Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 RNU6-1014P-201ENST00000383940 103 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 RNU6-447P-201ENST00000410293 104 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 RNA5SP95-201ENST00000410319 137 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 RNU6-1118P-201ENST00000410382 104 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 RNU6-1076P-201ENST00000410397 104 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 RNU6-355P-201ENST00000410427 104 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 RNU6-791P-201ENST00000410467 104 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 RNU6-705P-201ENST00000410601 104 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 RNU6-1100P-201ENST00000410691 104 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 RNU6-860P-201ENST00000410860 104 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 RNU6-1217P-201ENST00000411276 104 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 RNU6-785P-201ENST00000411324 104 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 RNU7-90P-201ENST00000459216 62 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 PDCD5P2-201ENST00000507570 312 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 SNORA25.15-201ENST00000516487 89 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 AC036111.3-201ENST00000526389 112 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 SNORA4-201ENST00000584302 138 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 U6.90-201ENST00000614007 104 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 AC012676.2-201ENST00000619258 186 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 U6.70-201ENST00000620287 104 ntBASIC1.54□□□□□ -2.16
PCDHA9Q9Y5H5 SNORA2B-201ENST00000384583 137 ntBASIC1.53□□□□□ -2.16
PCDHA9Q9Y5H5 MIR504-201ENST00000385065 83 ntBASIC1.53□□□□□ -2.16
PCDHA9Q9Y5H5 SNORD111-201ENST00000408139 94 ntBASIC1.53□□□□□ -2.16
PCDHA9Q9Y5H5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.53□□□□□ -2.16
PCDHA9Q9Y5H5 RPL39P25-201ENST00000449384 154 ntBASIC1.53□□□□□ -2.16
PCDHA9Q9Y5H5 SNORD67.1-201ENST00000516618 108 ntBASIC1.53□□□□□ -2.16
PCDHA9Q9Y5H5 RNU7-137P-201ENST00000516788 62 ntBASIC1.53□□□□□ -2.16
PCDHA9Q9Y5H5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.53□□□□□ -2.16
PCDHA9Q9Y5H5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.53□□□□□ -2.16
PCDHA9Q9Y5H5 RNU6-409P-201ENST00000384114 104 ntBASIC1.52□□□□□ -2.17
PCDHA9Q9Y5H5 RNU7-2P-201ENST00000516096 62 ntBASIC1.52□□□□□ -2.17
PCDHA9Q9Y5H5 RNU6-1018P-201ENST00000516577 106 ntBASIC1.52□□□□□ -2.17
PCDHA9Q9Y5H5 AC106800.4-201ENST00000614905 153 ntBASIC1.52□□□□□ -2.17
PCDHA9Q9Y5H5 AL391516.1-201ENST00000554380 2449 ntBASIC1.52□□□□□ -2.17
PCDHA9Q9Y5H5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
PCDHA9Q9Y5H5 Y_RNA.116-201ENST00000363292 103 ntBASIC1.51□□□□□ -2.17
PCDHA9Q9Y5H5 RNU6-106P-201ENST00000384405 107 ntBASIC1.51□□□□□ -2.17
PCDHA9Q9Y5H5 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
PCDHA9Q9Y5H5 MIR206-201ENST00000384872 86 ntBASIC1.51□□□□□ -2.17
PCDHA9Q9Y5H5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.51□□□□□ -2.17
PCDHA9Q9Y5H5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.51□□□□□ -2.17
PCDHA9Q9Y5H5 RNU6-521P-201ENST00000516663 105 ntBASIC1.51□□□□□ -2.17
PCDHA9Q9Y5H5 Y_RNA.155-201ENST00000363632 101 ntBASIC1.5□□□□□ -2.17
PCDHA9Q9Y5H5 MIR320A-201ENST00000385302 82 ntBASIC1.5□□□□□ -2.17
PCDHA9Q9Y5H5 MIR1302-5-201ENST00000408164 150 ntBASIC1.5□□□□□ -2.17
PCDHA9Q9Y5H5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.5□□□□□ -2.17
PCDHA9Q9Y5H5 RNU6-733P-201ENST00000410759 104 ntBASIC1.5□□□□□ -2.17
PCDHA9Q9Y5H5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.5□□□□□ -2.17
PCDHA9Q9Y5H5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.5□□□□□ -2.17
PCDHA9Q9Y5H5 SNORA63.4-201ENST00000362763 126 ntBASIC1.49□□□□□ -2.17
PCDHA9Q9Y5H5 Y_RNA.163-201ENST00000363702 113 ntBASIC1.49□□□□□ -2.17
PCDHA9Q9Y5H5 SNORD26-201ENST00000384147 75 ntBASIC1.49□□□□□ -2.17
PCDHA9Q9Y5H5 SNORA25-201ENST00000384384 134 ntBASIC1.49□□□□□ -2.17
PCDHA9Q9Y5H5 MTATP6P29-201ENST00000415057 132 ntBASIC1.49□□□□□ -2.17
PCDHA9Q9Y5H5 SNORA7.5-201ENST00000410672 110 ntBASIC1.48□□□□□ -2.17
PCDHA9Q9Y5H5 RNU6-970P-201ENST00000516312 107 ntBASIC1.48□□□□□ -2.17
PCDHA9Q9Y5H5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.48□□□□□ -2.17
PCDHA9Q9Y5H5 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.48□□□□□ -2.17
PCDHA9Q9Y5H5 uc_338.6-201ENST00000613544 171 ntBASIC1.48□□□□□ -2.17
PCDHA9Q9Y5H5 AC008163.1-202ENST00000636004 2889 ntBASIC1.47□□□□□ -2.17
PCDHA9Q9Y5H5 RNA5SP327-201ENST00000362494 101 ntBASIC1.47□□□□□ -2.17
PCDHA9Q9Y5H5 Y_RNA.78-201ENST00000362970 110 ntBASIC1.47□□□□□ -2.17
PCDHA9Q9Y5H5 Y_RNA.98-201ENST00000363109 102 ntBASIC1.47□□□□□ -2.17
PCDHA9Q9Y5H5 RNA5SP190-201ENST00000365222 118 ntBASIC1.47□□□□□ -2.17
PCDHA9Q9Y5H5 RNU6-1113P-201ENST00000384348 107 ntBASIC1.47□□□□□ -2.17
PCDHA9Q9Y5H5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
PCDHA9Q9Y5H5 U8.15-201ENST00000390947 134 ntBASIC1.47□□□□□ -2.17
PCDHA9Q9Y5H5 RNU6-548P-201ENST00000517083 115 ntBASIC1.47□□□□□ -2.17
PCDHA9Q9Y5H5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.47□□□□□ -2.17
PCDHA9Q9Y5H5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
PCDHA9Q9Y5H5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
PCDHA9Q9Y5H5 RNU6-934P-201ENST00000365154 107 ntBASIC1.46□□□□□ -2.18
PCDHA9Q9Y5H5 Y_RNA.360-201ENST00000365512 102 ntBASIC1.46□□□□□ -2.18
PCDHA9Q9Y5H5 RNU6-1321P-201ENST00000390905 107 ntBASIC1.46□□□□□ -2.18
PCDHA9Q9Y5H5 RNU6-679P-201ENST00000391003 106 ntBASIC1.46□□□□□ -2.18
PCDHA9Q9Y5H5 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.46□□□□□ -2.18
PCDHA9Q9Y5H5 RNU6-554P-201ENST00000410466 106 ntBASIC1.46□□□□□ -2.18
PCDHA9Q9Y5H5 AL031737.1-201ENST00000450125 223 ntBASIC1.46□□□□□ -2.18
PCDHA9Q9Y5H5 RNU1-98P-201ENST00000458992 160 ntBASIC1.46□□□□□ -2.18
PCDHA9Q9Y5H5 AC133485.1-201ENST00000567176 124 ntBASIC1.46□□□□□ -2.18
PCDHA9Q9Y5H5 AC023827.1-201ENST00000569247 97 ntBASIC1.46□□□□□ -2.18
PCDHA9Q9Y5H5 MIR4694-201ENST00000578534 80 ntBASIC1.46□□□□□ -2.18
PCDHA9Q9Y5H5 BX248123.2-201ENST00000606318 124 ntBASIC1.46□□□□□ -2.18
PCDHA9Q9Y5H5 uc_338.28-201ENST00000612082 187 ntBASIC1.46□□□□□ -2.18
PCDHA9Q9Y5H5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.46□□□□□ -2.18
PCDHA9Q9Y5H5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PCDHA9Q9Y5H5 RNU6-1313P-201ENST00000362622 102 ntBASIC1.45□□□□□ -2.18
PCDHA9Q9Y5H5 Y_RNA.328-201ENST00000365208 113 ntBASIC1.45□□□□□ -2.18
PCDHA9Q9Y5H5 Y_RNA.448-201ENST00000384185 108 ntBASIC1.45□□□□□ -2.18
PCDHA9Q9Y5H5 MIR222-201ENST00000384992 110 ntBASIC1.45□□□□□ -2.18
PCDHA9Q9Y5H5 MIR605-201ENST00000385078 83 ntBASIC1.45□□□□□ -2.18
PCDHA9Q9Y5H5 AL591806.2-201ENST00000433122 173 ntBASIC1.45□□□□□ -2.18
PCDHA9Q9Y5H5 AC002429.1-201ENST00000437672 148 ntBASIC1.45□□□□□ -2.18
PCDHA9Q9Y5H5 SNORD13-201ENST00000459299 104 ntBASIC1.45□□□□□ -2.18
PCDHA9Q9Y5H5 AC105081.1-201ENST00000617727 106 ntBASIC1.45□□□□□ -2.18
PCDHA9Q9Y5H5 AC027335.2-201ENST00000624030 375 ntBASIC1.45□□□□□ -2.18
PCDHA9Q9Y5H5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
PCDHA9Q9Y5H5 RNU6-153P-201ENST00000364422 104 ntBASIC1.44□□□□□ -2.18
PCDHA9Q9Y5H5 RNU6-865P-201ENST00000364772 107 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms