Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 RNA5SP285-201ENST00000516619 119 ntBASIC0.23□□□□□ -2.37
USP16Q9Y5T5 AC141846.1-201ENST00000568348 142 ntBASIC0.23□□□□□ -2.37
USP16Q9Y5T5 MIR8066-201ENST00000617280 78 ntBASIC0.23□□□□□ -2.37
USP16Q9Y5T5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
USP16Q9Y5T5 MIR103A1-201ENST00000362165 78 ntBASIC0.22□□□□□ -2.37
USP16Q9Y5T5 RNU6-403P-201ENST00000363163 104 ntBASIC0.22□□□□□ -2.37
USP16Q9Y5T5 Y_RNA.174-201ENST00000363781 105 ntBASIC0.22□□□□□ -2.37
USP16Q9Y5T5 SNORA25.7-201ENST00000364375 127 ntBASIC0.22□□□□□ -2.37
USP16Q9Y5T5 MIR1302-3-201ENST00000408128 138 ntBASIC0.22□□□□□ -2.37
USP16Q9Y5T5 AL512326.2-201ENST00000426359 151 ntBASIC0.22□□□□□ -2.37
USP16Q9Y5T5 MIR3678-201ENST00000578455 94 ntBASIC0.22□□□□□ -2.37
USP16Q9Y5T5 Y_RNA.396-201ENST00000383949 103 ntBASIC0.21□□□□□ -2.38
USP16Q9Y5T5 Y_RNA.476-201ENST00000384347 108 ntBASIC0.21□□□□□ -2.38
USP16Q9Y5T5 SNORA8.2-201ENST00000384372 139 ntBASIC0.21□□□□□ -2.38
USP16Q9Y5T5 AC133485.4-201ENST00000561835 220 ntBASIC0.21□□□□□ -2.38
USP16Q9Y5T5 AC008737.2-201ENST00000599446 118 ntBASIC0.21□□□□□ -2.38
USP16Q9Y5T5 MIR6082-201ENST00000613604 109 ntBASIC0.21□□□□□ -2.38
USP16Q9Y5T5 Y_RNA.47-201ENST00000362697 108 ntBASIC0.2□□□□□ -2.38
USP16Q9Y5T5 SNORD118-201ENST00000363593 134 ntBASIC0.2□□□□□ -2.38
USP16Q9Y5T5 RNU6-978P-201ENST00000364371 103 ntBASIC0.2□□□□□ -2.38
USP16Q9Y5T5 RNU6-643P-201ENST00000384018 107 ntBASIC0.2□□□□□ -2.38
USP16Q9Y5T5 RNU6-949P-201ENST00000384040 107 ntBASIC0.2□□□□□ -2.38
USP16Q9Y5T5 Y_RNA.478-201ENST00000384358 107 ntBASIC0.2□□□□□ -2.38
USP16Q9Y5T5 RNU4-70P-201ENST00000384579 139 ntBASIC0.2□□□□□ -2.38
USP16Q9Y5T5 RNA5SP299-201ENST00000391203 116 ntBASIC0.2□□□□□ -2.38
USP16Q9Y5T5 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.2□□□□□ -2.38
USP16Q9Y5T5 SNORD127-201ENST00000458892 86 ntBASIC0.2□□□□□ -2.38
USP16Q9Y5T5 AC011921.3-201ENST00000605540 361 ntBASIC0.2□□□□□ -2.38
USP16Q9Y5T5 AC067863.3-201ENST00000624172 122 ntBASIC0.2□□□□□ -2.38
USP16Q9Y5T5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.19□□□□□ -2.38
USP16Q9Y5T5 RNU6-349P-201ENST00000362402 107 ntBASIC0.19□□□□□ -2.38
USP16Q9Y5T5 Y_RNA.76-201ENST00000362931 109 ntBASIC0.19□□□□□ -2.38
USP16Q9Y5T5 RNU6-1229P-201ENST00000364295 107 ntBASIC0.19□□□□□ -2.38
USP16Q9Y5T5 Y_RNA.308-201ENST00000365043 101 ntBASIC0.19□□□□□ -2.38
USP16Q9Y5T5 Y_RNA.459-201ENST00000384251 102 ntBASIC0.19□□□□□ -2.38
USP16Q9Y5T5 SNORA72.6-201ENST00000384520 129 ntBASIC0.19□□□□□ -2.38
USP16Q9Y5T5 RNU6-1011P-201ENST00000384668 107 ntBASIC0.19□□□□□ -2.38
USP16Q9Y5T5 Y_RNA.562-201ENST00000384695 113 ntBASIC0.19□□□□□ -2.38
USP16Q9Y5T5 RNU2-38P-201ENST00000410856 79 ntBASIC0.19□□□□□ -2.38
USP16Q9Y5T5 SNRPGP12-201ENST00000449481 213 ntBASIC0.19□□□□□ -2.38
USP16Q9Y5T5 AC108740.1-201ENST00000498629 225 ntBASIC0.19□□□□□ -2.38
USP16Q9Y5T5 RNU6-1149P-201ENST00000516810 97 ntBASIC0.19□□□□□ -2.38
USP16Q9Y5T5 RNU2-4P-201ENST00000606190 192 ntBASIC0.19□□□□□ -2.38
USP16Q9Y5T5 SNORA25.18-201ENST00000607153 114 ntBASIC0.19□□□□□ -2.38
USP16Q9Y5T5 Y_RNA.13-201ENST00000362403 112 ntBASIC0.18□□□□□ -2.38
USP16Q9Y5T5 RNY4P28-201ENST00000365281 93 ntBASIC0.18□□□□□ -2.38
USP16Q9Y5T5 RNY1P6-201ENST00000384193 109 ntBASIC0.18□□□□□ -2.38
USP16Q9Y5T5 SNORA18-201ENST00000384416 132 ntBASIC0.18□□□□□ -2.38
USP16Q9Y5T5 RNU6-35P-201ENST00000384530 107 ntBASIC0.18□□□□□ -2.38
USP16Q9Y5T5 U8.15-201ENST00000390947 134 ntBASIC0.18□□□□□ -2.38
USP16Q9Y5T5 RNU6-1086P-201ENST00000410930 100 ntBASIC0.18□□□□□ -2.38
USP16Q9Y5T5 MIR4643-201ENST00000577473 78 ntBASIC0.18□□□□□ -2.38
USP16Q9Y5T5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.18□□□□□ -2.38
USP16Q9Y5T5 SNORD44.1-201ENST00000363202 61 ntBASIC0.17□□□□□ -2.38
USP16Q9Y5T5 Y_RNA.182-201ENST00000363880 111 ntBASIC0.17□□□□□ -2.38
USP16Q9Y5T5 RNU6-738P-201ENST00000384531 106 ntBASIC0.17□□□□□ -2.38
USP16Q9Y5T5 Y_RNA.571-201ENST00000384753 98 ntBASIC0.17□□□□□ -2.38
USP16Q9Y5T5 RNU6-493P-201ENST00000391321 108 ntBASIC0.17□□□□□ -2.38
USP16Q9Y5T5 RNU6-1194P-201ENST00000516208 104 ntBASIC0.17□□□□□ -2.38
USP16Q9Y5T5 SCARNA15-202ENST00000516881 127 ntBASIC0.17□□□□□ -2.38
USP16Q9Y5T5 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
USP16Q9Y5T5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.16□□□□□ -2.38
USP16Q9Y5T5 SNORD27-201ENST00000363981 72 ntBASIC0.16□□□□□ -2.38
USP16Q9Y5T5 RNU6-275P-201ENST00000364910 107 ntBASIC0.16□□□□□ -2.38
USP16Q9Y5T5 RNU6-597P-201ENST00000365620 102 ntBASIC0.16□□□□□ -2.38
USP16Q9Y5T5 MIR329-2-201ENST00000385029 84 ntBASIC0.16□□□□□ -2.38
USP16Q9Y5T5 Y_RNA.588-201ENST00000391254 102 ntBASIC0.16□□□□□ -2.38
USP16Q9Y5T5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.16□□□□□ -2.38
USP16Q9Y5T5 MIR4491-201ENST00000581087 68 ntBASIC0.16□□□□□ -2.38
USP16Q9Y5T5 MIR4305-201ENST00000583252 102 ntBASIC0.16□□□□□ -2.38
USP16Q9Y5T5 RNU4-16P-201ENST00000364737 141 ntBASIC0.15□□□□□ -2.39
USP16Q9Y5T5 Y_RNA.521-201ENST00000384560 114 ntBASIC0.15□□□□□ -2.39
USP16Q9Y5T5 RNU2-59P-201ENST00000410482 191 ntBASIC0.15□□□□□ -2.39
USP16Q9Y5T5 Y_RNA.617-201ENST00000410920 90 ntBASIC0.15□□□□□ -2.39
USP16Q9Y5T5 AL022718.1-201ENST00000412004 84 ntBASIC0.15□□□□□ -2.39
USP16Q9Y5T5 AC073261.1-201ENST00000429409 121 ntBASIC0.15□□□□□ -2.39
USP16Q9Y5T5 RNU4-71P-201ENST00000516258 113 ntBASIC0.15□□□□□ -2.39
USP16Q9Y5T5 Y_RNA.697-201ENST00000516776 113 ntBASIC0.15□□□□□ -2.39
USP16Q9Y5T5 RNA5SP268-201ENST00000516828 124 ntBASIC0.15□□□□□ -2.39
USP16Q9Y5T5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
USP16Q9Y5T5 MIR4315-1-201ENST00000636800 73 ntBASIC0.15□□□□□ -2.39
USP16Q9Y5T5 MIR4315-2-201ENST00000640925 73 ntBASIC0.15□□□□□ -2.39
USP16Q9Y5T5 Y_RNA.20-201ENST00000362479 113 ntBASIC0.14□□□□□ -2.39
USP16Q9Y5T5 Y_RNA.536-201ENST00000384621 113 ntBASIC0.14□□□□□ -2.39
USP16Q9Y5T5 SNORD58.1-201ENST00000391313 66 ntBASIC0.14□□□□□ -2.39
USP16Q9Y5T5 Y_RNA.626-201ENST00000411288 95 ntBASIC0.14□□□□□ -2.39
USP16Q9Y5T5 MTCYBP9-201ENST00000431021 303 ntBASIC0.14□□□□□ -2.39
USP16Q9Y5T5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.14□□□□□ -2.39
USP16Q9Y5T5 SCARNA16.5-201ENST00000517114 183 ntBASIC0.14□□□□□ -2.39
USP16Q9Y5T5 AC112693.2-201ENST00000556538 232 ntBASIC0.14□□□□□ -2.39
USP16Q9Y5T5 MIR4431-201ENST00000579990 94 ntBASIC0.14□□□□□ -2.39
USP16Q9Y5T5 MIR5190-201ENST00000581537 80 ntBASIC0.14□□□□□ -2.39
USP16Q9Y5T5 Y_RNA.32-201ENST00000362589 110 ntBASIC0.13□□□□□ -2.39
USP16Q9Y5T5 RNU4-58P-201ENST00000363192 141 ntBASIC0.13□□□□□ -2.39
USP16Q9Y5T5 Y_RNA.350-201ENST00000365409 98 ntBASIC0.13□□□□□ -2.39
USP16Q9Y5T5 RNU6-535P-201ENST00000384722 107 ntBASIC0.13□□□□□ -2.39
USP16Q9Y5T5 RNU7-113P-201ENST00000459273 62 ntBASIC0.13□□□□□ -2.39
USP16Q9Y5T5 Y_RNA.757-201ENST00000578934 114 ntBASIC0.13□□□□□ -2.39
USP16Q9Y5T5 MIR4639-201ENST00000584938 69 ntBASIC0.13□□□□□ -2.39
USP16Q9Y5T5 MIR4768-201ENST00000585270 74 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms