Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 SNORA27.4-201ENST00000516650 95 ntBASIC-0.87□□□□□ -2.55
SDCBPO00560 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.87□□□□□ -2.55
SDCBPO00560 AC096720.1-201ENST00000604441 183 ntBASIC-0.87□□□□□ -2.55
SDCBPO00560 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.88□□□□□ -2.55
SDCBPO00560 RNU6-524P-201ENST00000384270 107 ntBASIC-0.88□□□□□ -2.55
SDCBPO00560 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.88□□□□□ -2.55
SDCBPO00560 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.88□□□□□ -2.55
SDCBPO00560 RNU7-74P-201ENST00000459104 62 ntBASIC-0.88□□□□□ -2.55
SDCBPO00560 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.88□□□□□ -2.55
SDCBPO00560 AC112487.2-201ENST00000637950 304 ntBASIC-0.88□□□□□ -2.55
SDCBPO00560 SNORA25.1-201ENST00000362326 128 ntBASIC-0.89□□□□□ -2.55
SDCBPO00560 RNU4-73P-201ENST00000363164 141 ntBASIC-0.89□□□□□ -2.55
SDCBPO00560 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.89□□□□□ -2.55
SDCBPO00560 RNU6-154P-201ENST00000384306 106 ntBASIC-0.89□□□□□ -2.55
SDCBPO00560 MIR519A1-201ENST00000385257 85 ntBASIC-0.89□□□□□ -2.55
SDCBPO00560 SNORD63B-201ENST00000411005 70 ntBASIC-0.89□□□□□ -2.55
SDCBPO00560 RNU7-152P-201ENST00000458982 64 ntBASIC-0.89□□□□□ -2.55
SDCBPO00560 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.89□□□□□ -2.55
SDCBPO00560 RNU6-277P-201ENST00000516272 106 ntBASIC-0.89□□□□□ -2.55
SDCBPO00560 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.89□□□□□ -2.55
SDCBPO00560 MIR4280-201ENST00000582178 76 ntBASIC-0.89□□□□□ -2.55
SDCBPO00560 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.9□□□□□ -2.55
SDCBPO00560 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.9□□□□□ -2.55
SDCBPO00560 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.9□□□□□ -2.55
SDCBPO00560 RNU6-326P-201ENST00000365480 107 ntBASIC-0.9□□□□□ -2.55
SDCBPO00560 RNY1P6-201ENST00000384193 109 ntBASIC-0.9□□□□□ -2.55
SDCBPO00560 MIR604-201ENST00000384880 94 ntBASIC-0.9□□□□□ -2.55
SDCBPO00560 MIR616-201ENST00000385293 97 ntBASIC-0.9□□□□□ -2.55
SDCBPO00560 AC080013.6-201ENST00000606185 215 ntBASIC-0.9□□□□□ -2.55
SDCBPO00560 U4.1-201ENST00000620349 87 ntBASIC-0.9□□□□□ -2.55
SDCBPO00560 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.91□□□□□ -2.56
SDCBPO00560 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.91□□□□□ -2.56
SDCBPO00560 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.91□□□□□ -2.56
SDCBPO00560 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.91□□□□□ -2.56
SDCBPO00560 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.91□□□□□ -2.56
SDCBPO00560 AC098614.3-201ENST00000438957 440 ntBASIC-0.91□□□□□ -2.56
SDCBPO00560 RNU6-86P-201ENST00000606534 107 ntBASIC-0.91□□□□□ -2.56
SDCBPO00560 UBE2WP1-201ENST00000362030 340 ntBASIC-0.92□□□□□ -2.56
SDCBPO00560 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.92□□□□□ -2.56
SDCBPO00560 RNU6-978P-201ENST00000364371 103 ntBASIC-0.92□□□□□ -2.56
SDCBPO00560 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.92□□□□□ -2.56
SDCBPO00560 MIR617-201ENST00000385030 97 ntBASIC-0.92□□□□□ -2.56
SDCBPO00560 MIR548I2-201ENST00000408348 149 ntBASIC-0.92□□□□□ -2.56
SDCBPO00560 RNU7-106P-201ENST00000459514 67 ntBASIC-0.92□□□□□ -2.56
SDCBPO00560 SNORD38.3-201ENST00000516599 73 ntBASIC-0.92□□□□□ -2.56
SDCBPO00560 AP000676.1-201ENST00000533307 52 ntBASIC-0.92□□□□□ -2.56
SDCBPO00560 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.93□□□□□ -2.56
SDCBPO00560 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.93□□□□□ -2.56
SDCBPO00560 RNU6-900P-201ENST00000384498 102 ntBASIC-0.93□□□□□ -2.56
SDCBPO00560 MIR206-201ENST00000384872 86 ntBASIC-0.93□□□□□ -2.56
SDCBPO00560 MT-TL1-201ENST00000386347 75 ntBASIC-0.93□□□□□ -2.56
SDCBPO00560 MTND4LP30-201ENST00000454092 297 ntBASIC-0.93□□□□□ -2.56
SDCBPO00560 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.93□□□□□ -2.56
SDCBPO00560 RNU7-48P-201ENST00000458875 63 ntBASIC-0.93□□□□□ -2.56
SDCBPO00560 RNU2-35P-201ENST00000516446 142 ntBASIC-0.93□□□□□ -2.56
SDCBPO00560 MIR4460-201ENST00000577862 86 ntBASIC-0.93□□□□□ -2.56
SDCBPO00560 AC011603.4-201ENST00000611325 277 ntBASIC-0.93□□□□□ -2.56
SDCBPO00560 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
SDCBPO00560 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.94□□□□□ -2.56
SDCBPO00560 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.94□□□□□ -2.56
SDCBPO00560 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.94□□□□□ -2.56
SDCBPO00560 MIR224-201ENST00000384889 81 ntBASIC-0.94□□□□□ -2.56
SDCBPO00560 MIR204-201ENST00000385200 110 ntBASIC-0.94□□□□□ -2.56
SDCBPO00560 MIR1302-11-201ENST00000408051 138 ntBASIC-0.94□□□□□ -2.56
SDCBPO00560 MIR1302-9-201ENST00000408365 138 ntBASIC-0.94□□□□□ -2.56
SDCBPO00560 MIR1302-10-201ENST00000408734 138 ntBASIC-0.94□□□□□ -2.56
SDCBPO00560 RNU6-570P-201ENST00000517051 105 ntBASIC-0.94□□□□□ -2.56
SDCBPO00560 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.94□□□□□ -2.56
SDCBPO00560 MIR1302-2-201ENST00000607096 138 ntBASIC-0.94□□□□□ -2.56
SDCBPO00560 AC145423.2-201ENST00000610631 239 ntBASIC-0.94□□□□□ -2.56
SDCBPO00560 AC073869.6-201ENST00000640656 341 ntBASIC-0.94□□□□□ -2.56
SDCBPO00560 RNU6-170P-201ENST00000362832 104 ntBASIC-0.95□□□□□ -2.56
SDCBPO00560 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.95□□□□□ -2.56
SDCBPO00560 SNORA51.5-201ENST00000384126 131 ntBASIC-0.95□□□□□ -2.56
SDCBPO00560 MIR624-201ENST00000385217 97 ntBASIC-0.95□□□□□ -2.56
SDCBPO00560 SNORA49-201ENST00000386157 136 ntBASIC-0.95□□□□□ -2.56
SDCBPO00560 RNU6-876P-201ENST00000391295 104 ntBASIC-0.95□□□□□ -2.56
SDCBPO00560 RNU6-735P-201ENST00000410612 107 ntBASIC-0.95□□□□□ -2.56
SDCBPO00560 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.95□□□□□ -2.56
SDCBPO00560 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.95□□□□□ -2.56
SDCBPO00560 MIR6851-201ENST00000617060 67 ntBASIC-0.95□□□□□ -2.56
SDCBPO00560 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.95□□□□□ -2.56
SDCBPO00560 RNU6-901P-201ENST00000384593 106 ntBASIC-0.96□□□□□ -2.56
SDCBPO00560 MT-TY-201ENST00000387409 66 ntBASIC-0.96□□□□□ -2.56
SDCBPO00560 RNU4-43P-201ENST00000410628 137 ntBASIC-0.96□□□□□ -2.56
SDCBPO00560 RNU6-651P-201ENST00000411040 105 ntBASIC-0.96□□□□□ -2.56
SDCBPO00560 snoU13.13-201ENST00000458842 104 ntBASIC-0.96□□□□□ -2.56
SDCBPO00560 MIR2113-201ENST00000459007 91 ntBASIC-0.96□□□□□ -2.56
SDCBPO00560 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.96□□□□□ -2.56
SDCBPO00560 AC090574.1-201ENST00000623186 233 ntBASIC-0.96□□□□□ -2.56
SDCBPO00560 RNU6-623P-201ENST00000363143 105 ntBASIC-0.97□□□□□ -2.56
SDCBPO00560 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.97□□□□□ -2.56
SDCBPO00560 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.97□□□□□ -2.56
SDCBPO00560 RNU6-381P-201ENST00000391259 108 ntBASIC-0.97□□□□□ -2.56
SDCBPO00560 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.97□□□□□ -2.56
SDCBPO00560 AC021146.6-201ENST00000514659 117 ntBASIC-0.97□□□□□ -2.56
SDCBPO00560 RNU6-976P-201ENST00000516086 111 ntBASIC-0.97□□□□□ -2.56
SDCBPO00560 RNU6-758P-201ENST00000516292 89 ntBASIC-0.97□□□□□ -2.56
SDCBPO00560 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.97□□□□□ -2.56
SDCBPO00560 AC037487.3-201ENST00000606668 112 ntBASIC-0.97□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms