Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 RNU6-1325P-201ENST00000364905 105 ntBASIC1.42□□□□□ -2.18
CBX4O00257 Y_RNA.344-201ENST00000365381 112 ntBASIC1.42□□□□□ -2.18
CBX4O00257 Y_RNA.507-201ENST00000384500 99 ntBASIC1.42□□□□□ -2.18
CBX4O00257 MIR1270-201ENST00000459320 83 ntBASIC1.42□□□□□ -2.18
CBX4O00257 RPL39P34-201ENST00000477141 156 ntBASIC1.42□□□□□ -2.18
CBX4O00257 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.42□□□□□ -2.18
CBX4O00257 RNA5SP220-201ENST00000516298 104 ntBASIC1.42□□□□□ -2.18
CBX4O00257 SNORD67.1-201ENST00000516618 108 ntBASIC1.42□□□□□ -2.18
CBX4O00257 MIR4452-201ENST00000583004 71 ntBASIC1.42□□□□□ -2.18
CBX4O00257 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.42□□□□□ -2.18
CBX4O00257 MIR6734-201ENST00000621166 68 ntBASIC1.42□□□□□ -2.18
CBX4O00257 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CBX4O00257 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CBX4O00257 Y_RNA.49-201ENST00000362714 112 ntBASIC1.41□□□□□ -2.18
CBX4O00257 SNORD114-10-201ENST00000363409 72 ntBASIC1.41□□□□□ -2.18
CBX4O00257 SNORA63.5-201ENST00000363548 123 ntBASIC1.41□□□□□ -2.18
CBX4O00257 MIR1912-201ENST00000410389 80 ntBASIC1.41□□□□□ -2.18
CBX4O00257 AC002429.1-201ENST00000437672 148 ntBASIC1.41□□□□□ -2.18
CBX4O00257 AC067940.1-201ENST00000458411 300 ntBASIC1.41□□□□□ -2.18
CBX4O00257 RNA5SP480-201ENST00000516840 109 ntBASIC1.41□□□□□ -2.18
CBX4O00257 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.41□□□□□ -2.18
CBX4O00257 AC027335.2-201ENST00000624030 375 ntBASIC1.41□□□□□ -2.18
CBX4O00257 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.41□□□□□ -2.18
CBX4O00257 MIR26B-201ENST00000362251 77 ntBASIC1.4□□□□□ -2.19
CBX4O00257 Y_RNA.281-201ENST00000364774 94 ntBASIC1.4□□□□□ -2.19
CBX4O00257 Y_RNA.309-201ENST00000365046 111 ntBASIC1.4□□□□□ -2.19
CBX4O00257 RNU6-934P-201ENST00000365154 107 ntBASIC1.4□□□□□ -2.19
CBX4O00257 SNORD114-22-201ENST00000365423 72 ntBASIC1.4□□□□□ -2.19
CBX4O00257 RNU6-429P-201ENST00000384582 108 ntBASIC1.4□□□□□ -2.19
CBX4O00257 RNU7-137P-201ENST00000516788 62 ntBASIC1.4□□□□□ -2.19
CBX4O00257 RNU6-94P-201ENST00000607728 107 ntBASIC1.4□□□□□ -2.19
CBX4O00257 uc_338.6-201ENST00000613544 171 ntBASIC1.4□□□□□ -2.19
CBX4O00257 AL035470.1-201ENST00000622571 220 ntBASIC1.4□□□□□ -2.19
CBX4O00257 AL162726.3-218ENST00000636401 95 ntBASIC1.4□□□□□ -2.19
CBX4O00257 MIR96-201ENST00000362288 78 ntBASIC1.39□□□□□ -2.19
CBX4O00257 Y_RNA.549-201ENST00000384657 102 ntBASIC1.39□□□□□ -2.19
CBX4O00257 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.39□□□□□ -2.19
CBX4O00257 SNORD83.1-201ENST00000411362 77 ntBASIC1.39□□□□□ -2.19
CBX4O00257 RNU7-2P-201ENST00000516096 62 ntBASIC1.39□□□□□ -2.19
CBX4O00257 RNU7-40P-201ENST00000516397 64 ntBASIC1.39□□□□□ -2.19
CBX4O00257 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CBX4O00257 MIR206-201ENST00000384872 86 ntBASIC1.38□□□□□ -2.19
CBX4O00257 RNU6-816P-201ENST00000390914 107 ntBASIC1.38□□□□□ -2.19
CBX4O00257 RNU6-1268P-201ENST00000391214 107 ntBASIC1.38□□□□□ -2.19
CBX4O00257 RNU6-1239P-201ENST00000391310 107 ntBASIC1.38□□□□□ -2.19
CBX4O00257 MIR1257-201ENST00000408490 117 ntBASIC1.38□□□□□ -2.19
CBX4O00257 RNU6-447P-201ENST00000410293 104 ntBASIC1.38□□□□□ -2.19
CBX4O00257 RNU6-1118P-201ENST00000410382 104 ntBASIC1.38□□□□□ -2.19
CBX4O00257 RNU6-1076P-201ENST00000410397 104 ntBASIC1.38□□□□□ -2.19
CBX4O00257 RNU6-355P-201ENST00000410427 104 ntBASIC1.38□□□□□ -2.19
CBX4O00257 RNU6-791P-201ENST00000410467 104 ntBASIC1.38□□□□□ -2.19
CBX4O00257 RNU6-705P-201ENST00000410601 104 ntBASIC1.38□□□□□ -2.19
CBX4O00257 RNU6-1100P-201ENST00000410691 104 ntBASIC1.38□□□□□ -2.19
CBX4O00257 RNU6-860P-201ENST00000410860 104 ntBASIC1.38□□□□□ -2.19
CBX4O00257 RNU6-1217P-201ENST00000411276 104 ntBASIC1.38□□□□□ -2.19
CBX4O00257 RNU6-785P-201ENST00000411324 104 ntBASIC1.38□□□□□ -2.19
CBX4O00257 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
CBX4O00257 RNU6-589P-201ENST00000516485 107 ntBASIC1.38□□□□□ -2.19
CBX4O00257 AC133485.1-201ENST00000567176 124 ntBASIC1.38□□□□□ -2.19
CBX4O00257 Y_RNA.773-201ENST00000607168 90 ntBASIC1.38□□□□□ -2.19
CBX4O00257 U6.90-201ENST00000614007 104 ntBASIC1.38□□□□□ -2.19
CBX4O00257 U6.70-201ENST00000620287 104 ntBASIC1.38□□□□□ -2.19
CBX4O00257 MIR1255B1-201ENST00000636325 63 ntBASIC1.38□□□□□ -2.19
CBX4O00257 AC023934.1-201ENST00000574529 2389 ntBASIC1.38□□□□□ -2.19
CBX4O00257 Y_RNA.85-201ENST00000363014 111 ntBASIC1.37□□□□□ -2.19
CBX4O00257 Y_RNA.155-201ENST00000363632 101 ntBASIC1.37□□□□□ -2.19
CBX4O00257 RNU4-67P-201ENST00000364569 141 ntBASIC1.37□□□□□ -2.19
CBX4O00257 SNORD20-201ENST00000384550 80 ntBASIC1.37□□□□□ -2.19
CBX4O00257 snoU13.21-201ENST00000459368 105 ntBASIC1.37□□□□□ -2.19
CBX4O00257 RNU6-919P-201ENST00000516731 104 ntBASIC1.37□□□□□ -2.19
CBX4O00257 Y_RNA.709-201ENST00000516952 92 ntBASIC1.37□□□□□ -2.19
CBX4O00257 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.37□□□□□ -2.19
CBX4O00257 MIR4771-2-201ENST00000577758 74 ntBASIC1.37□□□□□ -2.19
CBX4O00257 MIR4771-1-201ENST00000582617 74 ntBASIC1.37□□□□□ -2.19
CBX4O00257 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CBX4O00257 RNU6-363P-201ENST00000362895 105 ntBASIC1.36□□□□□ -2.19
CBX4O00257 SNORD115-35-201ENST00000365122 82 ntBASIC1.36□□□□□ -2.19
CBX4O00257 RNU6-215P-201ENST00000365169 102 ntBASIC1.36□□□□□ -2.19
CBX4O00257 MIR19B1-201ENST00000384829 87 ntBASIC1.36□□□□□ -2.19
CBX4O00257 SNORD93-201ENST00000408813 74 ntBASIC1.36□□□□□ -2.19
CBX4O00257 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
CBX4O00257 RMST_2.1-201ENST00000617263 136 ntBASIC1.36□□□□□ -2.19
CBX4O00257 SNORD114-27-201ENST00000363766 70 ntBASIC1.35□□□□□ -2.19
CBX4O00257 RNU6-865P-201ENST00000364772 107 ntBASIC1.35□□□□□ -2.19
CBX4O00257 RNU6-1107P-201ENST00000364817 104 ntBASIC1.35□□□□□ -2.19
CBX4O00257 RNU6-409P-201ENST00000384114 104 ntBASIC1.35□□□□□ -2.19
CBX4O00257 Y_RNA.448-201ENST00000384185 108 ntBASIC1.35□□□□□ -2.19
CBX4O00257 U8.15-201ENST00000390947 134 ntBASIC1.35□□□□□ -2.19
CBX4O00257 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.35□□□□□ -2.19
CBX4O00257 RPS26P5-201ENST00000418544 335 ntBASIC1.35□□□□□ -2.19
CBX4O00257 RNU7-185P-201ENST00000459215 60 ntBASIC1.35□□□□□ -2.19
CBX4O00257 RNU6-521P-201ENST00000516663 105 ntBASIC1.35□□□□□ -2.19
CBX4O00257 AC068339.1-201ENST00000526965 141 ntBASIC1.35□□□□□ -2.19
CBX4O00257 MIR6078-201ENST00000611069 100 ntBASIC1.35□□□□□ -2.19
CBX4O00257 AC105081.1-201ENST00000617727 106 ntBASIC1.35□□□□□ -2.19
CBX4O00257 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
CBX4O00257 Y_RNA.540-201ENST00000384638 111 ntBASIC1.34□□□□□ -2.19
CBX4O00257 MIR200A-201ENST00000384875 90 ntBASIC1.34□□□□□ -2.19
CBX4O00257 SNORA7.5-201ENST00000410672 110 ntBASIC1.34□□□□□ -2.19
CBX4O00257 RNU6-733P-201ENST00000410759 104 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 232.8 ms