Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 RNU6-1104P-201ENST00000384723 104 ntBASIC1.02□□□□□ -2.25
SIX4Q9UIU6 RNU6-1237P-201ENST00000384777 107 ntBASIC1.02□□□□□ -2.25
SIX4Q9UIU6 MIR1263-201ENST00000408324 86 ntBASIC1.02□□□□□ -2.25
SIX4Q9UIU6 OR2A41P-201ENST00000473586 105 ntBASIC1.02□□□□□ -2.25
SIX4Q9UIU6 RNU6-1061P-201ENST00000516530 99 ntBASIC1.02□□□□□ -2.25
SIX4Q9UIU6 MIR6504-201ENST00000613520 61 ntBASIC1.02□□□□□ -2.25
SIX4Q9UIU6 AC012676.2-201ENST00000619258 186 ntBASIC1.02□□□□□ -2.25
SIX4Q9UIU6 SNORD113.3-201ENST00000364630 78 ntBASIC1.01□□□□□ -2.25
SIX4Q9UIU6 RNU6-580P-201ENST00000365159 107 ntBASIC1.01□□□□□ -2.25
SIX4Q9UIU6 SNORD114-22-201ENST00000365423 72 ntBASIC1.01□□□□□ -2.25
SIX4Q9UIU6 SNORA18-201ENST00000384416 132 ntBASIC1.01□□□□□ -2.25
SIX4Q9UIU6 Y_RNA.630-201ENST00000411370 108 ntBASIC1.01□□□□□ -2.25
SIX4Q9UIU6 MIR3973-201ENST00000579824 107 ntBASIC1.01□□□□□ -2.25
SIX4Q9UIU6 MIR548AE2-201ENST00000583456 67 ntBASIC1.01□□□□□ -2.25
SIX4Q9UIU6 AC106800.4-201ENST00000614905 153 ntBASIC1.01□□□□□ -2.25
SIX4Q9UIU6 SNORD115-2-201ENST00000362842 82 ntBASIC1□□□□□ -2.25
SIX4Q9UIU6 SNORD115-20-201ENST00000365099 82 ntBASIC1□□□□□ -2.25
SIX4Q9UIU6 SNORA32-201ENST00000384072 121 ntBASIC1□□□□□ -2.25
SIX4Q9UIU6 MIR532-201ENST00000385025 91 ntBASIC1□□□□□ -2.25
SIX4Q9UIU6 MIR563-201ENST00000385080 79 ntBASIC1□□□□□ -2.25
SIX4Q9UIU6 MIRLET7F2-201ENST00000385277 83 ntBASIC1□□□□□ -2.25
SIX4Q9UIU6 MT-TI-201ENST00000387365 69 ntBASIC1□□□□□ -2.25
SIX4Q9UIU6 RNU6-1165P-201ENST00000410119 107 ntBASIC1□□□□□ -2.25
SIX4Q9UIU6 RNA5SP33-201ENST00000516687 98 ntBASIC1□□□□□ -2.25
SIX4Q9UIU6 RNA5SP404-201ENST00000517118 132 ntBASIC1□□□□□ -2.25
SIX4Q9UIU6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1□□□□□ -2.25
SIX4Q9UIU6 RNU1-124P-201ENST00000363861 145 ntBASIC0.99□□□□□ -2.25
SIX4Q9UIU6 SNORA25.9-201ENST00000365087 128 ntBASIC0.99□□□□□ -2.25
SIX4Q9UIU6 SNORD116-14-201ENST00000383894 92 ntBASIC0.99□□□□□ -2.25
SIX4Q9UIU6 SNORD116-17-201ENST00000383929 92 ntBASIC0.99□□□□□ -2.25
SIX4Q9UIU6 SNORD116-15-201ENST00000384445 92 ntBASIC0.99□□□□□ -2.25
SIX4Q9UIU6 SNORD116-19-201ENST00000384729 92 ntBASIC0.99□□□□□ -2.25
SIX4Q9UIU6 SNORD83.1-201ENST00000411362 77 ntBASIC0.99□□□□□ -2.25
SIX4Q9UIU6 AC015818.7-201ENST00000428754 109 ntBASIC0.99□□□□□ -2.25
SIX4Q9UIU6 AC087499.7-201ENST00000441958 109 ntBASIC0.99□□□□□ -2.25
SIX4Q9UIU6 MIR1270-201ENST00000459320 83 ntBASIC0.99□□□□□ -2.25
SIX4Q9UIU6 RNU6-659P-201ENST00000516454 104 ntBASIC0.99□□□□□ -2.25
SIX4Q9UIU6 RNU6-406P-201ENST00000516470 107 ntBASIC0.99□□□□□ -2.25
SIX4Q9UIU6 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
SIX4Q9UIU6 AL662814.1-201ENST00000617364 121 ntBASIC0.99□□□□□ -2.25
SIX4Q9UIU6 AL391516.1-201ENST00000554380 2449 ntBASIC0.99□□□□□ -2.25
SIX4Q9UIU6 MIR30D-201ENST00000362283 70 ntBASIC0.98□□□□□ -2.25
SIX4Q9UIU6 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
SIX4Q9UIU6 Y_RNA.528-201ENST00000384575 108 ntBASIC0.98□□□□□ -2.25
SIX4Q9UIU6 SNORA22C-201ENST00000384614 134 ntBASIC0.98□□□□□ -2.25
SIX4Q9UIU6 MIR19B1-201ENST00000384829 87 ntBASIC0.98□□□□□ -2.25
SIX4Q9UIU6 SNORD111-201ENST00000408139 94 ntBASIC0.98□□□□□ -2.25
SIX4Q9UIU6 RNU6-1333P-201ENST00000516162 93 ntBASIC0.98□□□□□ -2.25
SIX4Q9UIU6 AC025166.1-201ENST00000612411 163 ntBASIC0.98□□□□□ -2.25
SIX4Q9UIU6 AL365222.1-201ENST00000614661 98 ntBASIC0.98□□□□□ -2.25
SIX4Q9UIU6 AL157777.2-201ENST00000258070 137 ntBASIC0.97□□□□□ -2.25
SIX4Q9UIU6 Y_RNA.127-201ENST00000363386 109 ntBASIC0.97□□□□□ -2.25
SIX4Q9UIU6 Y_RNA.261-201ENST00000364631 102 ntBASIC0.97□□□□□ -2.25
SIX4Q9UIU6 MIR499A-201ENST00000384903 122 ntBASIC0.97□□□□□ -2.25
SIX4Q9UIU6 RNA5SP237-201ENST00000410414 113 ntBASIC0.97□□□□□ -2.25
SIX4Q9UIU6 RNU6-735P-201ENST00000410612 107 ntBASIC0.97□□□□□ -2.25
SIX4Q9UIU6 RNA5SP136-201ENST00000410906 107 ntBASIC0.97□□□□□ -2.25
SIX4Q9UIU6 SNORD124-201ENST00000459577 104 ntBASIC0.97□□□□□ -2.25
SIX4Q9UIU6 Y_RNA.712-201ENST00000517011 92 ntBASIC0.97□□□□□ -2.25
SIX4Q9UIU6 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.97□□□□□ -2.25
SIX4Q9UIU6 AC141846.1-201ENST00000568348 142 ntBASIC0.97□□□□□ -2.25
SIX4Q9UIU6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
SIX4Q9UIU6 Y_RNA.226-201ENST00000364337 114 ntBASIC0.96□□□□□ -2.26
SIX4Q9UIU6 SNORD113-1-201ENST00000365321 69 ntBASIC0.96□□□□□ -2.26
SIX4Q9UIU6 MIR520E-201ENST00000384867 87 ntBASIC0.96□□□□□ -2.26
SIX4Q9UIU6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.96□□□□□ -2.26
SIX4Q9UIU6 RNU6-994P-201ENST00000410507 111 ntBASIC0.96□□□□□ -2.26
SIX4Q9UIU6 RNU4-69P-201ENST00000410677 143 ntBASIC0.96□□□□□ -2.26
SIX4Q9UIU6 COX6CP6-201ENST00000490840 228 ntBASIC0.96□□□□□ -2.26
SIX4Q9UIU6 UBL5P1-201ENST00000507979 193 ntBASIC0.96□□□□□ -2.26
SIX4Q9UIU6 RNU6-789P-201ENST00000517105 102 ntBASIC0.96□□□□□ -2.26
SIX4Q9UIU6 RNU7-35P-201ENST00000517174 62 ntBASIC0.96□□□□□ -2.26
SIX4Q9UIU6 MIR3914-2-201ENST00000637339 95 ntBASIC0.96□□□□□ -2.26
SIX4Q9UIU6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SIX4Q9UIU6 MTND5P18-201ENST00000445624 1801 ntBASIC0.96□□□□□ -2.26
SIX4Q9UIU6 Y_RNA.198-201ENST00000364013 98 ntBASIC0.95□□□□□ -2.26
SIX4Q9UIU6 RNY1P13-201ENST00000365030 105 ntBASIC0.95□□□□□ -2.26
SIX4Q9UIU6 SNORA19-201ENST00000384737 128 ntBASIC0.95□□□□□ -2.26
SIX4Q9UIU6 RNU6-1086P-201ENST00000410930 100 ntBASIC0.95□□□□□ -2.26
SIX4Q9UIU6 SNORD33.1-201ENST00000516213 88 ntBASIC0.95□□□□□ -2.26
SIX4Q9UIU6 MIR4771-2-201ENST00000577758 74 ntBASIC0.95□□□□□ -2.26
SIX4Q9UIU6 MIR4698-201ENST00000577795 80 ntBASIC0.95□□□□□ -2.26
SIX4Q9UIU6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.95□□□□□ -2.26
SIX4Q9UIU6 MIR4771-1-201ENST00000582617 74 ntBASIC0.95□□□□□ -2.26
SIX4Q9UIU6 FAM71BP1-201ENST00000604431 523 ntBASIC0.95□□□□□ -2.26
SIX4Q9UIU6 RNU6-369P-201ENST00000362515 102 ntBASIC0.94□□□□□ -2.26
SIX4Q9UIU6 RNU6-934P-201ENST00000365154 107 ntBASIC0.94□□□□□ -2.26
SIX4Q9UIU6 RNU6-22P-201ENST00000384355 107 ntBASIC0.94□□□□□ -2.26
SIX4Q9UIU6 RNU6-1117P-201ENST00000384525 104 ntBASIC0.94□□□□□ -2.26
SIX4Q9UIU6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.94□□□□□ -2.26
SIX4Q9UIU6 AC008267.6-201ENST00000441664 139 ntBASIC0.94□□□□□ -2.26
SIX4Q9UIU6 RNU7-79P-201ENST00000516082 62 ntBASIC0.94□□□□□ -2.26
SIX4Q9UIU6 SNORA4-201ENST00000584302 138 ntBASIC0.94□□□□□ -2.26
SIX4Q9UIU6 MIR6857-201ENST00000613267 93 ntBASIC0.94□□□□□ -2.26
SIX4Q9UIU6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
SIX4Q9UIU6 AL589743.1-201ENST00000551932 2712 ntBASIC0.94□□□□□ -2.26
SIX4Q9UIU6 Y_RNA.191-201ENST00000363972 113 ntBASIC0.93□□□□□ -2.26
SIX4Q9UIU6 Y_RNA.213-201ENST00000364178 111 ntBASIC0.93□□□□□ -2.26
SIX4Q9UIU6 Y_RNA.299-201ENST00000364973 94 ntBASIC0.93□□□□□ -2.26
SIX4Q9UIU6 MT-TF-201ENST00000387314 71 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms