Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 RNU4-43P-201ENST00000410628 137 ntBASIC-0.73□□□□□ -2.53
DFFAO00273 AC097635.1-201ENST00000450678 155 ntBASIC-0.73□□□□□ -2.53
DFFAO00273 AL359881.1-201ENST00000602916 267 ntBASIC-0.73□□□□□ -2.53
DFFAO00273 AC090971.5-201ENST00000621102 293 ntBASIC-0.73□□□□□ -2.53
DFFAO00273 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.74□□□□□ -2.53
DFFAO00273 SNORD115-2-201ENST00000362842 82 ntBASIC-0.74□□□□□ -2.53
DFFAO00273 RNU6-770P-201ENST00000363929 105 ntBASIC-0.74□□□□□ -2.53
DFFAO00273 RNA5SP205-201ENST00000364653 136 ntBASIC-0.74□□□□□ -2.53
DFFAO00273 RNU6-865P-201ENST00000364772 107 ntBASIC-0.74□□□□□ -2.53
DFFAO00273 RNY3P1-201ENST00000365085 102 ntBASIC-0.74□□□□□ -2.53
DFFAO00273 SNORD115-20-201ENST00000365099 82 ntBASIC-0.74□□□□□ -2.53
DFFAO00273 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.74□□□□□ -2.53
DFFAO00273 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.74□□□□□ -2.53
DFFAO00273 MIR635-201ENST00000384830 98 ntBASIC-0.74□□□□□ -2.53
DFFAO00273 AL022718.1-201ENST00000412004 84 ntBASIC-0.74□□□□□ -2.53
DFFAO00273 ELOCP20-201ENST00000422460 345 ntBASIC-0.74□□□□□ -2.53
DFFAO00273 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.74□□□□□ -2.53
DFFAO00273 MIR4493-201ENST00000584016 73 ntBASIC-0.74□□□□□ -2.53
DFFAO00273 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.74□□□□□ -2.53
DFFAO00273 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.75□□□□□ -2.53
DFFAO00273 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.75□□□□□ -2.53
DFFAO00273 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.75□□□□□ -2.53
DFFAO00273 RNU6-381P-201ENST00000391259 108 ntBASIC-0.75□□□□□ -2.53
DFFAO00273 SNORD2.1-201ENST00000458762 69 ntBASIC-0.75□□□□□ -2.53
DFFAO00273 TRAJ51-201ENST00000504127 63 ntBASIC-0.75□□□□□ -2.53
DFFAO00273 SNORD116-25-201ENST00000516517 92 ntBASIC-0.75□□□□□ -2.53
DFFAO00273 AL590491.3-201ENST00000610731 82 ntBASIC-0.75□□□□□ -2.53
DFFAO00273 FTX_2.1-201ENST00000618816 94 ntBASIC-0.75□□□□□ -2.53
DFFAO00273 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.76□□□□□ -2.53
DFFAO00273 RNU6-978P-201ENST00000364371 103 ntBASIC-0.76□□□□□ -2.53
DFFAO00273 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.76□□□□□ -2.53
DFFAO00273 MIR624-201ENST00000385217 97 ntBASIC-0.76□□□□□ -2.53
DFFAO00273 RNU6-284P-201ENST00000411105 106 ntBASIC-0.76□□□□□ -2.53
DFFAO00273 RBMX2P4-201ENST00000441256 376 ntBASIC-0.76□□□□□ -2.53
DFFAO00273 RNY3P15-201ENST00000516297 97 ntBASIC-0.76□□□□□ -2.53
DFFAO00273 AC006504.6-201ENST00000590142 199 ntBASIC-0.76□□□□□ -2.53
DFFAO00273 AC105081.1-201ENST00000617727 106 ntBASIC-0.76□□□□□ -2.53
DFFAO00273 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.77□□□□□ -2.53
DFFAO00273 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.77□□□□□ -2.53
DFFAO00273 U8.6-201ENST00000364939 135 ntBASIC-0.77□□□□□ -2.53
DFFAO00273 RNU6-806P-201ENST00000365147 105 ntBASIC-0.77□□□□□ -2.53
DFFAO00273 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.77□□□□□ -2.53
DFFAO00273 RNU6-480P-201ENST00000384332 107 ntBASIC-0.77□□□□□ -2.53
DFFAO00273 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.77□□□□□ -2.53
DFFAO00273 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.77□□□□□ -2.53
DFFAO00273 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.77□□□□□ -2.53
DFFAO00273 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.77□□□□□ -2.53
DFFAO00273 RN7SL660P-201ENST00000614852 299 ntBASIC-0.77□□□□□ -2.53
DFFAO00273 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.78□□□□□ -2.53
DFFAO00273 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.78□□□□□ -2.53
DFFAO00273 RNU7-74P-201ENST00000459104 62 ntBASIC-0.78□□□□□ -2.53
DFFAO00273 AC114755.3-201ENST00000481111 251 ntBASIC-0.78□□□□□ -2.53
DFFAO00273 MIR3920-201ENST00000581751 86 ntBASIC-0.78□□□□□ -2.53
DFFAO00273 MIR548AE2-201ENST00000583456 67 ntBASIC-0.78□□□□□ -2.53
DFFAO00273 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.79□□□□□ -2.54
DFFAO00273 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.79□□□□□ -2.54
DFFAO00273 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.79□□□□□ -2.54
DFFAO00273 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.79□□□□□ -2.54
DFFAO00273 RNU6-875P-201ENST00000516488 106 ntBASIC-0.79□□□□□ -2.54
DFFAO00273 MIR4432-201ENST00000581823 84 ntBASIC-0.79□□□□□ -2.54
DFFAO00273 MIR4636-201ENST00000582271 80 ntBASIC-0.79□□□□□ -2.54
DFFAO00273 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.8□□□□□ -2.54
DFFAO00273 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.8□□□□□ -2.54
DFFAO00273 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.8□□□□□ -2.54
DFFAO00273 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.8□□□□□ -2.54
DFFAO00273 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.8□□□□□ -2.54
DFFAO00273 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.8□□□□□ -2.54
DFFAO00273 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.8□□□□□ -2.54
DFFAO00273 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.8□□□□□ -2.54
DFFAO00273 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.8□□□□□ -2.54
DFFAO00273 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.8□□□□□ -2.54
DFFAO00273 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.8□□□□□ -2.54
DFFAO00273 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.8□□□□□ -2.54
DFFAO00273 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.81□□□□□ -2.54
DFFAO00273 RNU4-17P-201ENST00000365598 141 ntBASIC-0.81□□□□□ -2.54
DFFAO00273 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.81□□□□□ -2.54
DFFAO00273 MIR604-201ENST00000384880 94 ntBASIC-0.81□□□□□ -2.54
DFFAO00273 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.81□□□□□ -2.54
DFFAO00273 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.81□□□□□ -2.54
DFFAO00273 RNU7-13P-201ENST00000516413 62 ntBASIC-0.81□□□□□ -2.54
DFFAO00273 MIR4500-201ENST00000579472 76 ntBASIC-0.81□□□□□ -2.54
DFFAO00273 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.81□□□□□ -2.54
DFFAO00273 MIR369-201ENST00000362155 70 ntBASIC-0.82□□□□□ -2.54
DFFAO00273 RNU6-103P-201ENST00000363686 107 ntBASIC-0.82□□□□□ -2.54
DFFAO00273 RNU1-141P-201ENST00000364623 158 ntBASIC-0.82□□□□□ -2.54
DFFAO00273 MIR519A1-201ENST00000385257 85 ntBASIC-0.82□□□□□ -2.54
DFFAO00273 RNU6-651P-201ENST00000411040 105 ntBASIC-0.82□□□□□ -2.54
DFFAO00273 MTND5P22-201ENST00000458380 195 ntBASIC-0.82□□□□□ -2.54
DFFAO00273 RNU7-188P-201ENST00000517063 64 ntBASIC-0.82□□□□□ -2.54
DFFAO00273 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
DFFAO00273 MIR4473-201ENST00000583731 91 ntBASIC-0.82□□□□□ -2.54
DFFAO00273 AL365265.1-201ENST00000621045 234 ntBASIC-0.82□□□□□ -2.54
DFFAO00273 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.83□□□□□ -2.54
DFFAO00273 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.83□□□□□ -2.54
DFFAO00273 SNORD42.2-201ENST00000365570 69 ntBASIC-0.83□□□□□ -2.54
DFFAO00273 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.83□□□□□ -2.54
DFFAO00273 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.83□□□□□ -2.54
DFFAO00273 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.83□□□□□ -2.54
DFFAO00273 AC113618.1-201ENST00000416747 285 ntBASIC-0.83□□□□□ -2.54
DFFAO00273 AL121914.1-201ENST00000450188 156 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 253.8 ms