Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 RNA5SP117-201ENST00000365294 118 ntBASIC0.46□□□□□ -2.34
TRBV4-1A0A0J9YWV2 Y_RNA.400-201ENST00000383963 111 ntBASIC0.46□□□□□ -2.34
TRBV4-1A0A0J9YWV2 MIR513C-201ENST00000401352 84 ntBASIC0.46□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNU4-69P-201ENST00000410677 143 ntBASIC0.46□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNU6-1194P-201ENST00000516208 104 ntBASIC0.46□□□□□ -2.34
TRBV4-1A0A0J9YWV2 SNORD67.1-201ENST00000516618 108 ntBASIC0.46□□□□□ -2.34
TRBV4-1A0A0J9YWV2 SNORA25.16-201ENST00000516741 121 ntBASIC0.46□□□□□ -2.34
TRBV4-1A0A0J9YWV2 MIR548X2-201ENST00000579776 100 ntBASIC0.46□□□□□ -2.34
TRBV4-1A0A0J9YWV2 AL359881.1-201ENST00000602916 267 ntBASIC0.46□□□□□ -2.34
TRBV4-1A0A0J9YWV2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.46□□□□□ -2.34
TRBV4-1A0A0J9YWV2 AL137067.1-201ENST00000615933 120 ntBASIC0.46□□□□□ -2.34
TRBV4-1A0A0J9YWV2 uc_338.17-201ENST00000619633 179 ntBASIC0.46□□□□□ -2.34
TRBV4-1A0A0J9YWV2 uc_338.16-201ENST00000621804 95 ntBASIC0.46□□□□□ -2.34
TRBV4-1A0A0J9YWV2 AP001340.1-201ENST00000624405 217 ntBASIC0.46□□□□□ -2.34
TRBV4-1A0A0J9YWV2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.45□□□□□ -2.34
TRBV4-1A0A0J9YWV2 SNORD114-10-201ENST00000363409 72 ntBASIC0.45□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNU6-915P-201ENST00000364943 103 ntBASIC0.45□□□□□ -2.34
TRBV4-1A0A0J9YWV2 SNORA72.6-201ENST00000384520 129 ntBASIC0.45□□□□□ -2.34
TRBV4-1A0A0J9YWV2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.45□□□□□ -2.34
TRBV4-1A0A0J9YWV2 AL603825.1-201ENST00000438481 80 ntBASIC0.45□□□□□ -2.34
TRBV4-1A0A0J9YWV2 MIR3678-201ENST00000578455 94 ntBASIC0.45□□□□□ -2.34
TRBV4-1A0A0J9YWV2 Y_RNA.8-201ENST00000362353 102 ntBASIC0.44□□□□□ -2.34
TRBV4-1A0A0J9YWV2 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
TRBV4-1A0A0J9YWV2 Y_RNA.180-201ENST00000363867 113 ntBASIC0.44□□□□□ -2.34
TRBV4-1A0A0J9YWV2 SNORA25.12-201ENST00000516202 82 ntBASIC0.44□□□□□ -2.34
TRBV4-1A0A0J9YWV2 Y_RNA.692-201ENST00000516627 105 ntBASIC0.44□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNY4P20-201ENST00000516678 93 ntBASIC0.44□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNA5SP94-201ENST00000516917 108 ntBASIC0.44□□□□□ -2.34
TRBV4-1A0A0J9YWV2 MTND5P41-201ENST00000517498 206 ntBASIC0.44□□□□□ -2.34
TRBV4-1A0A0J9YWV2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
TRBV4-1A0A0J9YWV2 Y_RNA.174-201ENST00000363781 105 ntBASIC0.43□□□□□ -2.34
TRBV4-1A0A0J9YWV2 Y_RNA.215-201ENST00000364204 112 ntBASIC0.43□□□□□ -2.34
TRBV4-1A0A0J9YWV2 Y_RNA.464-201ENST00000384282 110 ntBASIC0.43□□□□□ -2.34
TRBV4-1A0A0J9YWV2 Y_RNA.536-201ENST00000384621 113 ntBASIC0.43□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNU6-291P-201ENST00000384720 107 ntBASIC0.43□□□□□ -2.34
TRBV4-1A0A0J9YWV2 MIR569-201ENST00000385228 96 ntBASIC0.43□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNU6-1212P-201ENST00000517023 104 ntBASIC0.43□□□□□ -2.34
TRBV4-1A0A0J9YWV2 AC022523.2-201ENST00000561045 150 ntBASIC0.43□□□□□ -2.34
TRBV4-1A0A0J9YWV2 AC138749.4-201ENST00000563970 127 ntBASIC0.43□□□□□ -2.34
TRBV4-1A0A0J9YWV2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
TRBV4-1A0A0J9YWV2 AC092634.7-201ENST00000621022 103 ntBASIC0.43□□□□□ -2.34
TRBV4-1A0A0J9YWV2 AC021753.1-201ENST00000635724 168 ntBASIC0.43□□□□□ -2.34
TRBV4-1A0A0J9YWV2 Y_RNA.32-201ENST00000362589 110 ntBASIC0.42□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNY1P10-201ENST00000363268 113 ntBASIC0.42□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNA5SP133-201ENST00000363368 119 ntBASIC0.42□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNA5SP517-201ENST00000364724 117 ntBASIC0.42□□□□□ -2.34
TRBV4-1A0A0J9YWV2 Y_RNA.280-201ENST00000364765 112 ntBASIC0.42□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNU6-1104P-201ENST00000384723 104 ntBASIC0.42□□□□□ -2.34
TRBV4-1A0A0J9YWV2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNU6-679P-201ENST00000391003 106 ntBASIC0.42□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNU5E-3P-201ENST00000515913 68 ntBASIC0.42□□□□□ -2.34
TRBV4-1A0A0J9YWV2 SNORA31.14-201ENST00000516728 116 ntBASIC0.42□□□□□ -2.34
TRBV4-1A0A0J9YWV2 IGKV1-22-201ENST00000524313 326 ntBASIC0.42□□□□□ -2.34
TRBV4-1A0A0J9YWV2 AP001328.1-201ENST00000528550 176 ntBASIC0.42□□□□□ -2.34
TRBV4-1A0A0J9YWV2 MTND5P34-201ENST00000568888 325 ntBASIC0.42□□□□□ -2.34
TRBV4-1A0A0J9YWV2 MIR4714-201ENST00000580728 77 ntBASIC0.42□□□□□ -2.34
TRBV4-1A0A0J9YWV2 MIR4298-201ENST00000584380 73 ntBASIC0.42□□□□□ -2.34
TRBV4-1A0A0J9YWV2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.42□□□□□ -2.34
TRBV4-1A0A0J9YWV2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.41□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNA5SP432-201ENST00000362480 116 ntBASIC0.41□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNU4-58P-201ENST00000363192 141 ntBASIC0.41□□□□□ -2.34
TRBV4-1A0A0J9YWV2 Y_RNA.338-201ENST00000365320 114 ntBASIC0.41□□□□□ -2.34
TRBV4-1A0A0J9YWV2 Y_RNA.420-201ENST00000384043 110 ntBASIC0.41□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNU6-1053P-201ENST00000515930 101 ntBASIC0.41□□□□□ -2.34
TRBV4-1A0A0J9YWV2 RNU6-531P-201ENST00000516694 104 ntBASIC0.41□□□□□ -2.34
TRBV4-1A0A0J9YWV2 Y_RNA.697-201ENST00000516776 113 ntBASIC0.41□□□□□ -2.34
TRBV4-1A0A0J9YWV2 U6.109-201ENST00000636749 87 ntBASIC0.41□□□□□ -2.34
TRBV4-1A0A0J9YWV2 Y_RNA.114-201ENST00000363265 113 ntBASIC0.4□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNY1P2-201ENST00000364820 117 ntBASIC0.4□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNU6-535P-201ENST00000384722 107 ntBASIC0.4□□□□□ -2.35
TRBV4-1A0A0J9YWV2 MIR644A-201ENST00000385262 94 ntBASIC0.4□□□□□ -2.35
TRBV4-1A0A0J9YWV2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNU6-135P-201ENST00000516769 101 ntBASIC0.4□□□□□ -2.35
TRBV4-1A0A0J9YWV2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.4□□□□□ -2.35
TRBV4-1A0A0J9YWV2 SNORA36.1-201ENST00000363424 132 ntBASIC0.39□□□□□ -2.35
TRBV4-1A0A0J9YWV2 Y_RNA.170-201ENST00000363746 110 ntBASIC0.39□□□□□ -2.35
TRBV4-1A0A0J9YWV2 MIR206-201ENST00000384872 86 ntBASIC0.39□□□□□ -2.35
TRBV4-1A0A0J9YWV2 MIR518A1-201ENST00000385068 85 ntBASIC0.39□□□□□ -2.35
TRBV4-1A0A0J9YWV2 SNORD77B-201ENST00000391112 67 ntBASIC0.39□□□□□ -2.35
TRBV4-1A0A0J9YWV2 SNORA40.8-201ENST00000411034 126 ntBASIC0.39□□□□□ -2.35
TRBV4-1A0A0J9YWV2 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNU7-200P-201ENST00000516105 62 ntBASIC0.39□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNU6-469P-201ENST00000516253 101 ntBASIC0.39□□□□□ -2.35
TRBV4-1A0A0J9YWV2 DEFB131E-201ENST00000532329 154 ntBASIC0.39□□□□□ -2.35
TRBV4-1A0A0J9YWV2 U7.2-201ENST00000607576 63 ntBASIC0.39□□□□□ -2.35
TRBV4-1A0A0J9YWV2 AC105081.1-201ENST00000617727 106 ntBASIC0.39□□□□□ -2.35
TRBV4-1A0A0J9YWV2 Y_RNA.119-201ENST00000363301 96 ntBASIC0.38□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNU6-647P-201ENST00000364243 107 ntBASIC0.38□□□□□ -2.35
TRBV4-1A0A0J9YWV2 SNORA8.2-201ENST00000384372 139 ntBASIC0.38□□□□□ -2.35
TRBV4-1A0A0J9YWV2 Y_RNA.567-201ENST00000384736 106 ntBASIC0.38□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RNU6-1321P-201ENST00000390905 107 ntBASIC0.38□□□□□ -2.35
TRBV4-1A0A0J9YWV2 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
TRBV4-1A0A0J9YWV2 AC098934.3-201ENST00000430450 190 ntBASIC0.38□□□□□ -2.35
TRBV4-1A0A0J9YWV2 RPS29P1-201ENST00000465274 159 ntBASIC0.38□□□□□ -2.35
TRBV4-1A0A0J9YWV2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.38□□□□□ -2.35
TRBV4-1A0A0J9YWV2 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
TRBV4-1A0A0J9YWV2 SNORD118-201ENST00000363593 134 ntBASIC0.37□□□□□ -2.35
TRBV4-1A0A0J9YWV2 SNORD114-22-201ENST00000365423 72 ntBASIC0.37□□□□□ -2.35
TRBV4-1A0A0J9YWV2 Y_RNA.488-201ENST00000384403 102 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 280.3 ms