Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 RNA5SP330-201ENST00000517096 96 ntBASIC1.16□□□□□ -2.22
RAI2Q9Y5P3 MIR4264-201ENST00000583520 66 ntBASIC1.16□□□□□ -2.22
RAI2Q9Y5P3 SEPT14P17-201ENST00000617978 177 ntBASIC1.16□□□□□ -2.22
RAI2Q9Y5P3 AL589743.1-201ENST00000551932 2712 ntBASIC1.15□□□□□ -2.23
RAI2Q9Y5P3 Y_RNA.71-201ENST00000362892 104 ntBASIC1.15□□□□□ -2.23
RAI2Q9Y5P3 Y_RNA.298-201ENST00000364960 107 ntBASIC1.15□□□□□ -2.23
RAI2Q9Y5P3 SNORD26-201ENST00000384147 75 ntBASIC1.15□□□□□ -2.23
RAI2Q9Y5P3 MIR1302-7-201ENST00000408841 72 ntBASIC1.15□□□□□ -2.23
RAI2Q9Y5P3 RNA5SP237-201ENST00000410414 113 ntBASIC1.15□□□□□ -2.23
RAI2Q9Y5P3 AC090844.1-201ENST00000422019 156 ntBASIC1.15□□□□□ -2.23
RAI2Q9Y5P3 AC008267.6-201ENST00000441664 139 ntBASIC1.15□□□□□ -2.23
RAI2Q9Y5P3 RNY4P20-201ENST00000516678 93 ntBASIC1.15□□□□□ -2.23
RAI2Q9Y5P3 RNU6-1234P-201ENST00000516877 103 ntBASIC1.15□□□□□ -2.23
RAI2Q9Y5P3 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
RAI2Q9Y5P3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.15□□□□□ -2.23
RAI2Q9Y5P3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
RAI2Q9Y5P3 Y_RNA.218-201ENST00000364218 104 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 Y_RNA.280-201ENST00000364765 112 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 SNORD116-14-201ENST00000383894 92 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 SNORD116-17-201ENST00000383929 92 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 SNORD116-15-201ENST00000384445 92 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 RNU6-35P-201ENST00000384530 107 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 SNORD116-19-201ENST00000384729 92 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 MT-TN-201ENST00000387400 73 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 RNU6-205P-201ENST00000390858 107 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 RNU6-613P-201ENST00000410412 108 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 RNA5SP136-201ENST00000410906 107 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 RNU7-123P-201ENST00000515911 60 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 RNU6-772P-201ENST00000516042 105 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 AP003716.2-201ENST00000528260 108 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 MIR6516-201ENST00000630554 81 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 MIR6841-201ENST00000637129 72 ntBASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
RAI2Q9Y5P3 Y_RNA.213-201ENST00000364178 111 ntBASIC1.13□□□□□ -2.23
RAI2Q9Y5P3 SNORA2B-201ENST00000384583 137 ntBASIC1.13□□□□□ -2.23
RAI2Q9Y5P3 MIR150-201ENST00000385048 84 ntBASIC1.13□□□□□ -2.23
RAI2Q9Y5P3 AL606753.1-201ENST00000427435 87 ntBASIC1.13□□□□□ -2.23
RAI2Q9Y5P3 AC113410.1-201ENST00000505029 247 ntBASIC1.13□□□□□ -2.23
RAI2Q9Y5P3 RNU2-35P-201ENST00000516446 142 ntBASIC1.13□□□□□ -2.23
RAI2Q9Y5P3 RNU6-406P-201ENST00000516470 107 ntBASIC1.13□□□□□ -2.23
RAI2Q9Y5P3 RNA5SP33-201ENST00000516687 98 ntBASIC1.13□□□□□ -2.23
RAI2Q9Y5P3 AC096720.1-201ENST00000604441 183 ntBASIC1.13□□□□□ -2.23
RAI2Q9Y5P3 AC211469.2-201ENST00000605461 205 ntBASIC1.13□□□□□ -2.23
RAI2Q9Y5P3 AL157777.2-201ENST00000258070 137 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 MIR26B-201ENST00000362251 77 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 Y_RNA.171-201ENST00000363760 102 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 RNU6-654P-201ENST00000364373 107 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 Y_RNA.299-201ENST00000364973 94 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 SNORD58C-201ENST00000365223 64 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 Y_RNA.346-201ENST00000365385 112 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 Y_RNA.531-201ENST00000384589 121 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 SNORA19-201ENST00000384737 128 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 SNORA75.2-201ENST00000391138 150 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 SNORA75.3-201ENST00000391231 150 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 Y_RNA.617-201ENST00000410920 90 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 RPL39P25-201ENST00000449384 154 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 RNU7-62P-201ENST00000458856 62 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 RNU7-107P-201ENST00000459121 61 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 RNU7-90P-201ENST00000459216 62 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 RNU6-1333P-201ENST00000516162 93 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 AC004812.1-201ENST00000540773 146 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 AC025166.1-201ENST00000612411 163 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 U2.22-201ENST00000636441 106 ntBASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
RAI2Q9Y5P3 MIR377-201ENST00000362145 69 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 RNA5SP327-201ENST00000362494 101 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 Y_RNA.127-201ENST00000363386 109 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 SNORA25.8-201ENST00000364831 128 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 SNORA25-201ENST00000384384 134 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 Y_RNA.528-201ENST00000384575 108 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 RNU6-1237P-201ENST00000384777 107 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 MIR588-201ENST00000384900 83 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 SNORD12C-201ENST00000386307 89 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 RNA5SP95-201ENST00000410319 137 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 AL512326.2-201ENST00000426359 151 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 SNORD79.1-201ENST00000516069 84 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 RNU6-781P-201ENST00000516377 101 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 IGKV1-22-201ENST00000524313 326 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 AC019288.1-201ENST00000557918 224 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 CYP3A137P-201ENST00000562436 69 ntBASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
RAI2Q9Y5P3 AC008163.1-202ENST00000636004 2889 ntBASIC1.1□□□□□ -2.23
RAI2Q9Y5P3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
RAI2Q9Y5P3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.1□□□□□ -2.23
RAI2Q9Y5P3 SNORA18-201ENST00000384416 132 ntBASIC1.1□□□□□ -2.23
RAI2Q9Y5P3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
RAI2Q9Y5P3 SNORD12-201ENST00000391002 90 ntBASIC1.1□□□□□ -2.23
RAI2Q9Y5P3 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
RAI2Q9Y5P3 AC244023.1-201ENST00000426884 112 ntBASIC1.1□□□□□ -2.23
RAI2Q9Y5P3 AC098934.3-201ENST00000430450 190 ntBASIC1.1□□□□□ -2.23
RAI2Q9Y5P3 RNU7-21P-201ENST00000459430 62 ntBASIC1.1□□□□□ -2.23
RAI2Q9Y5P3 COX6CP6-201ENST00000490840 228 ntBASIC1.1□□□□□ -2.23
RAI2Q9Y5P3 AC023827.1-201ENST00000569247 97 ntBASIC1.1□□□□□ -2.23
RAI2Q9Y5P3 AC242498.1-201ENST00000604134 111 ntBASIC1.1□□□□□ -2.23
RAI2Q9Y5P3 MIR373-201ENST00000362273 69 ntBASIC1.09□□□□□ -2.23
RAI2Q9Y5P3 Y_RNA.258-201ENST00000364613 105 ntBASIC1.09□□□□□ -2.23
RAI2Q9Y5P3 SNORD113.3-201ENST00000364630 78 ntBASIC1.09□□□□□ -2.23
RAI2Q9Y5P3 RNU6-22P-201ENST00000384355 107 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms