Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MIR3179-4-201ENST00000617599 84 ntBASIC-1.15□□□□□ -2.59
TCRBV4S1A1TA0A5B7 SNORD114-25-201ENST00000363742 72 ntBASIC-1.16□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.16□□□□□ -2.6
TCRBV4S1A1TA0A5B7 SNORA49-201ENST00000386157 136 ntBASIC-1.16□□□□□ -2.6
TCRBV4S1A1TA0A5B7 RNU6-130P-201ENST00000411112 103 ntBASIC-1.16□□□□□ -2.6
TCRBV4S1A1TA0A5B7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.16□□□□□ -2.6
TCRBV4S1A1TA0A5B7 HSPE1P25-201ENST00000455484 251 ntBASIC-1.16□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.16□□□□□ -2.6
TCRBV4S1A1TA0A5B7 U8.20-201ENST00000459445 131 ntBASIC-1.16□□□□□ -2.6
TCRBV4S1A1TA0A5B7 SNORA27.4-201ENST00000516650 95 ntBASIC-1.16□□□□□ -2.6
TCRBV4S1A1TA0A5B7 SCARNA15-202ENST00000516881 127 ntBASIC-1.16□□□□□ -2.6
TCRBV4S1A1TA0A5B7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.16□□□□□ -2.6
TCRBV4S1A1TA0A5B7 MIR548AE2-201ENST00000583456 67 ntBASIC-1.16□□□□□ -2.6
TCRBV4S1A1TA0A5B7 MIR4320-201ENST00000636981 65 ntBASIC-1.16□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.17□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.17□□□□□ -2.6
TCRBV4S1A1TA0A5B7 MT-TY-201ENST00000387409 66 ntBASIC-1.17□□□□□ -2.6
TCRBV4S1A1TA0A5B7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
TCRBV4S1A1TA0A5B7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
TCRBV4S1A1TA0A5B7 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.17□□□□□ -2.6
TCRBV4S1A1TA0A5B7 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.17□□□□□ -2.6
TCRBV4S1A1TA0A5B7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.17□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.17□□□□□ -2.6
TCRBV4S1A1TA0A5B7 MIR4324-201ENST00000584846 72 ntBASIC-1.17□□□□□ -2.6
TCRBV4S1A1TA0A5B7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.17□□□□□ -2.6
TCRBV4S1A1TA0A5B7 SNORD113-8-201ENST00000363497 74 ntBASIC-1.18□□□□□ -2.6
TCRBV4S1A1TA0A5B7 MIR518B-201ENST00000385127 83 ntBASIC-1.18□□□□□ -2.6
TCRBV4S1A1TA0A5B7 MT-TT-201ENST00000387460 66 ntBASIC-1.18□□□□□ -2.6
TCRBV4S1A1TA0A5B7 AC244090.1-201ENST00000441884 93 ntBASIC-1.18□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.18□□□□□ -2.6
TCRBV4S1A1TA0A5B7 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.18□□□□□ -2.6
TCRBV4S1A1TA0A5B7 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.18□□□□□ -2.6
TCRBV4S1A1TA0A5B7 MIR5690-201ENST00000583739 73 ntBASIC-1.18□□□□□ -2.6
TCRBV4S1A1TA0A5B7 RPS29P30-201ENST00000600975 111 ntBASIC-1.18□□□□□ -2.6
TCRBV4S1A1TA0A5B7 PART1_1.1-201ENST00000611761 217 ntBASIC-1.18□□□□□ -2.6
TCRBV4S1A1TA0A5B7 U4.1-201ENST00000620349 87 ntBASIC-1.18□□□□□ -2.6
TCRBV4S1A1TA0A5B7 SNORD115-25-201ENST00000362619 82 ntBASIC-1.19□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.19□□□□□ -2.6
TCRBV4S1A1TA0A5B7 SNORA51.5-201ENST00000384126 131 ntBASIC-1.19□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.19□□□□□ -2.6
TCRBV4S1A1TA0A5B7 MIR2113-201ENST00000459007 91 ntBASIC-1.19□□□□□ -2.6
TCRBV4S1A1TA0A5B7 MIR1270-201ENST00000459320 83 ntBASIC-1.19□□□□□ -2.6
TCRBV4S1A1TA0A5B7 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.19□□□□□ -2.6
TCRBV4S1A1TA0A5B7 SNORD22.1-201ENST00000516331 125 ntBASIC-1.19□□□□□ -2.6
TCRBV4S1A1TA0A5B7 RNU7-30P-201ENST00000516835 62 ntBASIC-1.19□□□□□ -2.6
TCRBV4S1A1TA0A5B7 AC245505.1-201ENST00000556398 224 ntBASIC-1.19□□□□□ -2.6
TCRBV4S1A1TA0A5B7 RNU6-170P-201ENST00000362832 104 ntBASIC-1.2□□□□□ -2.6
TCRBV4S1A1TA0A5B7 RNY1P6-201ENST00000384193 109 ntBASIC-1.2□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.2□□□□□ -2.6
TCRBV4S1A1TA0A5B7 RNU6-662P-201ENST00000384253 104 ntBASIC-1.2□□□□□ -2.6
TCRBV4S1A1TA0A5B7 AL731563.1-201ENST00000442202 214 ntBASIC-1.2□□□□□ -2.6
TCRBV4S1A1TA0A5B7 AL500527.2-201ENST00000454105 95 ntBASIC-1.2□□□□□ -2.6
TCRBV4S1A1TA0A5B7 AC082651.2-201ENST00000496833 166 ntBASIC-1.2□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.2□□□□□ -2.6
TCRBV4S1A1TA0A5B7 MIR3908-201ENST00000579798 126 ntBASIC-1.2□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.21□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.21□□□□□ -2.6
TCRBV4S1A1TA0A5B7 MIR517B-201ENST00000385102 67 ntBASIC-1.21□□□□□ -2.6
TCRBV4S1A1TA0A5B7 MIR652-201ENST00000385278 98 ntBASIC-1.21□□□□□ -2.6
TCRBV4S1A1TA0A5B7 AC016907.1-201ENST00000419483 435 ntBASIC-1.21□□□□□ -2.6
TCRBV4S1A1TA0A5B7 RNU7-48P-201ENST00000458875 63 ntBASIC-1.21□□□□□ -2.6
TCRBV4S1A1TA0A5B7 RNU7-106P-201ENST00000459514 67 ntBASIC-1.21□□□□□ -2.6
TCRBV4S1A1TA0A5B7 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.21□□□□□ -2.6
TCRBV4S1A1TA0A5B7 RNU6-570P-201ENST00000517051 105 ntBASIC-1.21□□□□□ -2.6
TCRBV4S1A1TA0A5B7 SNORA40.17-201ENST00000517256 115 ntBASIC-1.21□□□□□ -2.6
TCRBV4S1A1TA0A5B7 AC093783.1-201ENST00000612976 329 ntBASIC-1.21□□□□□ -2.6
TCRBV4S1A1TA0A5B7 snoU18.1-201ENST00000629629 71 ntBASIC-1.21□□□□□ -2.6
TCRBV4S1A1TA0A5B7 MIR3688-2-201ENST00000636963 87 ntBASIC-1.21□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.22□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.22□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.22□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.22□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.22□□□□□ -2.6
TCRBV4S1A1TA0A5B7 AC022137.1-201ENST00000483735 151 ntBASIC-1.22□□□□□ -2.6
TCRBV4S1A1TA0A5B7 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.22□□□□□ -2.6
TCRBV4S1A1TA0A5B7 MIR5704-201ENST00000584029 77 ntBASIC-1.22□□□□□ -2.6
TCRBV4S1A1TA0A5B7 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.23□□□□□ -2.61
TCRBV4S1A1TA0A5B7 RNU6-973P-201ENST00000364690 107 ntBASIC-1.23□□□□□ -2.61
TCRBV4S1A1TA0A5B7 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.23□□□□□ -2.61
TCRBV4S1A1TA0A5B7 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.23□□□□□ -2.61
TCRBV4S1A1TA0A5B7 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.23□□□□□ -2.61
TCRBV4S1A1TA0A5B7 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.23□□□□□ -2.61
TCRBV4S1A1TA0A5B7 AL606845.1-201ENST00000404881 255 ntBASIC-1.23□□□□□ -2.61
TCRBV4S1A1TA0A5B7 SNORA40.14-201ENST00000516543 86 ntBASIC-1.23□□□□□ -2.61
TCRBV4S1A1TA0A5B7 AC007012.1-201ENST00000567192 175 ntBASIC-1.23□□□□□ -2.61
TCRBV4S1A1TA0A5B7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.23□□□□□ -2.61
TCRBV4S1A1TA0A5B7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.23□□□□□ -2.61
TCRBV4S1A1TA0A5B7 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.24□□□□□ -2.61
TCRBV4S1A1TA0A5B7 RNU4-90P-201ENST00000362773 141 ntBASIC-1.24□□□□□ -2.61
TCRBV4S1A1TA0A5B7 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.24□□□□□ -2.61
TCRBV4S1A1TA0A5B7 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.24□□□□□ -2.61
TCRBV4S1A1TA0A5B7 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.24□□□□□ -2.61
TCRBV4S1A1TA0A5B7 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.24□□□□□ -2.61
TCRBV4S1A1TA0A5B7 MIR206-201ENST00000384872 86 ntBASIC-1.24□□□□□ -2.61
TCRBV4S1A1TA0A5B7 MIR1468-201ENST00000410600 86 ntBASIC-1.24□□□□□ -2.61
TCRBV4S1A1TA0A5B7 AP000533.3-201ENST00000447704 118 ntBASIC-1.24□□□□□ -2.61
TCRBV4S1A1TA0A5B7 RNU6-287P-201ENST00000516230 98 ntBASIC-1.24□□□□□ -2.61
TCRBV4S1A1TA0A5B7 RNU6-453P-201ENST00000516819 85 ntBASIC-1.24□□□□□ -2.61
TCRBV4S1A1TA0A5B7 SNORD116.3-201ENST00000517176 78 ntBASIC-1.24□□□□□ -2.61
TCRBV4S1A1TA0A5B7 uc_338.19-201ENST00000616808 99 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms