Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AC138749.4-201ENST00000563970 127 ntBASIC2.36□□□□□ -2.03
GPC6Q9Y625 MIR4319-201ENST00000577285 85 ntBASIC2.36□□□□□ -2.03
GPC6Q9Y625 MIR4672-201ENST00000583126 81 ntBASIC2.36□□□□□ -2.03
GPC6Q9Y625 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
GPC6Q9Y625 MIR4662A-201ENST00000637499 67 ntBASIC2.36□□□□□ -2.03
GPC6Q9Y625 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
GPC6Q9Y625 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
GPC6Q9Y625 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.36□□□□□ -2.03
GPC6Q9Y625 HSBP1P2-201ENST00000299671 229 ntBASIC2.35□□□□□ -2.03
GPC6Q9Y625 RNA5SP133-201ENST00000363368 119 ntBASIC2.35□□□□□ -2.03
GPC6Q9Y625 RNU6-396P-201ENST00000365369 105 ntBASIC2.35□□□□□ -2.03
GPC6Q9Y625 RNU4-83P-201ENST00000410863 133 ntBASIC2.35□□□□□ -2.03
GPC6Q9Y625 AC079804.2-201ENST00000490376 200 ntBASIC2.35□□□□□ -2.03
GPC6Q9Y625 AC019288.1-201ENST00000557918 224 ntBASIC2.35□□□□□ -2.03
GPC6Q9Y625 MIR6840-201ENST00000611937 71 ntBASIC2.35□□□□□ -2.03
GPC6Q9Y625 MIR6740-201ENST00000618268 113 ntBASIC2.35□□□□□ -2.03
GPC6Q9Y625 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
GPC6Q9Y625 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
GPC6Q9Y625 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
GPC6Q9Y625 RNA5SP456-201ENST00000364002 114 ntBASIC2.34□□□□□ -2.03
GPC6Q9Y625 MIR196B-201ENST00000384852 84 ntBASIC2.34□□□□□ -2.03
GPC6Q9Y625 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
GPC6Q9Y625 SNORD23.1-201ENST00000408212 104 ntBASIC2.34□□□□□ -2.03
GPC6Q9Y625 RNU7-153P-201ENST00000516455 62 ntBASIC2.34□□□□□ -2.03
GPC6Q9Y625 SNORA4-201ENST00000584302 138 ntBASIC2.34□□□□□ -2.03
GPC6Q9Y625 AL357312.1-201ENST00000603879 298 ntBASIC2.34□□□□□ -2.03
GPC6Q9Y625 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
GPC6Q9Y625 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.33□□□□□ -2.04
GPC6Q9Y625 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
GPC6Q9Y625 RNU6-776P-201ENST00000364403 104 ntBASIC2.33□□□□□ -2.04
GPC6Q9Y625 RNU6-1022P-201ENST00000365049 104 ntBASIC2.33□□□□□ -2.04
GPC6Q9Y625 HSPE1P24-201ENST00000450782 238 ntBASIC2.33□□□□□ -2.04
GPC6Q9Y625 RNU7-62P-201ENST00000458856 62 ntBASIC2.33□□□□□ -2.04
GPC6Q9Y625 RNU6-850P-201ENST00000516934 103 ntBASIC2.33□□□□□ -2.04
GPC6Q9Y625 AP000942.3-201ENST00000603702 160 ntBASIC2.33□□□□□ -2.04
GPC6Q9Y625 MIR8063-201ENST00000621930 81 ntBASIC2.33□□□□□ -2.04
GPC6Q9Y625 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.32□□□□□ -2.04
GPC6Q9Y625 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
GPC6Q9Y625 Y_RNA.119-201ENST00000363301 96 ntBASIC2.32□□□□□ -2.04
GPC6Q9Y625 RNU6-301P-201ENST00000384277 107 ntBASIC2.32□□□□□ -2.04
GPC6Q9Y625 RNU6-1165P-201ENST00000410119 107 ntBASIC2.32□□□□□ -2.04
GPC6Q9Y625 AL161935.2-201ENST00000414627 60 ntBASIC2.32□□□□□ -2.04
GPC6Q9Y625 MIR4287-201ENST00000579398 78 ntBASIC2.32□□□□□ -2.04
GPC6Q9Y625 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.32□□□□□ -2.04
GPC6Q9Y625 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
GPC6Q9Y625 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
GPC6Q9Y625 MIR27B-201ENST00000385129 97 ntBASIC2.31□□□□□ -2.04
GPC6Q9Y625 AC087499.7-201ENST00000441958 109 ntBASIC2.31□□□□□ -2.04
GPC6Q9Y625 MIR4712-201ENST00000583750 82 ntBASIC2.31□□□□□ -2.04
GPC6Q9Y625 Y_RNA.94-201ENST00000363068 106 ntBASIC2.3□□□□□ -2.04
GPC6Q9Y625 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
GPC6Q9Y625 MIR1302-7-201ENST00000408841 72 ntBASIC2.3□□□□□ -2.04
GPC6Q9Y625 SNRPGP12-201ENST00000449481 213 ntBASIC2.3□□□□□ -2.04
GPC6Q9Y625 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.3□□□□□ -2.04
GPC6Q9Y625 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
GPC6Q9Y625 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
GPC6Q9Y625 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
GPC6Q9Y625 AL596028.1-201ENST00000326971 197 ntBASIC2.29□□□□□ -2.04
GPC6Q9Y625 RNU4-52P-201ENST00000384209 138 ntBASIC2.29□□□□□ -2.04
GPC6Q9Y625 RNA5SP212-201ENST00000391223 107 ntBASIC2.29□□□□□ -2.04
GPC6Q9Y625 MIR1236-201ENST00000408340 102 ntBASIC2.29□□□□□ -2.04
GPC6Q9Y625 RNA5SP95-201ENST00000410319 137 ntBASIC2.29□□□□□ -2.04
GPC6Q9Y625 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.29□□□□□ -2.04
GPC6Q9Y625 AC108938.1-201ENST00000451204 136 ntBASIC2.29□□□□□ -2.04
GPC6Q9Y625 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
GPC6Q9Y625 MIR2115-201ENST00000516657 100 ntBASIC2.29□□□□□ -2.04
GPC6Q9Y625 MIR4264-201ENST00000583520 66 ntBASIC2.29□□□□□ -2.04
GPC6Q9Y625 GHRLOS.1-201ENST00000610995 70 ntBASIC2.29□□□□□ -2.04
GPC6Q9Y625 U4.3-201ENST00000621047 82 ntBASIC2.29□□□□□ -2.04
GPC6Q9Y625 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
GPC6Q9Y625 MIR449A-201ENST00000362113 91 ntBASIC2.28□□□□□ -2.04
GPC6Q9Y625 SNORA72.6-201ENST00000384520 129 ntBASIC2.28□□□□□ -2.04
GPC6Q9Y625 HMGN2P38-201ENST00000423806 265 ntBASIC2.28□□□□□ -2.04
GPC6Q9Y625 RN7SL429P-201ENST00000479090 223 ntBASIC2.28□□□□□ -2.04
GPC6Q9Y625 RN7SL489P-201ENST00000486185 223 ntBASIC2.28□□□□□ -2.04
GPC6Q9Y625 RN7SL327P-201ENST00000488659 223 ntBASIC2.28□□□□□ -2.04
GPC6Q9Y625 SNORD53-201ENST00000579969 78 ntBASIC2.28□□□□□ -2.04
GPC6Q9Y625 MIR3162-201ENST00000581818 82 ntBASIC2.28□□□□□ -2.04
GPC6Q9Y625 uc_338.6-201ENST00000613544 171 ntBASIC2.28□□□□□ -2.04
GPC6Q9Y625 RN7SL853P-201ENST00000617250 223 ntBASIC2.28□□□□□ -2.04
GPC6Q9Y625 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
GPC6Q9Y625 MIR30D-201ENST00000362283 70 ntBASIC2.27□□□□□ -2.05
GPC6Q9Y625 RNA5SP68-201ENST00000363885 119 ntBASIC2.27□□□□□ -2.05
GPC6Q9Y625 SNORA16B-201ENST00000364674 135 ntBASIC2.27□□□□□ -2.05
GPC6Q9Y625 RNA5SP126-201ENST00000365092 109 ntBASIC2.27□□□□□ -2.05
GPC6Q9Y625 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
GPC6Q9Y625 SNORD4B-201ENST00000459083 72 ntBASIC2.27□□□□□ -2.05
GPC6Q9Y625 RNA5SP320-201ENST00000516263 124 ntBASIC2.27□□□□□ -2.05
GPC6Q9Y625 AC140658.3-201ENST00000567603 271 ntBASIC2.27□□□□□ -2.05
GPC6Q9Y625 MIR6817-201ENST00000615588 66 ntBASIC2.27□□□□□ -2.05
GPC6Q9Y625 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
GPC6Q9Y625 MIR103A2-201ENST00000362154 78 ntBASIC2.26□□□□□ -2.05
GPC6Q9Y625 MIR563-201ENST00000385080 79 ntBASIC2.26□□□□□ -2.05
GPC6Q9Y625 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
GPC6Q9Y625 AC245517.4-201ENST00000448601 281 ntBASIC2.26□□□□□ -2.05
GPC6Q9Y625 RN7SL274P-201ENST00000492268 272 ntBASIC2.26□□□□□ -2.05
GPC6Q9Y625 AC019176.1-201ENST00000518519 225 ntBASIC2.26□□□□□ -2.05
GPC6Q9Y625 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.26□□□□□ -2.05
GPC6Q9Y625 MIR21-201ENST00000362134 72 ntBASIC2.25□□□□□ -2.05
GPC6Q9Y625 MIRLET7G-201ENST00000362280 84 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms