Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.93□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR548AE2-201ENST00000583456 67 ntBASIC-0.93□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR3688-2-201ENST00000636963 87 ntBASIC-0.93□□□□□ -2.56
TRAV1-1A0A0B4J248 SNORD114-10-201ENST00000363409 72 ntBASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 RNA5SP331-201ENST00000364986 107 ntBASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR519A1-201ENST00000385257 85 ntBASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR652-201ENST00000385278 98 ntBASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 RNA5SP144-201ENST00000410846 116 ntBASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU6-130P-201ENST00000411112 103 ntBASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU7-113P-201ENST00000459273 62 ntBASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU7-106P-201ENST00000459514 67 ntBASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU6-358P-201ENST00000516564 75 ntBASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU7-30P-201ENST00000516835 62 ntBASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 SCARNA15-202ENST00000516881 127 ntBASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU6-699P-201ENST00000517081 110 ntBASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 AL008718.3-201ENST00000610217 321 ntBASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.94□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR20A-201ENST00000362279 71 ntBASIC-0.95□□□□□ -2.56
TRAV1-1A0A0B4J248 SNORD115-2-201ENST00000362842 82 ntBASIC-0.95□□□□□ -2.56
TRAV1-1A0A0B4J248 SNORD115-20-201ENST00000365099 82 ntBASIC-0.95□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.95□□□□□ -2.56
TRAV1-1A0A0B4J248 SNORD116-1-201ENST00000384335 95 ntBASIC-0.95□□□□□ -2.56
TRAV1-1A0A0B4J248 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.95□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.95□□□□□ -2.56
TRAV1-1A0A0B4J248 AC016907.1-201ENST00000419483 435 ntBASIC-0.95□□□□□ -2.56
TRAV1-1A0A0B4J248 AC082651.2-201ENST00000496833 166 ntBASIC-0.95□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.95□□□□□ -2.56
TRAV1-1A0A0B4J248 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.95□□□□□ -2.56
TRAV1-1A0A0B4J248 PART1_1.1-201ENST00000611761 217 ntBASIC-0.95□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR8068-201ENST00000618032 68 ntBASIC-0.95□□□□□ -2.56
TRAV1-1A0A0B4J248 SNORD115-25-201ENST00000362619 82 ntBASIC-0.96□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.96□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.96□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU6-571P-201ENST00000384128 107 ntBASIC-0.96□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU6-662P-201ENST00000384253 104 ntBASIC-0.96□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.96□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR518B-201ENST00000385127 83 ntBASIC-0.96□□□□□ -2.56
TRAV1-1A0A0B4J248 MT-TY-201ENST00000387409 66 ntBASIC-0.96□□□□□ -2.56
TRAV1-1A0A0B4J248 HSPE1P25-201ENST00000455484 251 ntBASIC-0.96□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR2113-201ENST00000459007 91 ntBASIC-0.96□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU7-70P-201ENST00000516941 66 ntBASIC-0.96□□□□□ -2.56
TRAV1-1A0A0B4J248 RPS29P30-201ENST00000600975 111 ntBASIC-0.96□□□□□ -2.56
TRAV1-1A0A0B4J248 AC006006.1-201ENST00000603082 144 ntBASIC-0.96□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.97□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.97□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.97□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.97□□□□□ -2.56
TRAV1-1A0A0B4J248 AP000533.3-201ENST00000447704 118 ntBASIC-0.97□□□□□ -2.56
TRAV1-1A0A0B4J248 AC022137.1-201ENST00000483735 151 ntBASIC-0.97□□□□□ -2.56
TRAV1-1A0A0B4J248 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-0.97□□□□□ -2.56
TRAV1-1A0A0B4J248 AC097510.1-201ENST00000510945 133 ntBASIC-0.97□□□□□ -2.56
TRAV1-1A0A0B4J248 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.97□□□□□ -2.56
TRAV1-1A0A0B4J248 SNORA40.14-201ENST00000516543 86 ntBASIC-0.97□□□□□ -2.56
TRAV1-1A0A0B4J248 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.97□□□□□ -2.56
TRAV1-1A0A0B4J248 MIR4499-201ENST00000584834 69 ntBASIC-0.97□□□□□ -2.56
TRAV1-1A0A0B4J248 AL365205.2-201ENST00000594586 68 ntBASIC-0.97□□□□□ -2.56
TRAV1-1A0A0B4J248 uc_338.19-201ENST00000616808 99 ntBASIC-0.97□□□□□ -2.56
TRAV1-1A0A0B4J248 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.97□□□□□ -2.56
TRAV1-1A0A0B4J248 SNORD113-8-201ENST00000363497 74 ntBASIC-0.98□□□□□ -2.57
TRAV1-1A0A0B4J248 SNORD115-35-201ENST00000365122 82 ntBASIC-0.98□□□□□ -2.57
TRAV1-1A0A0B4J248 AC244090.1-201ENST00000441884 93 ntBASIC-0.98□□□□□ -2.57
TRAV1-1A0A0B4J248 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.98□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.98□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU6-561P-201ENST00000516222 102 ntBASIC-0.98□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.98□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU6-453P-201ENST00000516819 85 ntBASIC-0.98□□□□□ -2.57
TRAV1-1A0A0B4J248 AC093783.1-201ENST00000612976 329 ntBASIC-0.98□□□□□ -2.57
TRAV1-1A0A0B4J248 U4.5-201ENST00000617137 123 ntBASIC-0.98□□□□□ -2.57
TRAV1-1A0A0B4J248 MIR4320-201ENST00000636981 65 ntBASIC-0.98□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU6-502P-201ENST00000362419 108 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU6-170P-201ENST00000362832 104 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.194-201ENST00000363985 102 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 MIR548I2-201ENST00000408348 149 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 SNX3P1X-201ENST00000414887 175 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 SNORA13-201ENST00000458790 133 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU7-48P-201ENST00000458875 63 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU6-287P-201ENST00000516230 98 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 SNORA27.4-201ENST00000516650 95 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 AC007012.1-201ENST00000567192 175 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 AC002553.4-201ENST00000616896 331 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 snoU18.1-201ENST00000629629 71 ntBASIC-0.99□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.80-201ENST00000362996 102 ntBASIC-1□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.189-201ENST00000363959 112 ntBASIC-1□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.217-201ENST00000364214 105 ntBASIC-1□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.785-201ENST00000384290 109 ntBASIC-1□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.485-201ENST00000384395 102 ntBASIC-1□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU6-905P-201ENST00000384434 107 ntBASIC-1□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.496-201ENST00000384444 101 ntBASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms