN-201ENST00000387400 73 ntBASIC0.72□□□□□ -2.29
CDX4O14627 Y_RNA.617-201ENST00000410920 90 ntBASIC0.72□□□□□ -2.29
CDX4O14627 RNU4-61P-201ENST00000411243 107 ntBASIC0.72□□□□□ -2.29
CDX4O14627 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.72□□□□□ -2.29
CDX4O14627 RNU6-893P-201ENST00000458841 100 ntBASIC0.72□□□□□ -2.29
CDX4O14627 RNU7-62P-201ENST00000458856 62 ntBASIC0.72□□□□□ -2.29
CDX4O14627 snoU13.2-201ENST00000459201 104 ntBASIC0.72□□□□□ -2.29
CDX4O14627 RNU7-113P-201ENST00000459273 62 ntBASIC0.72□□□□□ -2.29
CDX4O14627 RNY4P20-201ENST00000516678 93 ntBASIC0.72□□□□□ -2.29
CDX4O14627 MIR8087-201ENST00000612745 78 ntBASIC0.72□□□□□ -2.29
CDX4O14627 Y_RNA.71-201ENST00000362892 104 ntBASIC0.71□□□□□ -2.3
CDX4O14627 RNA5SP257-201ENST00000363023 116 ntBASIC0.71□□□□□ -2.3
CDX4O14627 SNORD114-2-201ENST00000363953 78 ntBASIC0.71□□□□□ -2.3
CDX4O14627 SNORD113.3-201ENST00000364630 78 ntBASIC0.71□□□□□ -2.3
CDX4O14627 RNU1-36P-201ENST00000365130 165 ntBASIC0.71□□□□□ -2.3
CDX4O14627 RNU6-580P-201ENST00000365159 107 ntBASIC0.71□□□□□ -2.3
CDX4O14627 RNU6-81P-201ENST00000365608 104 ntBASIC0.71□□□□□ -2.3
CDX4O14627 SNORA32-201ENST00000384072 121 ntBASIC0.71□□□□□ -2.3
CDX4O14627 SNORA18-201ENST00000384416 132 ntBASIC0.71□□□□□ -2.3
CDX4O14627 Y_RNA.531-201ENST00000384589 121 ntBASIC0.71□□□□□ -2.3
CDX4O14627 RNU6-959P-201ENST00000384671 107 ntBASIC0.71□□□□□ -2.3
CDX4O14627 SNORD111-201ENST00000408139 94 ntBASIC0.71□□□□□ -2.3
CDX4O14627 Y_RNA.630-201ENST00000411370 108 ntBASIC0.71□□□□□ -2.3
CDX4O14627 AC015818.7-201ENST00000428754 109 ntBASIC0.71□□□□□ -2.3
CDX4O14627 AC087499.7-201ENST00000441958 109 ntBASIC0.71□□□□□ -2.3
CDX4O14627 AC113410.1-201ENST00000505029 247 ntBASIC0.71□□□□□ -2.3
CDX4O14627 RNA5SP33-201ENST00000516687 98 ntBASIC0.71□□□□□ -2.3
CDX4O14627 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.71□□□□□ -2.3
CDX4O14627 RNU6-94P-201ENST00000607728 107 ntBASIC0.71□□□□□ -2.3
CDX4O14627 AL136317.1-201ENST00000612653 226 ntBASIC0.71□□□□□ -2.3
CDX4O14627 AC106800.4-201ENST00000614905 153 ntBASIC0.71□□□□□ -2.3
CDX4O14627 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
CDX4O14627 AL589743.1-201ENST00000551932 2712 ntBASIC0.7□□□□□ -2.3
CDX4O14627 MIR377-201ENST00000362145 69 ntBASIC0.7□□□□□ -2.3
CDX4O14627 MIR330-201ENST00000362196 94 ntBASIC0.7□□□□□ -2.3
CDX4O14627 Y_RNA.168-201ENST00000363740 102 ntBASIC0.7□□□□□ -2.3
CDX4O14627 RNU6-80P-201ENST00000384195 107 ntBASIC0.7□□□□□ -2.3
CDX4O14627 MT-TI-201ENST00000387365 69 ntBASIC0.7□□□□□ -2.3
CDX4O14627 RNU6-994P-201ENST00000410507 111 ntBASIC0.7□□□□□ -2.3
CDX4O14627 SNORD83.1-201ENST00000411362 77 ntBASIC0.7□□□□□ -2.3
CDX4O14627 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CDX4O14627 RNA5SP347-201ENST00000362445 119 ntBASIC0.69□□□□□ -2.3
CDX4O14627 SNORD115-2-201ENST00000362842 82 ntBASIC0.69□□□□□ -2.3
CDX4O14627 Y_RNA.85-201ENST00000363014 111 ntBASIC0.69□□□□□ -2.3
CDX4O14627 SNORD115-20-201ENST00000365099 82 ntBASIC0.69□□□□□ -2.3
CDX4O14627 SNORD58C-201ENST00000365223 64 ntBASIC0.69□□□□□ -2.3
CDX4O14627 Y_RNA.528-201ENST00000384575 108 ntBASIC0.69□□□□□ -2.3
CDX4O14627 MIR563-201ENST00000385080 79 ntBASIC0.69□□□□□ -2.3
CDX4O14627 RNU6-1165P-201ENST00000410119 107 ntBASIC0.69□□□□□ -2.3
CDX4O14627 RNA5SP237-201ENST00000410414 113 ntBASIC0.69□□□□□ -2.3
CDX4O14627 RNU6-772P-201ENST00000516042 105 ntBASIC0.69□□□□□ -2.3
CDX4O14627 AC025627.3-201ENST00000582078 182 ntBASIC0.69□□□□□ -2.3
CDX4O14627 MIR548AE2-201ENST00000583456 67 ntBASIC0.69□□□□□ -2.3
CDX4O14627 AC013244.2-201ENST00000603396 103 ntBASIC0.69□□□□□ -2.3
CDX4O14627 AC132825.6-201ENST00000638861 357 ntBASIC0.69□□□□□ -2.3
CDX4O14627 MIR30D-201ENST00000362283 70 ntBASIC0.68□□□□□ -2.3
CDX4O14627 Y_RNA.261-201ENST00000364631 102 ntBASIC0.68□□□□□ -2.3
CDX4O14627 RNU6-934P-201ENST00000365154 107 ntBASIC0.68□□□□□ -2.3
CDX4O14627 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.68□□□□□ -2.3
CDX4O14627 U7.7-201ENST00000459276 60 ntBASIC0.68□□□□□ -2.3
CDX4O14627 MIR1270-201ENST00000459320 83 ntBASIC0.68□□□□□ -2.3
CDX4O14627 PSMC1P5-201ENST00000512850 177 ntBASIC0.68□□□□□ -2.3
CDX4O14627 RNU6-1333P-201ENST00000516162 93 ntBASIC0.68□□□□□ -2.3
CDX4O14627 RNA5SP255-201ENST00000516370 107 ntBASIC0.68□□□□□ -2.3
CDX4O14627 RNU6-659P-201ENST00000516454 104 ntBASIC0.68□□□□□ -2.3
CDX4O14627 AC141846.1-201ENST00000568348 142 ntBASIC0.68□□□□□ -2.3
CDX4O14627 AC025166.1-201ENST00000612411 163 ntBASIC0.68□□□□□ -2.3
CDX4O14627 AL365222.1-201ENST00000614661 98 ntBASIC0.68□□□□□ -2.3
CDX4O14627 AL662814.1-201ENST00000617364 121 ntBASIC0.68□□□□□ -2.3
CDX4O14627 MTND5P18-201ENST00000445624 1801 ntBASIC0.67□□□□□ -2.3
CDX4O14627 AL157777.2-201ENST00000258070 137 ntBASIC0.67□□□□□ -2.3
CDX4O14627 SNORD116-14-201ENST00000383894 92 ntBASIC0.67□□□□□ -2.3
CDX4O14627 SNORD116-17-201ENST00000383929 92 ntBASIC0.67□□□□□ -2.3
CDX4O14627 SNORD116-15-201ENST00000384445 92 ntBASIC0.67□□□□□ -2.3
CDX4O14627 SNORD116-19-201ENST00000384729 92 ntBASIC0.67□□□□□ -2.3
CDX4O14627 MIRLET7F2-201ENST00000385277 83 ntBASIC0.67□□□□□ -2.3
CDX4O14627 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.67□□□□□ -2.3
CDX4O14627 RNU6-735P-201ENST00000410612 107 ntBASIC0.67□□□□□ -2.3
CDX4O14627 RNA5SP136-201ENST00000410906 107 ntBASIC0.67□□□□□ -2.3
CDX4O14627 RNU6-1086P-201ENST00000410930 100 ntBASIC0.67□□□□□ -2.3
CDX4O14627 AL606753.1-201ENST00000427435 87 ntBASIC0.67□□□□□ -2.3
CDX4O14627 RNU7-79P-201ENST00000516082 62 ntBASIC0.67□□□□□ -2.3
CDX4O14627 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CDX4O14627 Y_RNA.127-201ENST00000363386 109 ntBASIC0.66□□□□□ -2.3
CDX4O14627 Y_RNA.198-201ENST00000364013 98 ntBASIC0.66□□□□□ -2.3
CDX4O14627 RNY1P13-201ENST00000365030 105 ntBASIC0.66□□□□□ -2.3
CDX4O14627 SNORA19-201ENST00000384737 128 ntBASIC0.66□□□□□ -2.3
CDX4O14627 MIR146A-201ENST00000385201 99 ntBASIC0.66□□□□□ -2.3
CDX4O14627 MIR1197-201ENST00000408818 88 ntBASIC0.66□□□□□ -2.3
CDX4O14627 RNU4-69P-201ENST00000410677 143 ntBASIC0.66□□□□□ -2.3
CDX4O14627 RNU6-1110P-201ENST00000516462 101 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms