Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RNU7-10P-201ENST00000607194 63 ntBASIC2.68□□□□□ -1.98
RCCD1A6NED2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
RCCD1A6NED2 SNORA6-201ENST00000384033 151 ntBASIC2.67□□□□□ -1.98
RCCD1A6NED2 AC074348.1-201ENST00000426503 132 ntBASIC2.67□□□□□ -1.98
RCCD1A6NED2 RNU6-687P-201ENST00000516443 89 ntBASIC2.67□□□□□ -1.98
RCCD1A6NED2 RNA5SP402-201ENST00000517148 110 ntBASIC2.67□□□□□ -1.98
RCCD1A6NED2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
RCCD1A6NED2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
RCCD1A6NED2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RCCD1A6NED2 RNU1-36P-201ENST00000365130 165 ntBASIC2.66□□□□□ -1.98
RCCD1A6NED2 MIR1185-1-201ENST00000408598 86 ntBASIC2.66□□□□□ -1.98
RCCD1A6NED2 MIR6852-201ENST00000621699 66 ntBASIC2.66□□□□□ -1.98
RCCD1A6NED2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
RCCD1A6NED2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
RCCD1A6NED2 AL596028.1-201ENST00000326971 197 ntBASIC2.65□□□□□ -1.99
RCCD1A6NED2 MIR103A2-201ENST00000362154 78 ntBASIC2.65□□□□□ -1.99
RCCD1A6NED2 MIR101-2-201ENST00000362195 79 ntBASIC2.65□□□□□ -1.99
RCCD1A6NED2 RNA5SP276-201ENST00000362580 94 ntBASIC2.65□□□□□ -1.99
RCCD1A6NED2 RNU6-403P-201ENST00000363163 104 ntBASIC2.65□□□□□ -1.99
RCCD1A6NED2 RNA5SP456-201ENST00000364002 114 ntBASIC2.65□□□□□ -1.99
RCCD1A6NED2 RNU6-580P-201ENST00000365159 107 ntBASIC2.65□□□□□ -1.99
RCCD1A6NED2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RCCD1A6NED2 SNORD100-201ENST00000408573 76 ntBASIC2.65□□□□□ -1.99
RCCD1A6NED2 RNA5SP356-201ENST00000515972 94 ntBASIC2.65□□□□□ -1.99
RCCD1A6NED2 SNORA77B-201ENST00000578179 125 ntBASIC2.65□□□□□ -1.99
RCCD1A6NED2 YWHAEP2-201ENST00000580066 112 ntBASIC2.65□□□□□ -1.99
RCCD1A6NED2 MIR548H5-201ENST00000580314 60 ntBASIC2.65□□□□□ -1.99
RCCD1A6NED2 YWHAEP3-201ENST00000582767 121 ntBASIC2.65□□□□□ -1.99
RCCD1A6NED2 SNRPGP19-201ENST00000603826 189 ntBASIC2.65□□□□□ -1.99
RCCD1A6NED2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.65□□□□□ -1.99
RCCD1A6NED2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.99
RCCD1A6NED2 Y_RNA.12-201ENST00000362393 112 ntBASIC2.64□□□□□ -1.99
RCCD1A6NED2 RNA5SP264-201ENST00000363115 107 ntBASIC2.64□□□□□ -1.99
RCCD1A6NED2 Y_RNA.340-201ENST00000365330 92 ntBASIC2.64□□□□□ -1.99
RCCD1A6NED2 Y_RNA.500-201ENST00000384466 111 ntBASIC2.64□□□□□ -1.99
RCCD1A6NED2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
RCCD1A6NED2 Y_RNA.536-201ENST00000384621 113 ntBASIC2.63□□□□□ -1.99
RCCD1A6NED2 MIR519A1-201ENST00000385257 85 ntBASIC2.63□□□□□ -1.99
RCCD1A6NED2 RNU6-587P-201ENST00000391282 106 ntBASIC2.63□□□□□ -1.99
RCCD1A6NED2 UBE2DNL-203ENST00000474922 222 ntBASIC2.63□□□□□ -1.99
RCCD1A6NED2 AC245884.12-201ENST00000615364 59 ntBASIC2.63□□□□□ -1.99
RCCD1A6NED2 U4.3-201ENST00000621047 82 ntBASIC2.63□□□□□ -1.99
RCCD1A6NED2 RNU6-654P-201ENST00000364373 107 ntBASIC2.62□□□□□ -1.99
RCCD1A6NED2 RNU6-649P-201ENST00000384463 107 ntBASIC2.62□□□□□ -1.99
RCCD1A6NED2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
RCCD1A6NED2 SNORD90-201ENST00000391145 111 ntBASIC2.62□□□□□ -1.99
RCCD1A6NED2 SNORD23.1-201ENST00000408212 104 ntBASIC2.62□□□□□ -1.99
RCCD1A6NED2 TRAJ51-201ENST00000504127 63 ntBASIC2.62□□□□□ -1.99
RCCD1A6NED2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
RCCD1A6NED2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RCCD1A6NED2 RNA5SP184-201ENST00000411071 108 ntBASIC2.61□□□□□ -1.99
RCCD1A6NED2 RNU7-195P-201ENST00000458793 62 ntBASIC2.61□□□□□ -1.99
RCCD1A6NED2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
RCCD1A6NED2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
RCCD1A6NED2 Y_RNA.239-201ENST00000364444 113 ntBASIC2.6□□□□□ -1.99
RCCD1A6NED2 RNY4P3-201ENST00000365254 95 ntBASIC2.6□□□□□ -1.99
RCCD1A6NED2 MIR524-201ENST00000385242 87 ntBASIC2.6□□□□□ -1.99
RCCD1A6NED2 RNA5SP95-201ENST00000410319 137 ntBASIC2.6□□□□□ -1.99
RCCD1A6NED2 Y_RNA.596-201ENST00000410462 109 ntBASIC2.6□□□□□ -1.99
RCCD1A6NED2 Y_RNA.809-201ENST00000516058 95 ntBASIC2.6□□□□□ -1.99
RCCD1A6NED2 RNA5SP320-201ENST00000516263 124 ntBASIC2.6□□□□□ -1.99
RCCD1A6NED2 MIR4319-201ENST00000577285 85 ntBASIC2.6□□□□□ -1.99
RCCD1A6NED2 MIR4513-201ENST00000581077 86 ntBASIC2.6□□□□□ -1.99
RCCD1A6NED2 AC013244.2-201ENST00000603396 103 ntBASIC2.6□□□□□ -1.99
RCCD1A6NED2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.6□□□□□ -1.99
RCCD1A6NED2 MIR8074-201ENST00000615081 81 ntBASIC2.6□□□□□ -1.99
RCCD1A6NED2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RCCD1A6NED2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RCCD1A6NED2 Y_RNA.56-201ENST00000362798 112 ntBASIC2.59□□□□□ -1.99
RCCD1A6NED2 RNU6-1051P-201ENST00000365471 102 ntBASIC2.59□□□□□ -1.99
RCCD1A6NED2 U8.13-201ENST00000390842 128 ntBASIC2.59□□□□□ -1.99
RCCD1A6NED2 SNORD109B-201ENST00000458961 67 ntBASIC2.59□□□□□ -1.99
RCCD1A6NED2 SNORD109A-201ENST00000459128 67 ntBASIC2.59□□□□□ -1.99
RCCD1A6NED2 AL773524.1-201ENST00000614065 229 ntBASIC2.59□□□□□ -1.99
RCCD1A6NED2 TRDV1-202ENST00000621643 102 ntBASIC2.59□□□□□ -1.99
RCCD1A6NED2 MIR664A-201ENST00000626086 82 ntBASIC2.59□□□□□ -1.99
RCCD1A6NED2 AL359851.1-201ENST00000569460 4997 ntBASIC2.58□□□□□ -2
RCCD1A6NED2 ZNF658B-202ENST00000615961 3375 ntBASIC2.58□□□□□ -2
RCCD1A6NED2 RNU6-1260P-201ENST00000362944 107 ntBASIC2.58□□□□□ -2
RCCD1A6NED2 RPS27P16-201ENST00000425758 201 ntBASIC2.58□□□□□ -2
RCCD1A6NED2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.58□□□□□ -2
RCCD1A6NED2 AC062016.1-201ENST00000355719 319 ntBASIC2.57□□□□□ -2
RCCD1A6NED2 Y_RNA.42-201ENST00000362660 108 ntBASIC2.57□□□□□ -2
RCCD1A6NED2 RNU6-859P-201ENST00000362728 107 ntBASIC2.57□□□□□ -2
RCCD1A6NED2 SNORA8.1-201ENST00000384250 140 ntBASIC2.57□□□□□ -2
RCCD1A6NED2 MIR27B-201ENST00000385129 97 ntBASIC2.57□□□□□ -2
RCCD1A6NED2 RNU2-59P-201ENST00000410482 191 ntBASIC2.57□□□□□ -2
RCCD1A6NED2 AC244636.1-201ENST00000421152 228 ntBASIC2.57□□□□□ -2
RCCD1A6NED2 snoU13.17-201ENST00000458802 104 ntBASIC2.57□□□□□ -2
RCCD1A6NED2 RNU7-185P-201ENST00000459215 60 ntBASIC2.57□□□□□ -2
RCCD1A6NED2 MIR3162-201ENST00000581818 82 ntBASIC2.57□□□□□ -2
RCCD1A6NED2 MIR4672-201ENST00000583126 81 ntBASIC2.57□□□□□ -2
RCCD1A6NED2 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.57□□□□□ -2
RCCD1A6NED2 AC023934.1-201ENST00000574529 2389 ntBASIC2.57□□□□□ -2
RCCD1A6NED2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RCCD1A6NED2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.56□□□□□ -2
RCCD1A6NED2 Y_RNA.36-201ENST00000362602 112 ntBASIC2.56□□□□□ -2
RCCD1A6NED2 MIR196B-201ENST00000384852 84 ntBASIC2.56□□□□□ -2
RCCD1A6NED2 SNORD30.1-201ENST00000391309 70 ntBASIC2.56□□□□□ -2
RCCD1A6NED2 MIR1257-201ENST00000408490 117 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms