Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 MIR548I2-201ENST00000408348 149 ntBASIC0.87□□□□□ -2.27
SMCHD1A6NHR9 RPS26P5-201ENST00000418544 335 ntBASIC0.87□□□□□ -2.27
SMCHD1A6NHR9 Y_RNA.651-201ENST00000459380 103 ntBASIC0.87□□□□□ -2.27
SMCHD1A6NHR9 Y_RNA.690-201ENST00000516603 95 ntBASIC0.87□□□□□ -2.27
SMCHD1A6NHR9 Y_RNA.507-201ENST00000384500 99 ntBASIC0.86□□□□□ -2.27
SMCHD1A6NHR9 MIR759-201ENST00000390224 91 ntBASIC0.86□□□□□ -2.27
SMCHD1A6NHR9 SNORD37.2-201ENST00000391075 66 ntBASIC0.86□□□□□ -2.27
SMCHD1A6NHR9 RNU6-1190P-201ENST00000410811 104 ntBASIC0.86□□□□□ -2.27
SMCHD1A6NHR9 RNU6-1086P-201ENST00000410930 100 ntBASIC0.86□□□□□ -2.27
SMCHD1A6NHR9 AC106800.4-201ENST00000614905 153 ntBASIC0.86□□□□□ -2.27
SMCHD1A6NHR9 SNORD115-19-201ENST00000363098 82 ntBASIC0.86□□□□□ -2.27
SMCHD1A6NHR9 SNORD115-18-201ENST00000363293 82 ntBASIC0.86□□□□□ -2.27
SMCHD1A6NHR9 SNORD115-17-201ENST00000364612 82 ntBASIC0.86□□□□□ -2.27
SMCHD1A6NHR9 RNU6-1325P-201ENST00000364905 105 ntBASIC0.86□□□□□ -2.27
SMCHD1A6NHR9 RNU6-915P-201ENST00000364943 103 ntBASIC0.86□□□□□ -2.27
SMCHD1A6NHR9 SNORA19-201ENST00000384737 128 ntBASIC0.86□□□□□ -2.27
SMCHD1A6NHR9 MIR605-201ENST00000385078 83 ntBASIC0.86□□□□□ -2.27
SMCHD1A6NHR9 MIR125B2-201ENST00000385128 89 ntBASIC0.86□□□□□ -2.27
SMCHD1A6NHR9 MIR1912-201ENST00000410389 80 ntBASIC0.86□□□□□ -2.27
SMCHD1A6NHR9 RNU6-1144P-201ENST00000384247 104 ntBASIC0.85□□□□□ -2.27
SMCHD1A6NHR9 AL512326.2-201ENST00000426359 151 ntBASIC0.85□□□□□ -2.27
SMCHD1A6NHR9 SUMO1P3-201ENST00000439961 304 ntBASIC0.85□□□□□ -2.27
SMCHD1A6NHR9 U7.7-201ENST00000459276 60 ntBASIC0.85□□□□□ -2.27
SMCHD1A6NHR9 RNU7-45P-201ENST00000459460 63 ntBASIC0.85□□□□□ -2.27
SMCHD1A6NHR9 AC133485.1-201ENST00000567176 124 ntBASIC0.85□□□□□ -2.27
SMCHD1A6NHR9 AL162726.3-218ENST00000636401 95 ntBASIC0.85□□□□□ -2.27
SMCHD1A6NHR9 MIR216A-201ENST00000385063 110 ntBASIC0.84□□□□□ -2.27
SMCHD1A6NHR9 RNU6-1061P-201ENST00000516530 99 ntBASIC0.84□□□□□ -2.27
SMCHD1A6NHR9 RNU6-971P-201ENST00000516920 106 ntBASIC0.84□□□□□ -2.27
SMCHD1A6NHR9 MIR6129-201ENST00000616087 109 ntBASIC0.84□□□□□ -2.27
SMCHD1A6NHR9 RNA5SP133-201ENST00000363368 119 ntBASIC0.84□□□□□ -2.28
SMCHD1A6NHR9 RNA5SP499-201ENST00000363982 119 ntBASIC0.84□□□□□ -2.28
SMCHD1A6NHR9 RNU6-535P-201ENST00000384722 107 ntBASIC0.84□□□□□ -2.28
SMCHD1A6NHR9 AL603908.1-201ENST00000406098 201 ntBASIC0.84□□□□□ -2.28
SMCHD1A6NHR9 RNA5SP136-201ENST00000410906 107 ntBASIC0.84□□□□□ -2.28
SMCHD1A6NHR9 MRPL35P3-201ENST00000421557 364 ntBASIC0.84□□□□□ -2.28
SMCHD1A6NHR9 RNU6-346P-201ENST00000516288 111 ntBASIC0.84□□□□□ -2.28
SMCHD1A6NHR9 AP001328.1-201ENST00000528550 176 ntBASIC0.84□□□□□ -2.28
SMCHD1A6NHR9 AC132825.6-201ENST00000638861 357 ntBASIC0.84□□□□□ -2.28
SMCHD1A6NHR9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.83□□□□□ -2.28
SMCHD1A6NHR9 SNORA63.5-201ENST00000363548 123 ntBASIC0.83□□□□□ -2.28
SMCHD1A6NHR9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.83□□□□□ -2.28
SMCHD1A6NHR9 MTATP6P21-201ENST00000440681 189 ntBASIC0.83□□□□□ -2.28
SMCHD1A6NHR9 AC008267.6-201ENST00000441664 139 ntBASIC0.83□□□□□ -2.28
SMCHD1A6NHR9 RNU7-79P-201ENST00000516082 62 ntBASIC0.83□□□□□ -2.28
SMCHD1A6NHR9 RNU7-40P-201ENST00000516397 64 ntBASIC0.83□□□□□ -2.28
SMCHD1A6NHR9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
SMCHD1A6NHR9 Y_RNA.344-201ENST00000365381 112 ntBASIC0.82□□□□□ -2.28
SMCHD1A6NHR9 MIR520F-201ENST00000384824 87 ntBASIC0.82□□□□□ -2.28
SMCHD1A6NHR9 SNORD105-201ENST00000386910 85 ntBASIC0.82□□□□□ -2.28
SMCHD1A6NHR9 RNA5SP237-201ENST00000410414 113 ntBASIC0.82□□□□□ -2.28
SMCHD1A6NHR9 MIR2115-201ENST00000516657 100 ntBASIC0.82□□□□□ -2.28
SMCHD1A6NHR9 AC138749.4-201ENST00000563970 127 ntBASIC0.82□□□□□ -2.28
SMCHD1A6NHR9 SNORD92-201ENST00000585078 85 ntBASIC0.82□□□□□ -2.28
SMCHD1A6NHR9 AC087741.2-201ENST00000619415 172 ntBASIC0.82□□□□□ -2.28
SMCHD1A6NHR9 RNU4-58P-201ENST00000363192 141 ntBASIC0.82□□□□□ -2.28
SMCHD1A6NHR9 Y_RNA.521-201ENST00000384560 114 ntBASIC0.82□□□□□ -2.28
SMCHD1A6NHR9 MIR1827-201ENST00000408549 66 ntBASIC0.82□□□□□ -2.28
SMCHD1A6NHR9 RNU7-53P-201ENST00000516705 60 ntBASIC0.82□□□□□ -2.28
SMCHD1A6NHR9 AL590095.2-201ENST00000604136 117 ntBASIC0.82□□□□□ -2.28
SMCHD1A6NHR9 RNU6-235P-201ENST00000362644 107 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 Y_RNA.171-201ENST00000363760 102 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 SNORA22C-201ENST00000384614 134 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 MIR569-201ENST00000385228 96 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 MIRLET7F2-201ENST00000385277 83 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 FABP5P4-201ENST00000437203 171 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 RNU7-48P-201ENST00000458875 63 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 RNU6-406P-201ENST00000516470 107 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 RNU6-62P-201ENST00000516526 102 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 MIR1273G-201ENST00000577677 100 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 MIR4661-201ENST00000582720 75 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 AL359881.1-201ENST00000602916 267 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 Y_RNA.213-201ENST00000364178 111 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 Y_RNA.528-201ENST00000384575 108 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 RNU6-1165P-201ENST00000410119 107 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 MIR3133-201ENST00000583157 78 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 AC025166.1-201ENST00000612411 163 ntBASIC0.81□□□□□ -2.28
SMCHD1A6NHR9 MIR330-201ENST00000362196 94 ntBASIC0.8□□□□□ -2.28
SMCHD1A6NHR9 Y_RNA.30-201ENST00000362572 97 ntBASIC0.8□□□□□ -2.28
SMCHD1A6NHR9 Y_RNA.298-201ENST00000364960 107 ntBASIC0.8□□□□□ -2.28
SMCHD1A6NHR9 SNORD115-35-201ENST00000365122 82 ntBASIC0.8□□□□□ -2.28
SMCHD1A6NHR9 RNU6-934P-201ENST00000365154 107 ntBASIC0.8□□□□□ -2.28
SMCHD1A6NHR9 SNORD93-201ENST00000408813 74 ntBASIC0.8□□□□□ -2.28
SMCHD1A6NHR9 RNU6-994P-201ENST00000410507 111 ntBASIC0.8□□□□□ -2.28
SMCHD1A6NHR9 AC244098.3-201ENST00000424803 96 ntBASIC0.8□□□□□ -2.28
SMCHD1A6NHR9 COX6CP6-201ENST00000490840 228 ntBASIC0.8□□□□□ -2.28
SMCHD1A6NHR9 AC022523.2-201ENST00000561045 150 ntBASIC0.8□□□□□ -2.28
SMCHD1A6NHR9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SMCHD1A6NHR9 RNU6-832P-201ENST00000363319 107 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 SNORD58C-201ENST00000365223 64 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 RNU6-1117P-201ENST00000384525 104 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 RNU6-939P-201ENST00000384634 107 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 MIR1257-201ENST00000408490 117 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 RNU6-447P-201ENST00000410293 104 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 RNU6-1118P-201ENST00000410382 104 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 RNU6-1076P-201ENST00000410397 104 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 RNU6-355P-201ENST00000410427 104 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 RNU6-791P-201ENST00000410467 104 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 RNU6-705P-201ENST00000410601 104 ntBASIC0.79□□□□□ -2.28
SMCHD1A6NHR9 RNU6-1100P-201ENST00000410691 104 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms