Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 Y_RNA.294-201ENST00000364916 102 ntBASIC1.27□□□□□ -2.21
HDAC9Q9UKV0 Y_RNA.366-201ENST00000365540 102 ntBASIC1.27□□□□□ -2.21
HDAC9Q9UKV0 Y_RNA.433-201ENST00000384089 102 ntBASIC1.27□□□□□ -2.21
HDAC9Q9UKV0 SNORA40-201ENST00000388090 126 ntBASIC1.27□□□□□ -2.21
HDAC9Q9UKV0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
HDAC9Q9UKV0 RNU6-205P-201ENST00000390858 107 ntBASIC1.27□□□□□ -2.21
HDAC9Q9UKV0 Y_RNA.586-201ENST00000391146 98 ntBASIC1.27□□□□□ -2.21
HDAC9Q9UKV0 AC063976.4-201ENST00000421971 163 ntBASIC1.27□□□□□ -2.21
HDAC9Q9UKV0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.27□□□□□ -2.21
HDAC9Q9UKV0 RNU6-1258P-201ENST00000516911 111 ntBASIC1.27□□□□□ -2.21
HDAC9Q9UKV0 AC133485.4-201ENST00000561835 220 ntBASIC1.27□□□□□ -2.21
HDAC9Q9UKV0 AC138907.4-201ENST00000570107 226 ntBASIC1.27□□□□□ -2.21
HDAC9Q9UKV0 Y_RNA.757-201ENST00000578934 114 ntBASIC1.27□□□□□ -2.21
HDAC9Q9UKV0 AP000753.3-201ENST00000604083 169 ntBASIC1.27□□□□□ -2.21
HDAC9Q9UKV0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
HDAC9Q9UKV0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
HDAC9Q9UKV0 MIR373-201ENST00000362273 69 ntBASIC1.26□□□□□ -2.21
HDAC9Q9UKV0 Y_RNA.114-201ENST00000363265 113 ntBASIC1.26□□□□□ -2.21
HDAC9Q9UKV0 RNU6-704P-201ENST00000364162 103 ntBASIC1.26□□□□□ -2.21
HDAC9Q9UKV0 SNORD12C-201ENST00000386307 89 ntBASIC1.26□□□□□ -2.21
HDAC9Q9UKV0 AL603908.1-201ENST00000406098 201 ntBASIC1.26□□□□□ -2.21
HDAC9Q9UKV0 MIR4305-201ENST00000583252 102 ntBASIC1.26□□□□□ -2.21
HDAC9Q9UKV0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.26□□□□□ -2.21
HDAC9Q9UKV0 MIR6740-201ENST00000618268 113 ntBASIC1.26□□□□□ -2.21
HDAC9Q9UKV0 MRPL35P3-201ENST00000421557 364 ntBASIC1.25□□□□□ -2.21
HDAC9Q9UKV0 RNU5E-3P-201ENST00000515913 68 ntBASIC1.25□□□□□ -2.21
HDAC9Q9UKV0 RNU2-35P-201ENST00000516446 142 ntBASIC1.25□□□□□ -2.21
HDAC9Q9UKV0 IGKV1-22-201ENST00000524313 326 ntBASIC1.25□□□□□ -2.21
HDAC9Q9UKV0 AC023827.1-201ENST00000569247 97 ntBASIC1.25□□□□□ -2.21
HDAC9Q9UKV0 SNORD114-21-201ENST00000606412 72 ntBASIC1.25□□□□□ -2.21
HDAC9Q9UKV0 AC106800.4-201ENST00000614905 153 ntBASIC1.25□□□□□ -2.21
HDAC9Q9UKV0 TUG1_4.1-201ENST00000619464 181 ntBASIC1.25□□□□□ -2.21
HDAC9Q9UKV0 Y_RNA.171-201ENST00000363760 102 ntBASIC1.24□□□□□ -2.21
HDAC9Q9UKV0 SNORD113.3-201ENST00000364630 78 ntBASIC1.24□□□□□ -2.21
HDAC9Q9UKV0 MIR1285-1-201ENST00000408593 84 ntBASIC1.24□□□□□ -2.21
HDAC9Q9UKV0 RPS29P28-201ENST00000446439 141 ntBASIC1.24□□□□□ -2.21
HDAC9Q9UKV0 RNU6-893P-201ENST00000458841 100 ntBASIC1.24□□□□□ -2.21
HDAC9Q9UKV0 snoU13.2-201ENST00000459201 104 ntBASIC1.24□□□□□ -2.21
HDAC9Q9UKV0 UBL5P1-201ENST00000507979 193 ntBASIC1.24□□□□□ -2.21
HDAC9Q9UKV0 AC021443.1-201ENST00000604478 211 ntBASIC1.24□□□□□ -2.21
HDAC9Q9UKV0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
HDAC9Q9UKV0 SNORA2B-201ENST00000384583 137 ntBASIC1.23□□□□□ -2.21
HDAC9Q9UKV0 MIR563-201ENST00000385080 79 ntBASIC1.23□□□□□ -2.21
HDAC9Q9UKV0 AL158147.1-201ENST00000443970 75 ntBASIC1.23□□□□□ -2.21
HDAC9Q9UKV0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.23□□□□□ -2.21
HDAC9Q9UKV0 uc_338.6-201ENST00000613544 171 ntBASIC1.23□□□□□ -2.21
HDAC9Q9UKV0 AL137067.1-201ENST00000615933 120 ntBASIC1.23□□□□□ -2.21
HDAC9Q9UKV0 MIR588-201ENST00000384900 83 ntBASIC1.22□□□□□ -2.21
HDAC9Q9UKV0 SNORD111-201ENST00000408139 94 ntBASIC1.22□□□□□ -2.21
HDAC9Q9UKV0 AL022718.1-201ENST00000412004 84 ntBASIC1.22□□□□□ -2.21
HDAC9Q9UKV0 AL512326.2-201ENST00000426359 151 ntBASIC1.22□□□□□ -2.21
HDAC9Q9UKV0 RNU7-62P-201ENST00000458856 62 ntBASIC1.22□□□□□ -2.21
HDAC9Q9UKV0 RNU7-123P-201ENST00000515911 60 ntBASIC1.22□□□□□ -2.21
HDAC9Q9UKV0 MIR4661-201ENST00000582720 75 ntBASIC1.22□□□□□ -2.21
HDAC9Q9UKV0 MIR6857-201ENST00000613267 93 ntBASIC1.22□□□□□ -2.21
HDAC9Q9UKV0 MIR924-201ENST00000638017 53 ntBASIC1.22□□□□□ -2.21
HDAC9Q9UKV0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
HDAC9Q9UKV0 SNORD115-2-201ENST00000362842 82 ntBASIC1.21□□□□□ -2.22
HDAC9Q9UKV0 RNU6-647P-201ENST00000364243 107 ntBASIC1.21□□□□□ -2.22
HDAC9Q9UKV0 RNU4-38P-201ENST00000364472 129 ntBASIC1.21□□□□□ -2.22
HDAC9Q9UKV0 SNORD115-20-201ENST00000365099 82 ntBASIC1.21□□□□□ -2.22
HDAC9Q9UKV0 Y_RNA.617-201ENST00000410920 90 ntBASIC1.21□□□□□ -2.22
HDAC9Q9UKV0 RNU7-164P-201ENST00000459221 62 ntBASIC1.21□□□□□ -2.22
HDAC9Q9UKV0 AC113410.1-201ENST00000505029 247 ntBASIC1.21□□□□□ -2.22
HDAC9Q9UKV0 RNU6-94P-201ENST00000607728 107 ntBASIC1.21□□□□□ -2.22
HDAC9Q9UKV0 Y_RNA.298-201ENST00000364960 107 ntBASIC1.2□□□□□ -2.22
HDAC9Q9UKV0 Y_RNA.470-201ENST00000384307 117 ntBASIC1.2□□□□□ -2.22
HDAC9Q9UKV0 MIR200A-201ENST00000384875 90 ntBASIC1.2□□□□□ -2.22
HDAC9Q9UKV0 snoU13.21-201ENST00000459368 105 ntBASIC1.2□□□□□ -2.22
HDAC9Q9UKV0 RNU6-971P-201ENST00000516920 106 ntBASIC1.2□□□□□ -2.22
HDAC9Q9UKV0 AC004812.1-201ENST00000540773 146 ntBASIC1.2□□□□□ -2.22
HDAC9Q9UKV0 Y_RNA.85-201ENST00000363014 111 ntBASIC1.19□□□□□ -2.22
HDAC9Q9UKV0 Y_RNA.531-201ENST00000384589 121 ntBASIC1.19□□□□□ -2.22
HDAC9Q9UKV0 MIR532-201ENST00000385025 91 ntBASIC1.19□□□□□ -2.22
HDAC9Q9UKV0 RNU6-1165P-201ENST00000410119 107 ntBASIC1.19□□□□□ -2.22
HDAC9Q9UKV0 RNU7-113P-201ENST00000459273 62 ntBASIC1.19□□□□□ -2.22
HDAC9Q9UKV0 RN7SKP19-201ENST00000516016 252 ntBASIC1.19□□□□□ -2.22
HDAC9Q9UKV0 RNY4P20-201ENST00000516678 93 ntBASIC1.19□□□□□ -2.22
HDAC9Q9UKV0 MIR3973-201ENST00000579824 107 ntBASIC1.19□□□□□ -2.22
HDAC9Q9UKV0 MIR30D-201ENST00000362283 70 ntBASIC1.18□□□□□ -2.22
HDAC9Q9UKV0 SNORD114-24-201ENST00000365029 72 ntBASIC1.18□□□□□ -2.22
HDAC9Q9UKV0 MIR539-201ENST00000365690 78 ntBASIC1.18□□□□□ -2.22
HDAC9Q9UKV0 SNORD124-201ENST00000459577 104 ntBASIC1.18□□□□□ -2.22
HDAC9Q9UKV0 RNU6-235P-201ENST00000362644 107 ntBASIC1.17□□□□□ -2.22
HDAC9Q9UKV0 SNORD114-23-201ENST00000363536 72 ntBASIC1.17□□□□□ -2.22
HDAC9Q9UKV0 SNORA18-201ENST00000384416 132 ntBASIC1.17□□□□□ -2.22
HDAC9Q9UKV0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.17□□□□□ -2.22
HDAC9Q9UKV0 RNU6-1211P-201ENST00000459179 105 ntBASIC1.17□□□□□ -2.22
HDAC9Q9UKV0 RNA5SP330-201ENST00000517096 96 ntBASIC1.17□□□□□ -2.22
HDAC9Q9UKV0 AL662814.1-201ENST00000617364 121 ntBASIC1.17□□□□□ -2.22
HDAC9Q9UKV0 AL109933.3-201ENST00000619095 188 ntBASIC1.17□□□□□ -2.22
HDAC9Q9UKV0 Y_RNA.218-201ENST00000364218 104 ntBASIC1.16□□□□□ -2.22
HDAC9Q9UKV0 TMSB4XP3-201ENST00000445144 114 ntBASIC1.16□□□□□ -2.22
HDAC9Q9UKV0 RNU6-781P-201ENST00000516377 101 ntBASIC1.16□□□□□ -2.22
HDAC9Q9UKV0 AC022523.2-201ENST00000561045 150 ntBASIC1.16□□□□□ -2.22
HDAC9Q9UKV0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.16□□□□□ -2.22
HDAC9Q9UKV0 RNU6-369P-201ENST00000362515 102 ntBASIC1.15□□□□□ -2.23
HDAC9Q9UKV0 RNU6-1104P-201ENST00000384723 104 ntBASIC1.15□□□□□ -2.23
HDAC9Q9UKV0 RNU6-1237P-201ENST00000384777 107 ntBASIC1.15□□□□□ -2.23
HDAC9Q9UKV0 MIRLET7F2-201ENST00000385277 83 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms